FFCP PHASE1:Mm9::chr10:80847202..80847252,+: Difference between revisions
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{{FFCP|EntrezGene=102115|HGNC=|UniProt=D3Z7J7,Q99LN9|association_with_transcript=0bp_to_ENSMUST00000142346,ENSMUST00000144647,ENSMUST00000145416_5end|description=CAGE_peak_2_at_Dohh_5end|id=chr10:80847202..80847252,+|ontology_enrichment_celltype=CL:0000548!5.17e-14!115;CL:0000004!5.17e-14!115;CL:0000255!5.17e-14!115;CL:0002371!2.78e-12!118;CL:0000144!1.70e-11!121;CL:0000012!1.70e-11!121;CL:0000034!2.29e-08!97;CL:0000723!4.83e-08!91;CL:0000048!4.83e-08!91;CL:0000055!6.34e-08!50;CL:0002321!1.60e-07!70;CL:0000220!1.60e-07!70;CL:0000221!2.90e-07!44;CL:0000133!2.90e-07!44;CL:0002319!5.07e-07!43|ontology_enrichment_celltype_v019_2=CL:0000034,2.29e-08,97;CL:0000723,4.83e-08,91;CL:0000048,4.83e-08,91;CL:0002321,1.60e-07,70;CL:0000221,2.90e-07,44;CL:0000133,2.90e-07,44;CL:0002319,5.07e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.15e-11!75;UBERON:0001016!2.15e-11!75;UBERON:0004121!2.77e-11!102;UBERON:0000924!2.77e-11!102;UBERON:0006601!2.77e-11!102;UBERON:0001017!7.65e-11!73;UBERON:0005743!7.65e-11!73;UBERON:0001049!1.65e-09!52;UBERON:0005068!1.65e-09!52;UBERON:0006241!1.65e-09!52;UBERON:0007135!1.65e-09!52;UBERON:0002020!2.93e-09!34;UBERON:0002616!5.64e-08!49;UBERON:0000955!1.44e-07!50;UBERON:0006238!1.44e-07!50;UBERON:0003080!2.21e-07!40;UBERON:0002780!2.53e-07!39;UBERON:0001890!2.53e-07!39;UBERON:0006240!2.53e-07!39;UBERON:0002791!2.74e-07!29;UBERON:0003528!2.74e-07!29;UBERON:0001893!2.74e-07!29;UBERON:0002346!6.14e-07!71;UBERON:0003075!6.14e-07!71;UBERON:0007284!6.14e-07!71;UBERON:0000033!9.82e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.70e-12,95;UBERON:0000924,8.70e-12,95;UBERON:0006601,8.70e-12,95;UBERON:0001016,2.15e-11,75;UBERON:0001017,7.65e-11,73;UBERON:0000073,7.69e-10,54;UBERON:0001049,1.65e-09,52;UBERON:0005068,1.65e-09,52;UBERON:0006241,1.65e-09,52;UBERON:0007135,1.65e-09,52;UBERON:0010371,2.82e-09,73;UBERON:0002020,2.93e-09,34;UBERON:0002616,1.61e-07,46;UBERON:0002346,1.98e-07,64;UBERON:0003075,1.98e-07,64;UBERON:0007284,1.98e-07,64;UBERON:0003080,2.21e-07,40;UBERON:0002780,2.53e-07,39;UBERON:0001890,2.53e-07,39;UBERON:0006240,2.53e-07,39;UBERON:0003528,2.74e-07,29;UBERON:0002791,2.74e-07,29;UBERON:0001893,2.74e-07,29;UBERON:0000955,4.08e-07,47;UBERON:0006238,4.08e-07,47|phase1_expression=13.6126520039075,11.8651638597383,10.4649825059593,9.98131897312539,10.5188103288733,13.2624624810393,13.0823078733494,5.55230290798778,23.230139155025,20.5976783163354,17.293014790776,19.4644067948621,4.45121897821135,3.4093956943409,12.3250611871795,13.970793449898,27.9824751251259,6.30924330716475,4.2505474417779,4.2438965179803,7.48380953329414,13.3049874609186,10.4479915655574,17.5991665072747,19.0409703285751,12.0588712464154,11.1998119001359,15.0829862880122,15.5819203954227,12.3494763582366,19.9557459589774,52.0725152236898,47.3599886440119,47.5445043046316,11.8429164098023,14.1299448554718,11.0251452381679,2.51118978442145,6.2506827561904,1.57057123192139,1.76469446409304,0,0,15.6112054289716,12.8748702648783,16.702754446713,25.8189143634853,14.3896603211095,16.0370913396164,11.4713640453