FFCP PHASE1:Mm9::chr6:117121494..117121505,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=390 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:117121494..117121505,+ | |||
|description=CAGE_peak_at_chr6:117121494..117121505,+ | |description=CAGE_peak_at_chr6:117121494..117121505,+ | ||
|id=chr6:117121494..117121505,+ | |id=chr6:117121494..117121505,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.08e-24,3;CL:0000359,4.08e-24,3;CL:0002539,4.08e-24,3;CL:0000514,4.08e-24,3;CL:0000680,2.07e-12,6;CL:0000187,2.07e-12,6;CL:0000056,2.07e-12,6;CL:0002293,3.98e-12,3;CL:0000222,1.00e-10,7;CL:0000355,1.79e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.08e-24,3;UBERON:0004237,4.08e-24,3;UBERON:0004695,4.08e-24,3;UBERON:0002111,4.08e-24,3;UBERON:0004178,4.08e-24,3;UBERON:0000947,2.83e-18,4;UBERON:0001637,2.83e-18,4;UBERON:0004573,2.83e-18,4;UBERON:0003509,2.83e-18,4;UBERON:0004571,2.83e-18,4;UBERON:0010191,2.83e-18,4;UBERON:0004572,2.83e-18,4;UBERON:0000055,9.25e-15,5;UBERON:0007500,9.25e-15,5;UBERON:0001981,9.25e-15,5;UBERON:0002049,9.25e-15,5;UBERON:0007798,9.25e-15,5;UBERON:0004537,9.25e-15,5;UBERON:0006965,9.25e-15,5;UBERON:0001134,1.79e-08,9;UBERON:0002036,1.79e-08,9;UBERON:0002385,1.79e-08,9;UBERON:0000486,1.79e-08,9;UBERON:0007503,1.79e-08,9;UBERON:0001015,1.79e-08,9;UBERON:0002329,1.79e-08,9;UBERON:0003082,1.79e-08,9;UBERON:0003059,1.79e-08,9;UBERON:0007282,1.79e-08,9;UBERON:0004290,1.79e-08,9;UBERON:0009618,1.79e-08,9;UBERON:0000383,1.11e-07,10;UBERON:0007524,4.97e-07,11;UBERON:0003077,4.97e-07,11;UBERON:0007285,4.97e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,2.73717714292689,2.75320128242522,3.12956537739216,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0.889294796111139,0.449949858640699,0,1.4209602298922,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,6.30592193538814,4.93593408745451,5.65343319216544,0,8.98285341900225,10.1922095882658,0,0,0,0,0.45673551887624,0.258937883647172,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.350679099451593,0,0,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0.341741761595705,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0.632022241256357,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0.476293691283074,0,0.38581844092741,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,2.73717714292689,2.75320128242522,3.12956537739216,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0.889294796111139,0.449949858640699,0,1.4209602298922,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,6.30592193538814,4.93593408745451,5.65343319216544,0,8.98285341900225,10.1922095882658,0,0,0,0,0.45673551887624,0.258937883647172,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.350679099451593,0,0,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0.341741761595705,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0.632022241256357,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0.476293691283074,0,0.38581844092741,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr6:117121494..117121505,+ | |short_description=p@chr6:117121494..117121505,+ | ||
}} | }} |
Latest revision as of 23:29, 4 August 2015
Short description: | p@chr6:117121494..117121505, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117121494..117121505, + |
Coexpression cluster: | MCL_coexpression_mm9:390 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.08e-24 | 3 |
vascular associated smooth muscle cell | 4.08e-24 | 3 |
aortic smooth muscle cell | 4.08e-24 | 3 |
smooth muscle myoblast | 4.08e-24 | 3 |
muscle precursor cell | 2.07e-12 | 6 |
muscle cell | 2.07e-12 | 6 |
myoblast | 2.07e-12 | 6 |
epithelial cell of thymus | 3.98e-12 | 3 |
mesodermal cell | 1.00e-10 | 7 |
multi-potent skeletal muscle stem cell | 1.79e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 4.08e-24 | 3 |
blood vessel smooth muscle | 4.08e-24 | 3 |
arterial system smooth muscle | 4.08e-24 | 3 |
artery smooth muscle tissue | 4.08e-24 | 3 |
aorta smooth muscle tissue | 4.08e-24 | 3 |
aorta | 2.83e-18 | 4 |
artery | 2.83e-18 | 4 |
systemic artery | 2.83e-18 | 4 |
arterial blood vessel | 2.83e-18 | 4 |
systemic arterial system | 2.83e-18 | 4 |
aortic system | 2.83e-18 | 4 |
arterial system | 2.83e-18 | 4 |
vessel | 9.25e-15 | 5 |
epithelial tube open at both ends | 9.25e-15 | 5 |
blood vessel | 9.25e-15 | 5 |
vasculature | 9.25e-15 | 5 |
vascular system | 9.25e-15 | 5 |
blood vasculature | 9.25e-15 | 5 |
vascular cord | 9.25e-15 | 5 |
skeletal muscle tissue | 1.79e-08 | 9 |
striated muscle tissue | 1.79e-08 | 9 |
muscle tissue | 1.79e-08 | 9 |
multilaminar epithelium | 1.79e-08 | 9 |
epithelial vesicle | 1.79e-08 | 9 |
musculature | 1.79e-08 | 9 |
somite | 1.79e-08 | 9 |
myotome | 1.79e-08 | 9 |
presomitic mesoderm | 1.79e-08 | 9 |
presumptive segmental plate | 1.79e-08 | 9 |
dermomyotome | 1.79e-08 | 9 |
trunk paraxial mesoderm | 1.79e-08 | 9 |
musculature of body | 1.11e-07 | 10 |
dense mesenchyme tissue | 4.97e-07 | 11 |
paraxial mesoderm | 4.97e-07 | 11 |
presumptive paraxial mesoderm | 4.97e-07 | 11 |