FFCP PHASE1:Mm9::chr9:34296406..34296420,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=67703|HGNC=|MCL_coexpression_id=580|UniProt=Q8BR86|association_with_transcript=90bp_to_NM_001190911,NM_001190912,NM_001190913,NM_001190914,NM_026324_5end|description=CAGE_peak_2_at_Kirrel3_5end|id=chr9:34296406..34296420,+|ontology_enrichment_celltype=CL:0000540!1.53e-13!33;CL:0000047!1.53e-13!33;CL:0000031!1.53e-13!33;CL:0000404!1.53e-13!33;CL:0000117!2.05e-13!23;CL:0000337!2.05e-13!23;CL:0000221!1.39e-12!44;CL:0000133!1.39e-12!44;CL:0002319!3.85e-12!43;CL:0000393!4.00e-10!39;CL:0000211!4.00e-10!39;CL:0000055!6.83e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.01e-16,23;CL:0000337,2.01e-16,23;CL:0000540,1.45e-15,33;CL:0000047,1.45e-15,33;CL:0000031,1.45e-15,33;CL:0000404,1.45e-15,33;CL:0000221,2.02e-13,44;CL:0000133,2.02e-13,44;CL:0002319,6.91e-13,43;CL:0000393,2.74e-11,39;CL:0000211,2.74e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.78e-29!73;UBERON:0005743!1.78e-29!73;UBERON:0000073!8.76e-29!75;UBERON:0001016!8.76e-29!75;UBERON:0004121!6.00e-26!102;UBERON:0000924!6.00e-26!102;UBERON:0006601!6.00e-26!102;UBERON:0000033!2.77e-24!63;UBERON:0001049!6.07e-24!52;UBERON:0005068!6.07e-24!52;UBERON:0006241!6.07e-24!52;UBERON:0007135!6.07e-24!52;UBERON:0002346!2.57e-23!71;UBERON:0003075!2.57e-23!71;UBERON:0007284!2.57e-23!71;UBERON:0000955!3.17e-22!50;UBERON:0006238!3.17e-22!50;UBERON:0002616!1.81e-21!49;UBERON:0003056!1.05e-18!49;UBERON:0002020!6.98e-18!34;UBERON:0003080!2.05e-17!40;UBERON:0002780!9.75e-17!39;UBERON:0001890!9.75e-17!39;UBERON:0006240!9.75e-17!39;UBERON:0002791!6.73e-15!29;UBERON:0003528!6.73e-15!29;UBERON:0001893!6.73e-15!29;UBERON:0000153!1.80e-14!94;UBERON:0007811!2.63e-13!86;UBERON:0000956!1.88e-10!21;UBERON:0001869!1.88e-10!21;UBERON:0000203!1.88e-10!21;UBERON:0002619!5.00e-08!17;UBERON:0000468!7.14e-08!333;UBERON:0002021!3.28e-07!10;UBERON:0000411!3.28e-07!10;UBERON:0001950!3.28e-07!10;UBERON:0003076!3.69e-07!12;UBERON:0003057!3.69e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.48e-35,73;UBERON:0001016,3.24e-33,75;UBERON:0002346,7.48e-31,64;UBERON:0003075,7.48e-31,64;UBERON:0007284,7.48e-31,64;UBERON:0004121,1.77e-30,95;UBERON:0000924,1.77e-30,95;UBERON:0006601,1.77e-30,95;UBERON:0000073,6.03e-30,54;UBERON:0001049,4.74e-29,52;UBERON:0005068,4.74e-29,52;UBERON:0006241,4.74e-29,52;UBERON:0007135,4.74e-29,52;UBERON:0010371,1.22e-27,73;UBERON:0000955,3.35e-25,47;UBERON:0006238,3.35e-25,47;UBERON:0002616,2.88e-24,46;UBERON:0002020,3.12e-22,34;UBERON:0003056,3.12e-22,49;UBERON:0003080,1.25e-21,40;UBERON:0002780,8.92e-21,39;UBERON:0001890,8.92e-21,39;UBERON:0006240,8.92e-21,39;UBERON:0003528,1.76e-18,29;UBERON:0002791,1.76e-18,29;UBERON:0001893,1.76e-18,29;UBERON:0010314,1.47e-16,92;UBERON:0000956,6.77e-13,21;UBERON:0001869,6.77e-13,21;UBERON:0000203,6.77e-13,21;UBERON:0002619,7.56e-10,17;UBERON:0002021,1.19e-08,10;UBERON:0000411,1.19e-08,10;UBERON:0001950,1.19e-08,10;UBERON:0003076,8.10e-08,12;UBERON:0003057,8.10e-08,12;UBERON:0002420,7.93e-07,8;UBERON:0007245,7.93e-07,8;UBERON:0010009,7.93e-07,8;UBERON:0010011,7.93e-07,8;UBERON:0000454,7.93e-07,8|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.811015449756117,0.183546752161682,0.782391344348039