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FFCP PHASE1:Mm9::chr6:110595566..110595582,+: Difference between revisions

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{{FFCP|EntrezGene=108073|HGNC=|MCL_coexpression_id=2|UniProt=G5E8D5,Q68ED2,G3UZU3|association_with_transcript=0bp_to_ENSMUST00000071076,ENSMUST00000172951,ENSMUST00000174018_5end|description=CAGE_peak_1_at_Grm7_5end|id=chr6:110595566..110595582,+|ontology_enrichment_celltype=CL:0000117!1.16e-08!23;CL:0000337!1.16e-08!23;CL:0000540!3.61e-08!33;CL:0000047!3.61e-08!33;CL:0000031!3.61e-08!33;CL:0000404!3.61e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.56e-08,23;CL:0000337,1.56e-08,23;CL:0000540,3.86e-08,33;CL:0000047,3.86e-08,33;CL:0000031,3.86e-08,33;CL:0000404,3.86e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!8.21e-22!71;UBERON:0003075!8.21e-22!71;UBERON:0007284!8.21e-22!71;UBERON:0000033!1.29e-20!63;UBERON:0001017!2.32e-20!73;UBERON:0005743!2.32e-20!73;UBERON:0000073!3.85e-20!75;UBERON:0001016!3.85e-20!75;UBERON:0004121!1.13e-19!102;UBERON:0000924!1.13e-19!102;UBERON:0006601!1.13e-19!102;UBERON:0003056!3.12e-19!49;UBERON:0001049!1.79e-18!52;UBERON:0005068!1.79e-18!52;UBERON:0006241!1.79e-18!52;UBERON:0007135!1.79e-18!52;UBERON:0000955!3.83e-17!50;UBERON:0006238!3.83e-17!50;UBERON:0002616!1.61e-16!49;UBERON:0003080!9.87e-15!40;UBERON:0002780!4.22e-14!39;UBERON:0001890!4.22e-14!39;UBERON:0006240!4.22e-14!39;UBERON:0002020!5.20e-14!34;UBERON:0002791!4.26e-11!29;UBERON:0003528!4.26e-11!29;UBERON:0001893!4.26e-11!29;UBERON:0000153!1.92e-09!94;UBERON:0007811!8.91e-09!86;UBERON:0002021!1.97e-08!10;UBERON:0000411!1.97e-08!10;UBERON:0001950!1.97e-08!10;UBERON:0000468!4.51e-08!333;UBERON:0002619!1.25e-07!17;UBERON:0000956!3.26e-07!21;UBERON:0001869!3.26e-07!21;UBERON:0000203!3.26e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.54e-23,64;UBERON:0003075,1.54e-23,64;UBERON:0007284,1.54e-23,64;UBERON:0001017,1.97e-21,73;UBERON:0001016,3.33e-21,75;UBERON:0004121,3.52e-20,95;UBERON:0000924,3.52e-20,95;UBERON:0006601,3.52e-20,95;UBERON:0000073,3.87e-20,54;UBERON:0003056,2.44e-19,49;UBERON:0001049,6.19e-19,52;UBERON:0005068,6.19e-19,52;UBERON:0006241,6.19e-19,52;UBERON:0007135,6.19e-19,52;UBERON:0010371,1.16e-18,73;UBERON:0000955,1.03e-15,47;UBERON:0006238,1.03e-15,47;UBERON:0002616,4.63e-15,46;UBERON:0003080,1.71e-14,40;UBERON:0010314,5.21e-14,92;UBERON:0002780,8.01e-14,39;UBERON:0001890,8.01e-14,39;UBERON:0006240,8.01e-14,39;UBERON:0002020,1.23e-13,34;UBERON:0003528,1.54e-10,29;UBERON:0002791,1.54e-10,29;UBERON:0001893,1.54e-10,29;UBERON:0002021,4.17e-09,10;UBERON:0000411,4.17e-09,10;UBERON:0001950,4.17e-09,10;UBERON:0002619,1.49e-07,17|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6304112688837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,1.10128051297009,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0.514518872071894,0,0,15.578367486189,20.6306481916093,20.9164363157039,2.03306719241479,0,0,0,0,2.09720077362883,2.30530983192933,0.622137673850866,0.675029691658453,1.26194976810829,27.7081454871689,37.3267834208227,3.55223317723367,1.72521847832825,2.75765635983006,28.6301290598411,32.8156458878932,25.9595041203051,17.672762555846,13.7231465403614,17.1901412283731,13.959149950069,34.3285192119325,29.1844653253707,58.6310885092599,45.2741944941147,33.5519002485541,1.74170244666323,1.36028808192214,0,0,0,0.539703191637817,0,0,1.96622188184453,0,0,0,3.94361575374705,0,0,0,0,0,0,0.79928715803342,0.258937883647172,2.3750742250372,2.60227990149204,0.608930956624282,1.84492397804847,1.05505848386836,2.23418543557839,0.879666139307728,0,0.289198713839823,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,3.72783522436244,12.5895742714965,9.84399522023239,0.255457055208591,0,0,0,50.1798642006156,83.26510971299,11.9371634507221,57.7096743038358,66.9974498205466,37.8174241098399,49.3213439725983,5.6011650117674,0.622034853050465,0.758168275301024,4.20883711772948,11.4505989807179,14.4838325793088,19.4467100189777,28.6339153887859,40.6177899933427,43.3024374562792,34.5759363625399,18.3679393224701,0.215567992932842,4.53854592402766,7.9178005873