FFCP PHASE1:Mm9::chr10:85810108..85810124,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=323 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:85810108..85810124,+ | |||
|description=CAGE_peak_at_chr10:85810108..85810124,+ | |description=CAGE_peak_at_chr10:85810108..85810124,+ | ||
|id=chr10:85810108..85810124,+ | |id=chr10:85810108..85810124,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.03e-30,3;CL:0000359,4.03e-30,3;CL:0002539,4.03e-30,3;CL:0000514,4.03e-30,3;CL:0000680,1.13e-15,6;CL:0000187,1.13e-15,6;CL:0000056,1.13e-15,6;CL:0000222,1.34e-13,7;CL:0000217,5.17e-12,2;CL:0000328,5.17e-12,2;CL:0002573,5.17e-12,2;CL:0002376,5.17e-12,2;CL:0000218,5.17e-12,2;CL:0000692,5.17e-12,2;CL:0002377,5.17e-12,2;CL:0002375,5.17e-12,2;CL:0000355,8.07e-11,9;CL:0000215,1.88e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.03e-30,3;UBERON:0004237,4.03e-30,3;UBERON:0004695,4.03e-30,3;UBERON:0002111,4.03e-30,3;UBERON:0004178,4.03e-30,3;UBERON:0000947,6.55e-23,4;UBERON:0001637,6.55e-23,4;UBERON:0004573,6.55e-23,4;UBERON:0003509,6.55e-23,4;UBERON:0004571,6.55e-23,4;UBERON:0010191,6.55e-23,4;UBERON:0004572,6.55e-23,4;UBERON:0000055,1.42e-18,5;UBERON:0007500,1.42e-18,5;UBERON:0001981,1.42e-18,5;UBERON:0002049,1.42e-18,5;UBERON:0007798,1.42e-18,5;UBERON:0004537,1.42e-18,5;UBERON:0006965,1.42e-18,5;UBERON:0001134,8.07e-11,9;UBERON:0002036,8.07e-11,9;UBERON:0002385,8.07e-11,9;UBERON:0000486,8.07e-11,9;UBERON:0007503,8.07e-11,9;UBERON:0001015,8.07e-11,9;UBERON:0002329,8.07e-11,9;UBERON:0003082,8.07e-11,9;UBERON:0003059,8.07e-11,9;UBERON:0007282,8.07e-11,9;UBERON:0004290,8.07e-11,9;UBERON:0009618,8.07e-11,9;UBERON:0000383,7.63e-10,10;UBERON:0007524,4.82e-09,11;UBERON:0003077,4.82e-09,11;UBERON:0007285,4.82e-09,11 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.02753862439029,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0.230615497256059,0.150722640552623,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0.465067889500816,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0,0.316182685621286,0.590440591918409,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0.585400943573396,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,1.55416483679306,0.289298117163023,0,0,0,0,0,0,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.280924522409647,0,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.02753862439029,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0.230615497256059,0.150722640552623,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0.465067889500816,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0,0.316182685621286,0.590440591918409,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0.585400943573396,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,1.55416483679306,0.289298117163023,0,0,0,0,0,0,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.280924522409647,0,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:85810108..85810124,+ | |short_description=p@chr10:85810108..85810124,+ | ||
}} | }} |
Latest revision as of 23:08, 4 August 2015
Short description: | p@chr10:85810108..85810124, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85810108..85810124, + |
Coexpression cluster: | MCL_coexpression_mm9:323 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.03e-30 | 3 |
vascular associated smooth muscle cell | 4.03e-30 | 3 |
aortic smooth muscle cell | 4.03e-30 | 3 |
smooth muscle myoblast | 4.03e-30 | 3 |
muscle precursor cell | 1.13e-15 | 6 |
muscle cell | 1.13e-15 | 6 |
myoblast | 1.13e-15 | 6 |
mesodermal cell | 1.34e-13 | 7 |
insulating cell | 5.17e-12 | 2 |
myelin accumulating cell | 5.17e-12 | 2 |
Schwann cell | 5.17e-12 | 2 |
non-myelinating Schwann cell | 5.17e-12 | 2 |
myelinating Schwann cell;;Schwann cell | 5.17e-12 | 2 |
terminal Schwann cell | 5.17e-12 | 2 |
immature Schwann cell | 5.17e-12 | 2 |
Schwann cell precursor | 5.17e-12 | 2 |
multi-potent skeletal muscle stem cell | 8.07e-11 | 9 |
barrier cell | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 4.03e-30 | 3 |
blood vessel smooth muscle | 4.03e-30 | 3 |
arterial system smooth muscle | 4.03e-30 | 3 |
artery smooth muscle tissue | 4.03e-30 | 3 |
aorta smooth muscle tissue | 4.03e-30 | 3 |
aorta | 6.55e-23 | 4 |
artery | 6.55e-23 | 4 |
systemic artery | 6.55e-23 | 4 |
arterial blood vessel | 6.55e-23 | 4 |
systemic arterial system | 6.55e-23 | 4 |
aortic system | 6.55e-23 | 4 |
arterial system | 6.55e-23 | 4 |
vessel | 1.42e-18 | 5 |
epithelial tube open at both ends | 1.42e-18 | 5 |
blood vessel | 1.42e-18 | 5 |
vasculature | 1.42e-18 | 5 |
vascular system | 1.42e-18 | 5 |
blood vasculature | 1.42e-18 | 5 |
vascular cord | 1.42e-18 | 5 |
skeletal muscle tissue | 8.07e-11 | 9 |
striated muscle tissue | 8.07e-11 | 9 |
muscle tissue | 8.07e-11 | 9 |
multilaminar epithelium | 8.07e-11 | 9 |
epithelial vesicle | 8.07e-11 | 9 |
musculature | 8.07e-11 | 9 |
somite | 8.07e-11 | 9 |
myotome | 8.07e-11 | 9 |
presomitic mesoderm | 8.07e-11 | 9 |
presumptive segmental plate | 8.07e-11 | 9 |
dermomyotome | 8.07e-11 | 9 |
trunk paraxial mesoderm | 8.07e-11 | 9 |
musculature of body | 7.63e-10 | 10 |
dense mesenchyme tissue | 4.82e-09 | 11 |
paraxial mesoderm | 4.82e-09 | 11 |
presumptive paraxial mesoderm | 4.82e-09 | 11 |