,1.74420125104357,0.219686182734472,0,1.1198913730029,2.87505128729943,0,0,0,0,0,0,6.06949382578793,11.6378015439847,5.07065122804943,1.69422266034566,0,0,0,0,1.79760066311043,3.45796474789399,14.2054768862614,15.7956947848078,11.9885227970288,15.4251531578054,12.589506834242,11.1466627285608,9.29701068876893,10.1114066527102,3.30347642998166,7.40586560894089,8.60196586234964,11.8697658957174,11.618930737506,10.939180781692,10.8881369610539,6.75315132038016,7.79271063661732,11.490514833473,8.54230084794618,8.57437450796383,0.302904773332736,0.529000920747499,0,0,0,0,0,0,0.842666520790511,0,0,0,7.18301440861071,2.56652954828636,2.54805239706646,0,0,0,0,0.45673551887624,1.03575153458869,0.148442139064825,1.90833859442749,0.304465478312141,0.461230994512117,0.150722640552623,0.587943535678524,0,0,0.578397427679647,0,0.808834249737046,0.220841518460394,0.484875253135222,0,33.9625724533395,85.6637030867031,0,0,0,0,14.5296920222678,8.23501085073528,24.8795617183472,10.9509321721134,13.8086346958378,12.4672826735736,15.2506787283692,0.611036183101898,0.373220911830279,0.505445516867349,3.15662783829711,0.390361328888111,0.689706313300419,1.26043490863744,1.9591626318643,2.9255694635071,3.97152532883034,4.49768277886698,7.50239775143145,0.431135985865684,3.59301552318857,5.27853372491847,3.06874025398605,4.72680323683516,0.696504333044333,0.411564272815887,1.19420560091096,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0.393528463494808,0.617068451549513,0.930135779001631,0.804820204198858,0,0.329119699826961,0.820837320395476,0.486412857275134,0.730999937126662,0.658650345873152,0.536825675041487,14.2997165023607,9.98174740079059,0,0,1.06644125267617,1.85789337488351,0.77320476793256,0.403367049246685,0.444756087689741,0.760902504450237,0,0.494096864172033,1.75934646160189,0.198956472041151,0.38992817423824,0,0,0,0.758671603812327,0.456994050438915,0,0.203651327845314,0.193952487167626,0.350679099451593,1.83385957660346,0,0.470996183524124,0.246794327843601,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.162964976442026,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,0.585400943573396,0.788175720530955,1.10732344824387,1.75400245523236,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,4.41498794087572,11.3990918891332,14.5342491374332,1.3114795630134,1.26235463602186,3.15508219416257,1.56175497718655,4.73931475012158,0.477937595905104,1.11399337041197,0.566153061577665,1.21443210502468,2.63030272120181,1.18586333383957,24.0990987316355,0.567760340833074,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,1.22974059177571,5.68542244970086,7.27067458955011,7.48644494607915,1.26414703174326,2.10837217149998,0,1.36175842301515,1.98067203434441,1.03486947026204,2.7863814554107,1.06404140185364,1.78368817602071,3.62007845324666,1.8267896946876,0.23467170806371,0,0,0.49465875882444,0.484393280087717,0.241251699712623,0.238744688006273,0.164140899745061,0.291480836629851,12.0526446306831,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.790839983952838,1.01659733563424,1.08005340821801,1.04544148007234,0.436725127492355,0.674321731924103,0.991841468704031,0.26175594198403,0.129614973291793,1.86401793926078,0,0.598066184175915,0.66183396182839,2.13896307178452,