FFCP PHASE1:Mm9::chr10:85808761..85808769,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:85808761..85808769,+ | |||
|description=CAGE_peak_at_chr10:85808761..85808769,+ | |description=CAGE_peak_at_chr10:85808761..85808769,+ | ||
|id=chr10:85808761..85808769,+ | |id=chr10:85808761..85808769,+ | ||
|ontology_enrichment_celltype=CL:0002453!3.43e-07!8;CL:0000333!4.25e-07!10;CL:0000095!4.25e-07!10;CL:0000243!4.25e-07!10;CL:0000123!4.25e-07!10;CL:0000125!4.25e-07!10;CL:0000030!4.25e-07!10;CL:0000339!4.25e-07!10 | |ontology_enrichment_celltype=CL:0002453!3.43e-07!8;CL:0000333!4.25e-07!10;CL:0000095!4.25e-07!10;CL:0000243!4.25e-07!10;CL:0000123!4.25e-07!10;CL:0000125!4.25e-07!10;CL:0000030!4.25e-07!10;CL:0000339!4.25e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.74e-24,3;CL:0000359,1.74e-24,3;CL:0002539,1.74e-24,3;CL:0000514,1.74e-24,3;CL:0000680,8.26e-13,6;CL:0000187,8.26e-13,6;CL:0000056,8.26e-13,6;CL:0000128,1.41e-12,6;CL:0000126,1.41e-12,6;CL:0000127,1.41e-12,6;CL:0000222,3.95e-11,7;CL:0002605,5.06e-10,2;CL:0002604,5.06e-10,2;CL:0002603,6.19e-10,2;CL:0002453,1.08e-09,8;CL:0000355,7.02e-09,9;CL:0000333,5.99e-08,10;CL:0000095,5.99e-08,10;CL:0000243,5.99e-08,10;CL:0000123,5.99e-08,10;CL:0000125,5.99e-08,10;CL:0000030,5.99e-08,10;CL:0000339,5.99e-08,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.74e-24,3;UBERON:0004237,1.74e-24,3;UBERON:0004695,1.74e-24,3;UBERON:0002111,1.74e-24,3;UBERON:0004178,1.74e-24,3;UBERON:0000947,1.16e-18,4;UBERON:0001637,1.16e-18,4;UBERON:0004573,1.16e-18,4;UBERON:0003509,1.16e-18,4;UBERON:0004571,1.16e-18,4;UBERON:0010191,1.16e-18,4;UBERON:0004572,1.16e-18,4;UBERON:0000055,3.73e-15,5;UBERON:0007500,3.73e-15,5;UBERON:0001981,3.73e-15,5;UBERON:0002049,3.73e-15,5;UBERON:0007798,3.73e-15,5;UBERON:0004537,3.73e-15,5;UBERON:0006965,3.73e-15,5;UBERON:0001134,7.02e-09,9;UBERON:0002036,7.02e-09,9;UBERON:0002385,7.02e-09,9;UBERON:0000486,7.02e-09,9;UBERON:0007503,7.02e-09,9;UBERON:0001015,7.02e-09,9;UBERON:0002329,7.02e-09,9;UBERON:0003082,7.02e-09,9;UBERON:0003059,7.02e-09,9;UBERON:0007282,7.02e-09,9;UBERON:0004290,7.02e-09,9;UBERON:0009618,7.02e-09,9;UBERON:0000383,4.34e-08,10;UBERON:0007524,1.94e-07,11;UBERON:0003077,1.94e-07,11;UBERON:0007285,1.94e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,5.37297735463427,0.550640256485045,1.56478268869608,0.436050312760893,1.97717564461025,0.777719596297134,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.37863096666592,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0.148442139064825,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0.834141747676794,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0.590440591918409,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.476087281772027,1.17080188714679,0.157635144106191,0.221464689648775,0,0.655453258862952,0,0.433947175744535,0,0,0,0.275936746304732,0,0,0.327869890753351,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,5.37297735463427,0.550640256485045,1.56478268869608,0.436050312760893,1.97717564461025,0.777719596297134,