FFCP PHASE1:Mm9::chr7:28874831..28874846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=273 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:28874831..28874846,+ | |||
|description=CAGE_peak_at_chr7:28874831..28874846,+ | |description=CAGE_peak_at_chr7:28874831..28874846,+ | ||
|id=chr7:28874831..28874846,+ | |id=chr7:28874831..28874846,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.11e-09!9;CL:0002251!1.11e-09!9;CL:0000239!2.81e-07!6;CL:0000677!2.81e-07!6;CL:0000212!2.81e-07!6;CL:0000584!2.81e-07!6 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.58e-23!15;UBERON:0000160!1.61e-22!43;UBERON:0005409!1.68e-18!59;UBERON:0001242!1.79e-18!13;UBERON:0000060!1.79e-18!13;UBERON:0001262!1.79e-18!13;UBERON:0004786!1.79e-18!13;UBERON:0004923!7.11e-16!24;UBERON:0003350!1.11e-09!9;UBERON:0004808!1.11e-09!9;UBERON:0001277!1.11e-09!9;UBERON:0001007!4.75e-09!128;UBERON:0001555!4.75e-09!128;UBERON:0007026!4.75e-09!128;UBERON:0000331!6.14e-09!3;UBERON:0002116!6.14e-09!3;UBERON:0001204!6.14e-09!3;UBERON:0001168!6.14e-09!3;UBERON:0004119!8.09e-09!130;UBERON:0000925!8.09e-09!130;UBERON:0006595!8.09e-09!130;UBERON:0000485!8.48e-08!11;UBERON:0004921!2.37e-07!126;UBERON:0004185!2.37e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.29e-27,31;UBERON:0000344,7.08e-22,15;UBERON:0005409,7.12e-20,47;UBERON:0000331,3.13e-16,3;UBERON:0002116,3.13e-16,3;UBERON:0001204,3.13e-16,3;UBERON:0001168,3.13e-16,3;UBERON:0001242,2.41e-14,13;UBERON:0001262,2.41e-14,13;UBERON:0004786,2.41e-14,13;UBERON:0004923,2.41e-13,24;UBERON:0002108,2.55e-12,4;UBERON:0001962,8.05e-12,2;UBERON:0001961,8.05e-12,2;UBERON:0001744,8.05e-12,2;UBERON:0001155,1.03e-11,2;UBERON:0000059,1.03e-11,2;UBERON:0001007,1.63e-09,116;UBERON:0001555,1.63e-09,116;UBERON:0007026,1.63e-09,116;UBERON:0004119,2.58e-09,118;UBERON:0000925,2.58e-09,118;UBERON:0006595,2.58e-09,118;UBERON:0002465,3.63e-08,3;UBERON:0004921,5.10e-07,114;UBERON:0001153,9.48e-07,1;UBERON:0001045,9.48e-07,1 | |||
|phase1_expression=0,0.697950815278722,0,0.30246421130683,0,5.03637815735669,8.87728034262997,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.7997726838022,3.44113921600755,0,0.86152399231815,2.15471232685889,10.4512880701006,1.51218077855958,1.77384408524244,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0,0,0,0,0,0,0.380451252225118,2.37264530772256,1.64698954724011,1.50801125280162,0.994782360205754,0.779856348476481,3.59527763461689,0.648414149624083,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0.697950815278722,0,0.30246421130683,0,5.03637815735669,8.87728034262997,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.7997726838022,3.44113921600755,0,0.86152399231815,2.15471232685889,10.4512880701006,1.51218077855958,1.77384408524244,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0,0,0,0,0,0,0.380451252225118,2.37264530772256,1.64698954724011,1.50801125280162,0.994782360205754,0.779856348476481,3.59527763461689,0.648414149624083,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:28874831..28874846,+ | |short_description=p@chr7:28874831..28874846,+ | ||
}} | }} |
Latest revision as of 22:09, 4 August 2015
Short description: | p@chr7:28874831..28874846, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:28874831..28874846, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 8.29e-27 | 31 |
mucosa | 7.08e-22 | 15 |
gastrointestinal system | 7.12e-20 | 47 |
ileal mucosa | 3.13e-16 | 3 |
ileum | 3.13e-16 | 3 |
mucosa of small intestine | 3.13e-16 | 3 |
wall of small intestine | 3.13e-16 | 3 |
intestinal mucosa | 2.41e-14 | 13 |
wall of intestine | 2.41e-14 | 13 |
gastrointestinal system mucosa | 2.41e-14 | 13 |
organ component layer | 2.41e-13 | 24 |
small intestine | 2.55e-12 | 4 |
gut-associated lymphoid tissue | 8.05e-12 | 2 |
mucosa-associated lymphoid tissue | 8.05e-12 | 2 |
lymphoid tissue | 8.05e-12 | 2 |
colon | 1.03e-11 | 2 |
large intestine | 1.03e-11 | 2 |
digestive system | 1.63e-09 | 116 |
digestive tract | 1.63e-09 | 116 |
primitive gut | 1.63e-09 | 116 |
endoderm-derived structure | 2.58e-09 | 118 |
endoderm | 2.58e-09 | 118 |
presumptive endoderm | 2.58e-09 | 118 |
lymphoid system | 3.63e-08 | 3 |
subdivision of digestive tract | 5.10e-07 | 114 |
caecum | 9.48e-07 | 1 |
midgut | 9.48e-07 | 1 |