777,5.2606975782618,4.44875598760957,4.179025998266,2.88094990971121,4.97585667046233,0,0,0,1.03562886267751,1.40715635988658,1.80062061461015,1.42046841351126,0.590292695242212,0.771335564436891,0.930135779001631,0,0.583826711835847,0.493679549740441,0.492502392237286,0.324275238183423,0.584799949701329,1.3173006917463,1.20785776884335,44.7917590441591,15.8473103064098,0,0.528901133327089,2.13288250535234,3.71578674976702,4.12375876230699,3.22693639397348,3.55804870151792,2.09248188723815,0,0.658795818896044,1.50801125280162,0.994782360205754,1.55971269695296,1.79763881730844,0.864552199498777,0.796565093017469,2.27601481143698,8.91138398355885,14.6520056375005,7.73875045812194,5.43066964069352,4.55882829287071,8.60016904889899,1.77132177575523,4.70996183524124,2.46794327843601,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,2.4633883530163,0.977789858652155,0.169745085775188,0.2346902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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:108073
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=uniprot:G5E8D5,uniprot:Q68ED2,uniprot:G3UZU3
|association_with_transcript=0bp_to_ENSMUST00000071076,ENSMUST00000172951,ENSMUST00000174018_5end
|cluster_id=chr6:110595566..110595582,+
|description=CAGE_peak_1_at_Grm7_5end
|id=chr6:110595566..110595582,+
|ontology_enrichment_celltype=CL:0000117!1.16e-08!23;CL:0000337!1.16e-08!23;CL:0000540!3.61e-08!33;CL:0000047!3.61e-08!33;CL:0000031!3.61e-08!33;CL:0000404!3.61e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.56e-08,23;CL:0000337,1.56e-08,23;CL:0000540,3.86e-08,33;CL:0000047,3.86e-08,33;CL:0000031,3.86e-08,33;CL:0000404,3.86e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!8.21e-22!71;UBERON:0003075!8.21e-22!71;UBERON:0007284!8.21e-22!71;UBERON:0000033!1.29e-20!63;UBERON:0001017!2.32e-20!73;UBERON:0005743!2.32e-20!73;UBERON:0000073!3.85e-20!75;UBERON:0001016!3.85e-20!75;UBERON:0004121!1.13e-19!102;UBERON:0000924!1.13e-19!102;UBERON:0006601!1.13e-19!102;UBERON:0003056!3.12e-19!49;UBERON:0001049!1.79e-18!52;UBERON:0005068!1.79e-18!52;UBERON:0006241!1.79e-18!52;UBERON:0007135!1.79e-18!52;UBERON:0000955!3.83e-17!50;UBERON:0006238!3.83e-17!50;UBERON:0002616!1.61e-16!49;UBERON:0003080!9.87e-15!40;UBERON:0002780!4.22e-14!39;UBERON:0001890!4.22e-14!39;UBERON:0006240!4.22e-14!39;UBERON:0002020!5.20e-14!34;UBERON:0002791!4.26e-11!29;UBERON:0003528!4.26e-11!29;UBERON:0001893!4.26e-11!29;UBERON:0000153!1.92e-09!94;UBERON:0007811!8.91e-09!86;UBERON:0002021!1.97e-08!10;UBERON:0000411!1.97e-08!10;UBERON:0001950!1.97e-08!10;UBERON:0000468!4.51e-08!333;UBERON:0002619!1.25e-07!17;UBERON:0000956!3.26e-07!21;UBERON:0001869!3.26e-07!21;UBERON:0000203!3.26e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.54e-23,64;UBERON:0003075,1.54e-23,64;UBERON:0007284,1.54e-23,64;UBERON:0001017,1.97e-21,73;UBERON:0001016,3.33e-21,75;UBERON:0004121,3.52e-20,95;UBERON:0000924,3.52e-20,95;UBERON:0006601,3.52e-20,95;UBERON:0000073,3.87e-20,54;UBERON:0003056,2.44e-19,49;UBERON:0001049,6.19e-19,52;UBERON:0005068,6.19e-19,52;UBERON:0006241,6.19e-19,52;UBERON:0007135,6.19e-19,52;UBERON:0010371,1.16e-18,73;UBERON:0000955,1.03e-15,47;UBERON:0006238,1.03e-15,47;UBERON:0002616,4.63e-15,46;UBERON:0003080,1.71e-14,40;UBERON:0010314,5.21e-14,92;UBERON:0002780,8.01e-14,39;UBERON:0001890,8.01e-14,39;UBERON:0006240,8.01e-14,39;UBERON:0002020,1.23e-13,34;UBERON:0003528,1.54e-10,29;UBERON:0002791,1.54e-10,29;UBERON:0001893,1.54e-10,29;UBERON:0002021,4.17e-09,10;UBERON:0000411,4.17e-09,10;UBERON:0001950,4.17e-09,10;UBERON:0002619,1.49e-07,17