827,7.55926676776958,15.8127820801469,11.2414346058683,12.3311564141929,8.06625117941913,17.2363822144084,14.0401385569991,13.4074743992135,12.3413041124355,22.7466121086974,11.4089652631112,21.3472055203553,9.78224275722253,24.7472422252385,29.6659908770092,33.3925654024667,23.3688086204356,30.7374644257244,8.60623782160365,13.5005938331691,10.9368979902719,27.9937964715728,26.0624878322904,8.94182834269164,9.96792898589658,9.19218786610021,9.91042928994498,13.9179198512855,15.2070467923681,10.8146755938759,15.7358746996145,13.5437476344758,20.3803589271008,23.0732670112989,15.8910177687883,15.0260578591571,16.5151149726959,13.7935589910722,20.2188936199601,12.0158780569789,2.89864488701678,4.30211938490693,9.51959867190851,9.71465744948071,4.54843492213368,4.03224198387602,7.5839986871146,16.1908806449155,28.0568884971098,28.2671659608272,14.3660288172214,11.5493829672886,5.09610479413291,0,17.5357743219083,20.0154293725328,18.704404465547,6.16592950482924,1.55362730188303,5.49235914539852,14.5727674483554,13.0920155674221,11.761390360059,9.49552635481522,8.46638691377075,7.41432888845085,9.39340877390621,3.61498392299779,3.5384422077995,5.50007289821191,4.85851340612866,2.42437626567611,1.86391761218122,6.44117753425404,8.79676168616511,15.0719662573069,9.70502508497954,19.196887391789,17.0274104277907,11.6836698735762,11.4375150704657,13.5706700281894,16.1656617778817,18.9229438424445,13.714010940931,12.1680947300818,8.86002465497752,9.70374370758726,23.7559392927654,10.9429765060966,10.6698763229417,12.644615743841,7.74267158163002,6.93242162044289,8.43652589476465,9.09607414022434,9.65127762965207,5.17406741478031,9.48499168904506,7.37513712654495,5.98233822157426,10.5213951565236,5.56094498451196,9.05455632957633,7.61393904709391,8.55847347319521,25.9818879305897,19.3010930336036,20.1756084570871,6.83515049367156,12.8989332989603,6.482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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:102115 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z7J7,uniprot:Q99LN9 | |||
|association_with_transcript=0bp_to_ENSMUST00000142346,ENSMUST00000144647,ENSMUST00000145416_5end | |||
|cluster_id=chr10:80847202..80847252,+ | |||
|description=CAGE_peak_2_at_Dohh_5end | |||
|id=chr10:80847202..80847252,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.17e-14!115;CL:0000004!5.17e-14!115;CL:0000255!5.17e-14!115;CL:0002371!2.78e-12!118;CL:0000144!1.70e-11!121;CL:0000012!1.70e-11!121;CL:0000034!2.29e-08!97;CL:0000723!4.83e-08!91;CL:0000048!4.83e-08!91;CL:0000055!6.34e-08!50;CL:0002321!1.60e-07!70;CL:0000220!1.60e-07!70;CL:0000221!2.90e-07!44;CL:0000133!2.90e-07!44;CL:0002319!5.07e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.29e-08,97;CL:0000723,4.83e-08,91;CL:0000048,4.83e-08,91;CL:0002321,1.60e-07,70;CL:0000221,2.90e-07,44;CL:0000133,2.90e-07,44;CL:0002319,5.07e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.15e-11!75;UBERON:0001016!2.15e-11!75;UBERON:0004121!2.77e-11!102;UBERON:0000924!2.77e-11!102;UBERON:0006601!2.77e-11!102;UBERON:0001017!7.65e-11!73;UBERON:0005743!7.65e-11!73;UBERON:0001049!1.65e-09!52;UBERON:0005068!1.65e-09!52;UBERON:0006241!1.65e-09!52;UBERON:0007