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.37863096666592,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0.148442139064825,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0.834141747676794,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0.590440591918409,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.476087281772027,1.17080188714679,0.157635144106191,0.221464689648775,0,0.655453258862952,0,0.433947175744535,0,0,0,0.275936746304732,0,0,0.327869890753351,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr10:85808761..85808769,+ | |short_description=p@chr10:85808761..85808769,+ | ||
}} | }} |
Latest revision as of 23:06, 4 August 2015
Short description: | p@chr10:85808761..85808769, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85808761..85808769, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.74e-24 | 3 |
vascular associated smooth muscle cell | 1.74e-24 | 3 |
aortic smooth muscle cell | 1.74e-24 | 3 |
smooth muscle myoblast | 1.74e-24 | 3 |
muscle precursor cell | 8.26e-13 | 6 |
muscle cell | 8.26e-13 | 6 |
myoblast | 8.26e-13 | 6 |
oligodendrocyte | 1.41e-12 | 6 |
macroglial cell | 1.41e-12 | 6 |
astrocyte | 1.41e-12 | 6 |
mesodermal cell | 3.95e-11 | 7 |
astrocyte of the cerebral cortex | 5.06e-10 | 2 |
astrocyte of the hippocampus | 5.06e-10 | 2 |
astrocyte of the cerebellum | 6.19e-10 | 2 |
oligodendrocyte precursor cell | 1.08e-09 | 8 |
multi-potent skeletal muscle stem cell | 7.02e-09 | 9 |
migratory neural crest cell | 5.99e-08 | 10 |
neuron associated cell | 5.99e-08 | 10 |
glial cell (sensu Vertebrata) | 5.99e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 5.99e-08 | 10 |
glial cell | 5.99e-08 | 10 |
glioblast | 5.99e-08 | 10 |
glioblast (sensu Vertebrata) | 5.99e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.74e-24 | 3 |
blood vessel smooth muscle | 1.74e-24 | 3 |
arterial system smooth muscle | 1.74e-24 | 3 |
artery smooth muscle tissue | 1.74e-24 | 3 |
aorta smooth muscle tissue | 1.74e-24 | 3 |
aorta | 1.16e-18 | 4 |
artery | 1.16e-18 | 4 |
systemic artery | 1.16e-18 | 4 |
arterial blood vessel | 1.16e-18 | 4 |
systemic arterial system | 1.16e-18 | 4 |
aortic system | 1.16e-18 | 4 |
arterial system | 1.16e-18 | 4 |
vessel | 3.73e-15 | 5 |
epithelial tube open at both ends | 3.73e-15 | 5 |
blood vessel | 3.73e-15 | 5 |
vasculature | 3.73e-15 | 5 |
vascular system | 3.73e-15 | 5 |
blood vasculature | 3.73e-15 | 5 |
vascular cord | 3.73e-15 | 5 |
skeletal muscle tissue | 7.02e-09 | 9 |
striated muscle tissue | 7.02e-09 | 9 |
muscle tissue | 7.02e-09 | 9 |
multilaminar epithelium | 7.02e-09 | 9 |
epithelial vesicle | 7.02e-09 | 9 |
musculature | 7.02e-09 | 9 |
somite | 7.02e-09 | 9 |
myotome | 7.02e-09 | 9 |
presomitic mesoderm | 7.02e-09 | 9 |
presumptive segmental plate | 7.02e-09 | 9 |
dermomyotome | 7.02e-09 | 9 |
trunk paraxial mesoderm | 7.02e-09 | 9 |
musculature of body | 4.34e-08 | 10 |
dense mesenchyme tissue | 1.94e-07 | 11 |
paraxial mesoderm | 1.94e-07 | 11 |
presumptive paraxial mesoderm | 1.94e-07 | 11 |