FFCP PHASE1:Mm9::chr4:134062586..134062591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:134062586..134062591,+ | |||
|description=CAGE_peak_at_chr4:134062586..134062591,+ | |description=CAGE_peak_at_chr4:134062586..134062591,+ | ||
|id=chr4:134062586..134062591,+ | |id=chr4:134062586..134062591,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.73e-20,7;CL:0000682,8.61e-13,3;CL:0000239,8.97e-11,6;CL:0000677,8.97e-11,6;CL:0000584,8.97e-11,6;CL:0002194,2.30e-09,4;CL:0000766,2.30e-09,4;CL:0000234,2.30e-09,4;CL:0000576,2.30e-09,4;CL:0000235,2.30e-09,4;CL:0000864,2.30e-09,4;CL:0002009,2.30e-09,4;CL:0000040,2.30e-09,4;CL:0000559,2.30e-09,4;CL:0000075,2.99e-09,7;CL:0002476,9.43e-09,2;CL:0002563,3.26e-07,9;CL:0002251,3.26e-07,9;CL:0000066,4.88e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,2.90e-09,2;UBERON:0001961,2.90e-09,2;UBERON:0001744,2.90e-09,2;UBERON:0000344,3.59e-09,15;UBERON:0003350,3.26e-07,9;UBERON:0004808,3.26e-07,9;UBERON:0001277,3.26e-07,9 | |||
|phase1_expression=0.480446541314382,2.79180326111489,7.73498706962211,0.30246421130683,1.00179145989269,0.503637815735669,3.03696432774183,0.258246646883153,0.140788722151667,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.262261207256992,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,3.03985603307473,4.35877634027623,6.31655160526522,3.01533397311352,2.15471232685889,0.190023419456374,0,0.221730510655305,1.90509202037889,0,0,0,0,0,0.418531630736908,1.5626706890476,0,0.588231488031014,0,0.485510353031154,0,0,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0.299600110518405,2.68952813725088,0,0.135005938331691,0,0.856952953211411,0,0,0.0958454710182364,0,1.10115880999389,0.510749352340751,0.153606533256243,0,0,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.559198337475902,0,0.151143120213571,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0.70667914902068,0,0,0,0,0,0,0,1.48439043634778,0,0.29688427812965,0,0,0.461230994512117,0.60289056221049,0.470354828542819,0.376999773989026,0.494389935468748,0.144599356919912,0,0,0.220841518460394,0,0,0,0.83778682725382,0,0.479260498023681,0,0.381210681219194,0.449371918214468,0,0.376963056338593,0.347648640384553,0,0.62336413367868,0.811206315338788,0.203678727700633,0,0,21.6755111563068,0,0,0,0,0.0680364991513279,0,0.187403449119458,3.88055056108524,0,0,0,0,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0.162137619091711,0,0.219550115291051,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0,0,0,0.22237804384487,0.570676878337677,0,1.31759163779209,1.75934646160189,0.994782360205754,0.779856348476481,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0,0.493588655687202,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,2.87536413054709,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0,0.491589944147214,0.863424909329478,0.433947175744535,4.52373851817817,1.08781136763742,0,0,0.321101179975584,0.703270119553219,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0.494910368917606,0,0,0,0.188605079755898,0,0,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.645857706783622,0.0603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,0,0,0,0,0.188368457004691,0,0,0.509935289981566,0,0.276399947608848,0,0,0,0,0.209088296014469,0.436725127492355,0.674321731924103,0.991841468704031,0.523511883968059,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0,0,0.469428954583016,0.13020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0,0.405450430580328,0,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0.282328141245992,0,0,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |phase1_expression=0.480446541314382,2.79180326111489,7.73498706962211,0.30246421130683,1.00179145989269,0.503637815735669,3.03696432774183,0.258246646883153,0.140788722151667,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.262261207256992,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,3.03985603307473,4.35877634027623,6.31655160526522,3.01533397311352,2.15471232685889,0.190023419456374,0,0.221730510655305,1.90509202037889,0,0,0,0,0,0.418531630736908,1.5626706890476,0,0.588231488031014,0,0.485510353031154,0,0,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0.299600110518405,2.68952813725088,0,0.135005938331691,0,0.856952953211411,0,0,0.0958454710182364,0,1.10115880999389,0.510749352340751,0.153606533256243,0,0,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.559198337475902,0,0.151143120213571,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0.70667914902068,0,0,0,0,0,0,0,1.48439043634778,0,0.29688427812965,0,0,0.461230994512117,0.60289056221049,0.470354828542819,0.376999773989026,0.494389935468748,0.144599356919912,0,0,0.220841518460394,0,0,0,0.83778682725382,0,0.479260498023681,0,0.381210681219194,0.449371918214468,0,0.376963056338593,0.347648640384553,0,0.62336413367868,0.811206315338788,0.203678727700633,0,0,21.6755111563068,0,0,0,0,0.0680364991513279,0,0.187403449119458,3.88055056108524,0,0,0,0,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0.162137619091711,0,0.219550115291051,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0,0,0,0.22237804384487,0.570676878337677,0,1.31759163779209,1.75934646160189,0.994782360205754,0.779856348476481,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0,0.493588655687202,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,2.87536413054709,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0,0.491589944147214,0.863424909329478,0.433947175744535,4.52373851817817,1.08781136763742,0,0,0.321101179975584,0.703270119553219,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0.494910368917606,0,0,0,0.188605079755898,0,0,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.645857706783622,0.0603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,0,0,0,0,0.188368457004691,0,0,0.509935289981566,0,0.276399947608848,0,0,0,0,0.209088296014469,0.436725127492355,0.674321731924103,0.991841468704031,0.523511883968059,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0,0,0.469428954583016,0.13020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0,0.405450430580328,0,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0.282328141245992,0,0,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr4:134062586..134062591,+ | |short_description=p@chr4:134062586..134062591,+ | ||
}} | }} |
Latest revision as of 22:40, 4 August 2015
Short description: | p@chr4:134062586..134062591, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:134062586..134062591, + |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.73e-20 | 7 |
M cell of gut | 8.61e-13 | 3 |
brush border epithelial cell | 8.97e-11 | 6 |
gut absorptive cell | 8.97e-11 | 6 |
enterocyte | 8.97e-11 | 6 |
monopoietic cell | 2.30e-09 | 4 |
myeloid leukocyte | 2.30e-09 | 4 |
phagocyte | 2.30e-09 | 4 |
monocyte | 2.30e-09 | 4 |
macrophage | 2.30e-09 | 4 |
tissue-resident macrophage | 2.30e-09 | 4 |
macrophage dendritic cell progenitor | 2.30e-09 | 4 |
monoblast | 2.30e-09 | 4 |
promonocyte | 2.30e-09 | 4 |
columnar/cuboidal epithelial cell | 2.99e-09 | 7 |
bone marrow macrophage | 9.43e-09 | 2 |
intestinal epithelial cell | 3.26e-07 | 9 |
epithelial cell of alimentary canal | 3.26e-07 | 9 |
epithelial cell | 4.88e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 2.90e-09 | 2 |
mucosa-associated lymphoid tissue | 2.90e-09 | 2 |
lymphoid tissue | 2.90e-09 | 2 |
mucosa | 3.59e-09 | 15 |
epithelium of mucosa | 3.26e-07 | 9 |
gastrointestinal system epithelium | 3.26e-07 | 9 |
intestinal epithelium | 3.26e-07 | 9 |