FFCP PHASE1:Mm9::chr2:28379505..28379515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=167 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:28379505..28379515,+ | |||
|description=CAGE_peak_at_chr2:28379505..28379515,+ | |||
|id=chr2:28379505..28379515,+ | |||
|ontology_enrichment_celltype=CL:0000144!3.39e-11!121;CL:0000012!3.39e-11!121;CL:0000063!2.09e-09!66;CL:0000548!2.16e-09!115;CL:0000004!2.16e-09!115;CL:0000255!2.16e-09!115;CL:0002371!6.43e-09!118;CL:0002563!4.96e-08!9;CL:0002251!4.96e-08!9;CL:0000034!3.28e-07!97;CL:0000066!9.47e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.26e-17,19;CL:0000988,5.01e-10,32;CL:0002032,5.01e-10,32;CL:0000037,5.01e-10,32;CL:0000837,5.01e-10,32;CL:0000557,2.89e-09,7;CL:0002320,7.27e-09,46;CL:0000134,7.27e-09,46;CL:0000213,3.50e-08,1;CL:0002078,3.50e-08,1;CL:0000115,3.50e-08,1;CL:0002262,3.50e-08,1;CL:1000398,3.50e-08,1;CL:0000034,1.89e-07,97;CL:0000219,1.94e-07,54;CL:0000763,4.19e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!4.05e-08!11;UBERON:0003350!4.96e-08!9;UBERON:0004808!4.96e-08!9;UBERON:0001277!4.96e-08!9;UBERON:0000485!5.40e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.27e-09,46;UBERON:0002394,3.50e-08,1;UBERON:0001281,3.50e-08,1;UBERON:0000353,3.50e-08,1;UBERON:0003497,3.50e-08,1;UBERON:0003909,3.50e-08,1;UBERON:0003928,3.50e-08,1;UBERON:0003835,3.50e-08,1;UBERON:0003513,3.50e-08,1;UBERON:0001280,3.50e-08,1;UBERON:0004647,3.50e-08,1;UBERON:0002294,3.50e-08,1;UBERON:0001173,3.50e-08,1;UBERON:0004912,3.50e-08,1;UBERON:0005171,3.50e-08,1 | |||
|phase1_expression=0.160148847104794,1.39590163055744,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,1.14846392823004,0,0.215471232685889,0,0,0,2.54012269383853,0.61506478758457,0,0.288851619751275,0,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0,0,0,0,0.227178579999552,0.226714680320357,1.73918693221007,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39630249011841,5.39912457894067,1.14363204365758,0.299581278809645,0.457500602818626,0,0,0,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0.491764273019036,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0.238968797952552,0.668396022247182,0,0.809621403349789,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,2.23922323717853,1.65839968565309,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,1.39590163055744,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,1.14846392823004,0,0.215471232685889,0,0,0,2.54012269383853,0.61506478758457,0,0.288851619751275,0,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0,0,0,0,0.227178579999552,0.226714680320357,1.73918693221007,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39630249011841,5.39912457894067,1.14363204365758,0.299581278809645,0.457500602818626,0,0,0,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0.491764273019036,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0.238968797952552,0.668396022247182,0,0.809621403349789,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,2.23922323717853,1.65839968565309,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:28379505..28379515,+ | |||
}} | }} |
Latest revision as of 22:48, 4 August 2015
Short description: | p@chr2:28379505..28379515, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:28379505..28379515, + |
Coexpression cluster: | MCL_coexpression_mm9:167 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.26e-17 | 19 |
hematopoietic cell | 5.01e-10 | 32 |
hematopoietic oligopotent progenitor cell | 5.01e-10 | 32 |
hematopoietic stem cell | 5.01e-10 | 32 |
hematopoietic multipotent progenitor cell | 5.01e-10 | 32 |
granulocyte monocyte progenitor cell | 2.89e-09 | 7 |
connective tissue cell | 7.27e-09 | 46 |
mesenchymal cell | 7.27e-09 | 46 |
lining cell | 3.50e-08 | 1 |
meso-epithelial cell | 3.50e-08 | 1 |
endothelial cell | 3.50e-08 | 1 |
endothelial cell of sinusoid | 3.50e-08 | 1 |
endothelial cell of hepatic sinusoid | 3.50e-08 | 1 |
stem cell | 1.89e-07 | 97 |
motile cell | 1.94e-07 | 54 |
myeloid cell | 4.19e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.27e-09 | 46 |
bile duct | 3.50e-08 | 1 |
hepatic sinusoid | 3.50e-08 | 1 |
parenchyma | 3.50e-08 | 1 |
abdomen blood vessel | 3.50e-08 | 1 |
sinusoid | 3.50e-08 | 1 |
digestive system duct | 3.50e-08 | 1 |
abdominal segment blood vessel | 3.50e-08 | 1 |
trunk blood vessel | 3.50e-08 | 1 |
liver parenchyma | 3.50e-08 | 1 |
liver lobule | 3.50e-08 | 1 |
biliary system | 3.50e-08 | 1 |
biliary tree | 3.50e-08 | 1 |
biliary bud | 3.50e-08 | 1 |
hepatic duct | 3.50e-08 | 1 |