FFCP PHASE1:Mm9::chr1:142142626..142142638,+: Difference between revisions
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{{FFCP|EntrezGene=240776|HGNC=|MCL_coexpression_id=2|UniProt=D3Z592|association_with_transcript=-154bp_to_ENSMUST00000119786_5end|description=CAGE_peak_7_at_Kcnt2_5end|id=chr1:142142626..142142638,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!2.24e-10!10;UBERON:0000411!2.24e-10!10;UBERON:0001950!2.24e-10!10;UBERON:0000956!3.11e-08!21;UBERON:0001869!3.11e-08!21;UBERON:0000203!3.11e-08!21;UBERON:0002619!8.50e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.48e-35,10;UBERON:0000411,7.48e-35,10;UBERON:0001950,7.48e-35,10;UBERON:0002619,1.40e-24,17;UBERON:0000956,6.25e-24,21;UBERON:0001869,6.25e-24,21;UBERON:0000203,6.25e-24,21;UBERON:0003528,7.77e-17,29;UBERON:0002791,7.77e-17,29;UBERON:0001893,7.77e-17,29;UBERON:0002780,2.55e-14,39;UBERON:0001890,2.55e-14,39;UBERON:0006240,2.55e-14,39;UBERON:0002020,4.30e-14,34;UBERON:0003080,6.53e-14,40;UBERON:0002616,7.85e-12,46;UBERON:0000955,1.55e-11,47;UBERON:0006238,1.55e-11,47;UBERON:0000073,1.67e-11,54;UBERON:0003056,5.55e-11,49;UBERON:0001049,3.14e-10,52;UBERON:0005068,3.14e-10,52;UBERON:0006241,3.14e-10,52;UBERON:0007135,3.14e-10,52;UBERON:0010314,2.48e-09,92;UBERON:0002346,6.31e-08,64;UBERON:0003075,6.31e-08,64;UBERON:0007284,6.31e-08,64;UBERON:0001017,6.35e-08,73;UBERON:0001016,1.19e-07,75;UBERON:0004111,2.21e-07,122;UBERON:0000025,5.01e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0,0,0,1.28629718017973,1.14613375975503,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.255374676170375,0.614426133024974,0,0,0,0,0,0.61119299110724,0.294628585473668,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,0,0,0.150722640552623,0.23517741427141,0,0,0.578397427679647,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.748953197024114,0.915001205637253,0,5.9100268865374,3.83573185995496,0.20778804455956,1.1356888414743,0.611036183101898,0.248813941220186,0,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.56748166682099,1.16959989940266,0.439100230582101,0.671032093801859,2.10289948564127,0.514523061896422,0,0,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.584511715822624,0.790575555893047,0.321321316421807,2.6968616189571,0,0.325773918707152,0.659880491890142,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0.627264888043406,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0.5208175393758,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0.750729901804728,0,0.214368379079066,0,5.64751842617067,4.60325236507177,3.43737308063638,5.499301834998,2.05524755931193,6.7985450765073,0.675022500231806,3.15224842256954,5.89085131679466,3.62432218226274,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.37456602987953,0.320125762024346,0.516919220600519,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.309873682371932,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p7@Kcnt2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:240776 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z592 | |||
|association_with_transcript=-154bp_to_ENSMUST00000119786_5end | |||
|cluster_id=chr1:142142626..142142638,+ | |||
|description=CAGE_peak_7_at_Kcnt2_5end | |||