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6304112688837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,1.10128051297009,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0.514518872071894,0,0,15.578367486189,20.6306481916093,20.9164363157039,2.03306719241479,0,0,0,0,2.09720077362883,2.30530983192933,0.622137673850866,0.675029691658453,1.26194976810829,27.7081454871689,37.3267834208227,3.55223317723367,1.72521847832825,2.75765635983006,28.6301290598411,32.8156458878932,25.9595041203051,17.672762555846,13.7231465403614,17.1901412283731,13.959149950069,34.3285192119325,29.1844653253707,58.6310885092599,45.2741944941147,33.5519002485541,1.74170244666323,1.36028808192214,0,0,0,0.539703191637817,0,0,1.96622188184453,0,0,0,3.94361575374705,0,0,0,0,0,0,0.79928715803342,0.258937883647172,2.3750742250372,2.60227990149204,0.608930956624282,1.84492397804847,1.05505848386836,2.23418543557839,0.879666139307728,0,0.289198713839823,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,3.72783522436244,12.5895742714965,9.84399522023239,0.255457055208591,0,0,0,50.1798642006156,83.26510971299,11.9371634507221,57.7096743038358,66.9974498205466,37.8174241098399,49.3213439725983,5.6011650117674,0.622034853050465,0.758168275301024,4.20883711772948,11.4505989807179,14.4838325793088,19.4467100189777,28.6339153887859,40.6177899933427,43.3024374562792,34.5759363625399,18.3679393224701,0.215567992932842,4.53854592402766,7.9178005873777,5.2606975782618,4.44875598760957,4.179025998266,2.88094990971121,4.97585667046233,0,0,0,1.03562886267751,1.40715635988658,1.80062061461015,1.42046841351126,0.590292695242212,0.771335564436891,0.930135779001631,0,0.583826711835847,0.493679549740441,0.492502392237286,0.324275238183423,0.584799949701329,1.3173006917463,1.20785776884335,44.7917590441591,15.8473103064098,0,0.528901133327089,2.13288250535234,3.71578674976702,4.12375876230699,3.22693639397348,3.55804870151792,2.09248188723815,0,0.658795818896044,1.50801125280162,0.994782360205754,1.55971269695296,1.79763881730844,0.864552199498777,0.796565093017469,2.27601481143698,8.91138398355885,14.6520056375005,7.73875045812194,5.43066964069352,4.55882829287071,8.60016904889899,1.77132177575523,4.70996183524124,2.46794327843601,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,2.4633883530163,0.977789858652155,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,40.4587486769236,25.3177243039159,0,0,1.89304931649754,1.56175497718655,1.29254038639679,2.15071918157297,2.45078541490634,1.69845918473299,3.64329631507405,1.75353514746787,4.74345333535828,44.6636629826312,11.4971469018698,9.43747699436453,12.2165219515182,5.60898418106621,0,4.37005145078967,5.13950046840077,0.377210159511796,0,1.53717573971964,0.516856586336442,0.363533729477506,0.356497378384721,0.948110273807448,0,0,2.04263763452273,8.46287141947158,5.43306471887569,9.85950361145325,13.6551979904551,8.20496560969525,7.0756078858912,3.34911444026059,0.23467170806371,0,1.7642271844397,0.16488625294148,0.161464426695906,0.422190474497091,0.358117032009409,0.164140899745061,0,36.1579338920494,0,27.2430665711454,9.25972636848558,0,0,0,0,0,0,1.90934123603023,2.05618395827738,10.9792512248498,4.53622431451565,5.01811910434725,2.83871332870031,2.56242258131159,2.23164330458407,1.30877970992015,1.03691978633434,0.621339313086926,0,0,0.992750942742586,2.72231663681667,1.93739735216597,1.01373675294467,1.05621514781179,2.0832701575032,0.943734099831398,2.17425708743405,1.44015003128933,0,3.85177909051312,1.84879722896689,0.51968329191118,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.772758376128762,2.62755465631655,6.59345847362154,1.2862102744744,2.50786052017682,123.680653533138,113.240008180766,111.714625120682,76.990225689972,111.668450722615,104.999751737168,110.028667537784,76.1042833448933,90.6284817968409,100.445500479853,0.103787347584177,3.19219898720825,8.19521307619844,7.29320151204882,3.14419743941973,2.20612210140017,5.33392146723877,10.9198580336614,6.09746498224449,7.07552192938633,11.4065684950608,8.48818536237343,5.80577346313271,7.68301828858431,7.63891737109657,6.66811167796303,9.27074607558844,7.7163688185482,10.714233420886,10.3039244094078,8.9146005620208,6.03417740941747,5.96090474868302,8.72078499793971,7.81107857447244,7.36147088657586,9.14639864363863,5.78753365163254,6.92600980613895,8.41713407486608,7.71127617807132,8.86540341380071,7.7753898202241,8.2116525828562,5.98010494041538,10.9916654292696,8.18760629558929,4.51229213501426,3.82576664137687,1.98532277207564,2.55054619182464
|short_description=p1@Grm7
}}

Revision as of 21:28, 4 August 2015