1.16243841129958,0.844780627453891,0.704143431874524,1.0416350787516,0.419437377702843,0,0.288030006257865,0.316011120628178,0.405450430580328,0.821687657318618,0.51968329191118,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0.453460767230423,0,0,0,0.579568782096571,0,0,0,0,15.8130515932779,13.3494318587081,20.0513429703789,17.8727309637435,10.2762377965596,9.82012066606611,10.1253375034771,10.8077088773813,8.60970577069989,9.31968561153276,0.415149390336707,3.19219898720825,4.26834014385335,4.61902762429759,2.51535795153579,1.65459157605013,4.66718128383392,3.29656091582231,2.24643446714271,3.03236654116557,2.28131369901216,2.26351609663291,3.7456602987953,3.90553429669703,4.36509564062661,5.23923060411381,4.28772005995965,4.05109362973781,2.88460130562315,3.82717192349433,3.77156177623957,2.30718548007139,4.76872379894642,4.79643174886684,3.3879376949519,4.73841804193388,4.024415403201,2.36762740294059,3.53090695999241,5.61142271657738,3.08451047122853,3.54616136552028,2.45538625901814,2.94379998253335,2.89359916471712,6.49507502638659,2.33931608445408,2.57845264857958,2.86932498103265,0.882365676478062,0.695603506861264|short_description=p2@Kirrel3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67703 | |||
|HGNC= | |||
|MCL_coexpression_id=580 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BR86 | |||
|association_with_transcript=90bp_to_NM_001190911,NM_001190912,NM_001190913,NM_001190914,NM_026324_5end | |||
|cluster_id=chr9:34296406..34296420,+ | |||
|description=CAGE_peak_2_at_Kirrel3_5end | |||
|id=chr9:34296406..34296420,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.53e-13!33;CL:0000047!1.53e-13!33;CL:0000031!1.53e-13!33;CL:0000404!1.53e-13!33;CL:0000117!2.05e-13!23;CL:0000337!2.05e-13!23;CL:0000221!1.39e-12!44;CL:0000133!1.39e-12!44;CL:0002319!3.85e-12!43;CL:0000393!4.00e-10!39;CL:0000211!4.00e-10!39;CL:0000055!6.83e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.01e-16,23;CL:0000337,2.01e-16,23;CL:0000540,1.45e-15,33;CL:0000047,1.45e-15,33;CL:0000031,1.45e-15,33;CL:0000404,1.45e-15,33;CL:0000221,2.02e-13,44;CL:0000133,2.02e-13,44;CL:0002319,6.91e-13,43;CL:0000393,2.74e-11,39;CL:0000211,2.74e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-29!73;UBERON:0005743!1.78e-29!73;UBERON:0000073!8.76e-29!75;UBERON:0001016!8.76e-29!75;UBERON:0004121!6.00e-26!102;UBERON:0000924!6.00e-26!102;UBERON:0006601!6.00e-26!102;UBERON:0000033!2.77e-24!63;UBERON:0001049!6.07e-24!52;UBERON:0005068!6.07e-24!52;UBERON:0006241!6.07e-24!52;UBERON:0007135!6.07e-24!52;UBERON:0002346!2.57e-23!71;UBERON:0003075!2.57e-23!71;UBERON:0007284!2.57e-23!71;UBERON:0000955!3.17e-22!50;UBERON:0006238!3.17e-22!50;UBERON:0002616!1.81e-21!49;UBERON:0003056!1.05e-18!49;UBERON:0002020!6.98e-18!34;UBERON:0003080!2.05e-17!40;UBERON:0002780!9.75e-17!39;UBERON:0001890!9.75e-17!39;UBERON:0006240!9.75e-17!39;UBERON:0002791!6.73e-15!29;UBERON:0003528!6.73e-15!29;UBERON:0001893!6.73e-15!29;UBERON:0000153!1.80e-14!94;UBERON:0007811!2.63e-13!86;UBERON:0000956!1.88e-10!21;UBERON:0001869!1.88e-10!21;UBERON:0000203!1.88e-10!21;UBERON:0002619!5.00e-08!17;UBERON:0000468!7.14e-08!333;UBERON:0002021!3.28e-07!10;UBERON:0000411!3.28e-07!10;UBERON:0001950!3.28e-07!10;UBERON:0003076!3.69e-07!12;UBERON:0003057!3.69e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.48e-35,73;UBERON:0001016,3.24e-33,75;UBERON:0002346,7.48e-31,64;UBERON:0003075,7.48e-31,64;UBERON:0007284,7.48e-31,64;UBERON:0004121,1.77e-30,95;UBERON:0000924,1.77e-30,95;UBERON:0006601,1.77e-30,95;UBERON:0000073,6.03e-30,54;UBERON:0001049,4.74e-29,52;UBERON:0005068,4.74e-29,52;UBERON:0006241,4.74e-29,52;UBERON:0007135,4.74e-29,52;UBERON:0010371,1.22e-27,73;UBERON:0000955,3.35e-25,47;UBERON:0006238,3.35e-25,47;UBERON:0002616,2.88e-24,46;UBERON:0002020,3.12e-22,34;UBERON:0003056,3.12e-22,49;UBERON:0003080,1.25e-21,40;UBERON:0002780,8.92e-21,39;UBERON:0001890,8.92e-21,39;UBERON:0006240,8.92e-21,39;UBERON:0003528,1.76e-18,29;UBERON:0002791,1.76e-18,29;UBERON:0001893,1.76e-18,29;UBERON:0010314,1.47e-16,92;UBERON:0000956,6.77e-13,21;UBERON:0001869,6.77e-13,21;UBERON:0000203,6.77e-13,21;UBERON:0002619,7.56e-10,17;UBERON:0002021,1.19e-08,10;UBERON:0000411,1.19e-08,10;UBERON:0001950,1.19e-08,10;UBERON:0003076,8.10e-08,12;UBERON:0003057,8.10e-08,12;UBERON:0002420,7.93e-07,8;UBERON:0007245,7.93e-07,8;UBERON:0010009,7.93e-07,8;UBERON:0010011,7.93e-07,8;UBERON:0000454,7.93e-07,8 | |||
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.811015449756117,0.183546752161682,0.782391344348039,1.74420125104357,0.219686182734472,0,1.1198913730029,2.87505128729943,0,0,0,0,0,0,6.06949382578793,11.6378015439847,5.07065122804943,1.69422266034566,0,0,0,0,1.79760066311043,3.45796474789399,14.2054768862614,15.7956947848078,11.9885227970288,15.4251531578054,12.589506834242,11.1466627285608,9.29701068876893,10.1114066527102,3.30347642998166,7.40586560894089,8.60196586234964,11.8697658957174,11.618930737506,10.939180781692,10.8881369610539,6.75315132038016,7.79271063661732,11.490514833473,8.54230084794618,8.57437450796383,0.302904773332736,0.529000920747499,0,0,0,0,0,0,0.842666520790511,0,0,0,7.18301440861071,2.56652954828636,2.54805239706646,0,0,0,0,0.45673551887624,1.03575153458869,0.148442139064825,1.90833859442749,0.304465478312141,0.461230994512117,0.150722640552623,0.587943535678524,0,0,0.578397427679647,0,0.808834249737046,0.220841518460394,0.484875253135222,0,33.9625724533395,85.6637030867031,0,0,0,0,14.5296920222678,8.23501085073528,24.8795617183472,10.9509321721134,13.8086346958378,12.4672826735736,15.2506787283692,0.611036183101898,0.373220911830279,0.505445516867349,3.15662783829711,0.390361328888111,0.689706313300419,1.26043490863744,1.9591626318643,2.9255694635071,3.97152532883034,4.49768277886698,7.50239775143145,0.431135985865684,3.59301552318857,5.27853372491847,3.06874025398605,4.72680323683516,0.696504333044333,0.411564272815887,1.19420560091096,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0.393528463494808,0.617068451549513,0.930135779001631,0.804820204198858,0,0.329119699826961,0.820837320395476,0.486412857275134,0.730999937126662,0.658650345873152,0.536825675041487,14.2997165023607,9.98174740079059,0,0,1.06644125267617,1.85789337488351,0.77320476793256,0.403367049246685,0.444756087689741,0.760902504450237,0,0.494096864172033,1.75934646160189,0.198956472041151,0.38992817423824,0,0,0,0.758671603812327,0.456994050438915,0,0.203651327845314,0.193952487167626,0.350679099451593,1.83385957660346,0,0.470996183