|id=chr1:142142626..142142638,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.24e-10!10;UBERON:0000411!2.24e-10!10;UBERON:0001950!2.24e-10!10;UBERON:0000956!3.11e-08!21;UBERON:0001869!3.11e-08!21;UBERON:0000203!3.11e-08!21;UBERON:0002619!8.50e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.48e-35,10;UBERON:0000411,7.48e-35,10;UBERON:0001950,7.48e-35,10;UBERON:0002619,1.40e-24,17;UBERON:0000956,6.25e-24,21;UBERON:0001869,6.25e-24,21;UBERON:0000203,6.25e-24,21;UBERON:0003528,7.77e-17,29;UBERON:0002791,7.77e-17,29;UBERON:0001893,7.77e-17,29;UBERON:0002780,2.55e-14,39;UBERON:0001890,2.55e-14,39;UBERON:0006240,2.55e-14,39;UBERON:0002020,4.30e-14,34;UBERON:0003080,6.53e-14,40;UBERON:0002616,7.85e-12,46;UBERON:0000955,1.55e-11,47;UBERON:0006238,1.55e-11,47;UBERON:0000073,1.67e-11,54;UBERON:0003056,5.55e-11,49;UBERON:0001049,3.14e-10,52;UBERON:0005068,3.14e-10,52;UBERON:0006241,3.14e-10,52;UBERON:0007135,3.14e-10,52;UBERON:0010314,2.48e-09,92;UBERON:0002346,6.31e-08,64;UBERON:0003075,6.31e-08,64;UBERON:0007284,6.31e-08,64;UBERON:0001017,6.35e-08,73;UBERON:0001016,1.19e-07,75;UBERON:0004111,2.21e-07,122;UBERON:0000025,5.01e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0,0,0,1.28629718017973,1.14613375975503,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.255374676170375,0.614426133024974,0,0,0,0,0,0.61119299110724,0.294628585473668,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,0,0,0.150722640552623,0.23517741427141,0,0,0.578397427679647,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.748953197024114,0.915001205637253,0,5.9100268865374,3.83573185995496,0.20778804455956,1.1356888414743,0.611036183101898,0.248813941220186,0,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.56748166682099,1.16959989940266,0.439100230582101,0.671032093801859,2.10289948564127,0.514523061896422,0,0,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.584511715822624,0.790575555893047,0.321321316421807,2.6968616189571,0,0.325773918707152,0.659880491890142,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0.627264888043406,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0.5208175393758,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0.750729901804728,0,0.214368379079066,0,5.64751842617067,4.60325236507177,3.43737308063638,5.499301834998,2.05524755931193,6.7985450765073,0.675022500231806,3.15224842256954,5.89085131679466,3.62432218226274,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.37456602987953,0.320125762024346,0.516919220600519,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.309873682371932,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Kcnt2 | |||
}} |
Revision as of 22:49, 4 August 2015
Short description: | p7@Kcnt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Kcnt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -154bp_to_ENSMUST00000119786_5end |
EntrezGene: | 240776 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 7.48e-35 | 10 |
visual cortex | 7.48e-35 | 10 |
neocortex | 7.48e-35 | 10 |
regional part of cerebral cortex | 1.40e-24 | 17 |
cerebral cortex | 6.25e-24 | 21 |
cerebral hemisphere | 6.25e-24 | 21 |
pallium | 6.25e-24 | 21 |
brain grey matter | 7.77e-17 | 29 |
regional part of telencephalon | 7.77e-17 | 29 |
telencephalon | 7.77e-17 | 29 |
regional part of forebrain | 2.55e-14 | 39 |
forebrain | 2.55e-14 | 39 |
future forebrain | 2.55e-14 | 39 |
gray matter | 4.30e-14 | 34 |
anterior neural tube | 6.53e-14 | 40 |
regional part of brain | 7.85e-12 | 46 |
brain | 1.55e-11 | 47 |
future brain | 1.55e-11 | 47 |
regional part of nervous system | 1.67e-11 | 54 |
pre-chordal neural plate | 5.55e-11 | 49 |
neural tube | 3.14e-10 | 52 |
neural rod | 3.14e-10 | 52 |
future spinal cord | 3.14e-10 | 52 |
neural keel | 3.14e-10 | 52 |
structure with developmental contribution from neural crest | 2.48e-09 | 92 |
neurectoderm | 6.31e-08 | 64 |
neural plate | 6.31e-08 | 64 |
presumptive neural plate | 6.31e-08 | 64 |
central nervous system | 6.35e-08 | 73 |
nervous system | 1.19e-07 | 75 |
anatomical conduit | 2.21e-07 | 122 |
tube | 5.01e-07 | 114 |