Short description:p1@Grm7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grm7_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000071076, ENSMUST00000172951, ENSMUST00000174018_5end
EntrezGene:108073
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grm7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.58
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.82
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D658.63
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F645.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.55
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I29.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A450.18
corpus striatum, adult.CNhs10487.19-21D883.27
corpus striatum, neonate N00.CNhs11226.630-43F111.94
cortex, adult.CNhs10473.12-14D557.71
cortex, neonate N30.CNhs11107.1392-42F267.00
diencephalon, adult.CNhs10482.20-12F237.82
diencephalon, neonate N30.CNhs11201.1388-42B249.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C611.45
eyeball, embryo E14.CNhs10521.399-16E214.48
eyeball, embryo E15.CNhs10593.426-16C919.45
eyeball, embryo E17.CNhs11023.1261-18D428.63
eyeball, neonate N00.CNhs11207.633-15C640.62
eyeball, neonate N01.CNhs11140.1532-43E743.30
eyeball, neonate N02.CNhs11205.1551-44G834.58
eyeball, neonate N16.CNhs11188.777-19A218.37
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E844.79
hippocampus, neonate N00.CNhs11228.627-43G115.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F88.91
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I27.74
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G74.56
kidney, neonate N10.CNhs11206.758-6D58.60
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C240.46
medulla oblongata, neonate N30.CNhs11200.1396-42A325.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I944.66
ovary, adult.CNhs10507.91-2I711.50
ovary, embryo E18.CNhs11040.505-44H79.44
ovary, neonate N00.CNhs11217.1299-22I412.22
oviduct, adult pregnant day01.CNhs10500.988-6G65.61
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E68.46
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B913.66
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C936.16
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C127.24
spleen, embryo E18.CNhs11011.1271-21F29.26
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G810.98
stomach, embryo E16.CNhs11022.459-17D44.54
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1123.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2113.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3111.71
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D776.99
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4111.67
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5105.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6110.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A776.10
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A890.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9100.45
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.56e-0823
neuroblast (sensu Vertebrata)1.56e-0823
neuron3.86e-0833
neuronal stem cell3.86e-0833
neuroblast3.86e-0833
electrically signaling cell3.86e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm1.54e-2364
neural plate1.54e-2364
presumptive neural plate1.54e-2364
central nervous system1.97e-2173
nervous system3.33e-2175
ectoderm-derived structure3.52e-2095
ectoderm3.52e-2095
presumptive ectoderm3.52e-2095
regional part of nervous system3.87e-2054
pre-chordal neural plate2.44e-1949
neural tube6.19e-1952
neural rod6.19e-1952
future spinal cord6.19e-1952
neural keel6.19e-1952
ecto-epithelium1.16e-1873
brain1.03e-1547
future brain1.03e-1547
regional part of brain4.63e-1546
anterior neural tube1.71e-1440
structure with developmental contribution from neural crest5.21e-1492
regional part of forebrain8.01e-1439
forebrain8.01e-1439
future forebrain8.01e-1439
gray matter1.23e-1334
brain grey matter1.54e-1029
regional part of telencephalon1.54e-1029
telencephalon1.54e-1029
occipital lobe4.17e-0910
visual cortex4.17e-0910
neocortex4.17e-0910
regional part of cerebral cortex1.49e-0717
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