524124,0.246794327843601,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.162964976442026,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,0.585400943573396,0.788175720530955,1.10732344824387,1.75400245523236,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,4.41498794087572,11.3990918891332,14.5342491374332,1.3114795630134,1.26235463602186,3.15508219416257,1.56175497718655,4.73931475012158,0.477937595905104,1.11399337041197,0.566153061577665,1.21443210502468,2.63030272120181,1.18586333383957,24.0990987316355,0.567760340833074,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,1.22974059177571,5.68542244970086,7.27067458955011,7.48644494607915,1.26414703174326,2.10837217149998,0,1.36175842301515,1.98067203434441,1.03486947026204,2.7863814554107,1.06404140185364,1.78368817602071,3.62007845324666,1.8267896946876,0.23467170806371,0,0,0.49465875882444,0.484393280087717,0.241251699712623,0.238744688006273,0.164140899745061,0.291480836629851,12.0526446306831,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.790839983952838,1.01659733563424,1.08005340821801,1.04544148007234,0.436725127492355,0.674321731924103,0.991841468704031,0.26175594198403,0.129614973291793,1.86401793926078,0,0.598066184175915,0.66183396182839,2.13896307178452,1.16243841129958,0.844780627453891,0.704143431874524,1.0416350787516,0.419437377702843,0,0.288030006257865,0.316011120628178,0.405450430580328,0.821687657318618,0.51968329191118,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0.453460767230423,0,0,0,0.579568782096571,0,0,0,0,15.8130515932779,13.3494318587081,20.0513429703789,17.8727309637435,10.2762377965596,9.82012066606611,10.1253375034771,10.8077088773813,8.60970577069989,9.31968561153276,0.415149390336707,3.19219898720825,4.26834014385335,4.61902762429759,2.51535795153579,1.65459157605013,4.66718128383392,3.29656091582231,2.24643446714271,3.03236654116557,2.28131369901216,2.26351609663291,3.7456602987953,3.90553429669703,4.36509564062661,5.23923060411381,4.28772005995965,4.05109362973781,2.88460130562315,3.82717192349433,3.77156177623957,2.30718548007139,4.76872379894642,4.79643174886684,3.3879376949519,4.73841804193388,4.024415403201,2.36762740294059,3.53090695999241,5.61142271657738,3.08451047122853,3.54616136552028,2.45538625901814,2.94379998253335,2.89359916471712,6.49507502638659,2.33931608445408,2.57845264857958,2.86932498103265,0.882365676478062,0.695603506861264 | |||
|short_description=p2@Kirrel3 | |||
}} |
Revision as of 00:43, 5 August 2015
Short description: | p2@Kirrel3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kirrel3_5end |
Coexpression cluster: | MCL_coexpression_mm9:580 |
Association with transcript: | 90bp_to_NM_001190911, NM_001190912, NM_001190913, NM_001190914, NM_026324_5end |
EntrezGene: | 67703 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.01e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.01e-16 | 23 |
neuron | 1.45e-15 | 33 |
neuronal stem cell | 1.45e-15 | 33 |
neuroblast | 1.45e-15 | 33 |
electrically signaling cell | 1.45e-15 | 33 |
ectodermal cell | 2.02e-13 | 44 |
neurectodermal cell | 2.02e-13 | 44 |
neural cell | 6.91e-13 | 43 |
electrically responsive cell | 2.74e-11 | 39 |
electrically active cell | 2.74e-11 | 39 |