FFCP PHASE1:Mm9::chr12:28020918..28020929,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:28020918..28020929,- | |||
|description=CAGE_peak_at_chr12:28020918..28020929,- | |description=CAGE_peak_at_chr12:28020918..28020929,- | ||
|id=chr12:28020918..28020929,- | |id=chr12:28020918..28020929,- | ||
|ontology_enrichment_celltype=CL:0000117!3.41e-12!23;CL:0000337!3.41e-12!23;CL:0002609!3.31e-11!6;CL:0000540!3.49e-11!33;CL:0000047!3.49e-11!33;CL:0000031!3.49e-11!33;CL:0000404!3.49e-11!33;CL:0000393!1.03e-08!39;CL:0000211!1.03e-08!39;CL:0002319!1.45e-08!43;CL:0000221!2.96e-08!44;CL:0000133!2.96e-08!44 | |ontology_enrichment_celltype=CL:0000117!3.41e-12!23;CL:0000337!3.41e-12!23;CL:0002609!3.31e-11!6;CL:0000540!3.49e-11!33;CL:0000047!3.49e-11!33;CL:0000031!3.49e-11!33;CL:0000404!3.49e-11!33;CL:0000393!1.03e-08!39;CL:0000211!1.03e-08!39;CL:0002319!1.45e-08!43;CL:0000221!2.96e-08!44;CL:0000133!2.96e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.34e-41,6;CL:0000117,6.12e-34,23;CL:0000337,6.12e-34,23;CL:0000120,3.42e-29,3;CL:0000540,1.23e-23,33;CL:0000047,1.23e-23,33;CL:0000031,1.23e-23,33;CL:0000404,1.23e-23,33;CL:0000393,5.55e-20,39;CL:0000211,5.55e-20,39;CL:0002319,4.15e-18,43;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0002608,4.93e-14,3;CL:0002321,4.95e-11,70;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!5.95e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.23e-12,29;UBERON:0002791,3.23e-12,29;UBERON:0001893,3.23e-12,29;UBERON:0000956,5.22e-12,21;UBERON:0001869,5.22e-12,21;UBERON:0000203,5.22e-12,21;UBERON:0001017,1.45e-10,73;UBERON:0002020,2.04e-10,34;UBERON:0001016,2.82e-10,75;UBERON:0002780,4.51e-09,39;UBERON:0001890,4.51e-09,39;UBERON:0006240,4.51e-09,39;UBERON:0003080,7.65e-09,40;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0002616,1.12e-07,46;UBERON:0000955,1.65e-07,47;UBERON:0006238,1.65e-07,47;UBERON:0003056,3.38e-07,49;UBERON:0001049,8.97e-07,52;UBERON:0005068,8.97e-07,52;UBERON:0006241,8.97e-07,52;UBERON:0007135,8.97e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,1.97010263386108,3.51015439662396,2.10324961351382,0,0,1.83736198822431,1.72521847832825,0.919218786610021,0,0,0,0.395658863190582,1.00636407962651,0.52091337055676,0,0,0,0.294628585473668,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0.520481771850815,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.527853372491847,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0,0.512200817262403,0.486213434136588,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,1.97010263386108,3.51015439662396,2.10324961351382,0,0,1.83736198822431,1.72521847832825,0.919218786610021,0,0,0,0.395658863190582,1.00636407962651,0.52091337055676,0,0,0,0.294628585473668,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0.520481771850815,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.527853372491847,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0,0.512200817262403,0.486213434136588,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr12:28020918..28020929,- | |short_description=p@chr12:28020918..28020929,- | ||
}} | }} |
Latest revision as of 22:44, 4 August 2015
Short description: | p@chr12:28020918..28020929, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28020918..28020929, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.34e-41 | 6 |
CNS neuron (sensu Vertebrata) | 6.12e-34 | 23 |
neuroblast (sensu Vertebrata) | 6.12e-34 | 23 |
granule cell | 3.42e-29 | 3 |
neuron | 1.23e-23 | 33 |
neuronal stem cell | 1.23e-23 | 33 |
neuroblast | 1.23e-23 | 33 |
electrically signaling cell | 1.23e-23 | 33 |
electrically responsive cell | 5.55e-20 | 39 |
electrically active cell | 5.55e-20 | 39 |
neural cell | 4.15e-18 | 43 |
ectodermal cell | 1.08e-17 | 44 |
neurectodermal cell | 1.08e-17 | 44 |
hippocampal neuron | 4.93e-14 | 3 |
embryonic cell | 4.95e-11 | 70 |
somatic stem cell | 2.09e-08 | 91 |
multi fate stem cell | 2.09e-08 | 91 |
stem cell | 7.32e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 3.23e-12 | 29 |
regional part of telencephalon | 3.23e-12 | 29 |
telencephalon | 3.23e-12 | 29 |
cerebral cortex | 5.22e-12 | 21 |
cerebral hemisphere | 5.22e-12 | 21 |
pallium | 5.22e-12 | 21 |
central nervous system | 1.45e-10 | 73 |
gray matter | 2.04e-10 | 34 |
nervous system | 2.82e-10 | 75 |
regional part of forebrain | 4.51e-09 | 39 |
forebrain | 4.51e-09 | 39 |
future forebrain | 4.51e-09 | 39 |
anterior neural tube | 7.65e-09 | 40 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
regional part of brain | 1.12e-07 | 46 |
brain | 1.65e-07 | 47 |
future brain | 1.65e-07 | 47 |
pre-chordal neural plate | 3.38e-07 | 49 |
neural tube | 8.97e-07 | 52 |
neural rod | 8.97e-07 | 52 |
future spinal cord | 8.97e-07 | 52 |
neural keel | 8.97e-07 | 52 |