135!1.65e-09!52;UBERON:0002020!2.93e-09!34;UBERON:0002616!5.64e-08!49;UBERON:0000955!1.44e-07!50;UBERON:0006238!1.44e-07!50;UBERON:0003080!2.21e-07!40;UBERON:0002780!2.53e-07!39;UBERON:0001890!2.53e-07!39;UBERON:0006240!2.53e-07!39;UBERON:0002791!2.74e-07!29;UBERON:0003528!2.74e-07!29;UBERON:0001893!2.74e-07!29;UBERON:0002346!6.14e-07!71;UBERON:0003075!6.14e-07!71;UBERON:0007284!6.14e-07!71;UBERON:0000033!9.82e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.70e-12,95;UBERON:0000924,8.70e-12,95;UBERON:0006601,8.70e-12,95;UBERON:0001016,2.15e-11,75;UBERON:0001017,7.65e-11,73;UBERON:0000073,7.69e-10,54;UBERON:0001049,1.65e-09,52;UBERON:0005068,1.65e-09,52;UBERON:0006241,1.65e-09,52;UBERON:0007135,1.65e-09,52;UBERON:0010371,2.82e-09,73;UBERON:0002020,2.93e-09,34;UBERON:0002616,1.61e-07,46;UBERON:0002346,1.98e-07,64;UBERON:0003075,1.98e-07,64;UBERON:0007284,1.98e-07,64;UBERON:0003080,2.21e-07,40;UBERON:0002780,2.53e-07,39;UBERON:0001890,2.53e-07,39;UBERON:0006240,2.53e-07,39;UBERON:0003528,2.74e-07,29;UBERON:0002791,2.74e-07,29;UBERON:0001893,2.74e-07,29;UBERON:0000955,4.08e-07,47;UBERON:0006238,4.08e-07,47 | |||
|phase1_expression=13.6126520039075,11.8651638597383,10.4649825059593,9.98131897312539,10.5188103288733,13.2624624810393,13.0823078733494,5.55230290798778,23.230139155025,20.5976783163354,17.293014790776,19.4644067948621,4.45121897821135,3.4093956943409,12.3250611871795,13.970793449898,27.9824751251259,6.30924330716475,4.2505474417779,4.2438965179803,7.48380953329414,13.3049874609186,10.4479915655574,17.5991665072747,19.0409703285751,12.0588712464154,11.1998119001359,15.0829862880122,15.5819203954227,12.3494763582366,19.9557459589774,52.0725152236898,47.3599886440119,47.5445043046316,11.8429164098023,14.1299448554718,11.0251452381679,2.51118978442145,6.2506827561904,1.57057123192139,1.76469446409304,0,0,15.6112054289716,12.8748702648783,16.702754446713,25.8189143634853,14.3896603211095,16.0370913396164,11.4713640453827,7.55926676776958,15.8127820801469,11.2414346058683,12.3311564141929,8.06625117941913,17.2363822144084,14.0401385569991,13.4074743992135,12.3413041124355,22.7466121086974,11.4089652631112,21.3472055203553,9.78224275722253,24.7472422252385,29.6659908770092,33.3925654024667,23.3688086204356,30.7374644257244,8.60623782160365,13.5005938331691,10.9368979902719,27.9937964715728,26.0624878322904,8.94182834269164,9.96792898589658,9.19218786610021,9.91042928994498,13.9179198512855,15.2070467923681,10.8146755938759,15.7358746996145,13.5437476344758,20.3803589271008,23.0732670112989,15.8910177687883,15.0260578591571,16.5151149726959,13.7935589910722,20.2188936199601,12.0158780569789,2.89864488701678,4.30211938490693,9.51959867190851,9.71465744948071,4.54843492213368,4.03224198387602,7.5839986871146,16.1908806449155,28.0568884971098,28.2671659608272,14.3660288172214,11.5493829672886,5.09610479413291,0,17.5357743219083,20.0154293725328,18.704404465547,6.16592950482924,1.55362730188303,5.49235914539852,14.5727674483554,13.0920155674221,11.761390360059,9.49552635481522,8.46638691377075,7.41432888845085,9.39340877390621,3.61498392299779,3.5384422077995,5.50007289821191,4.85851340612866,2.42437626567611,1.86391761218122,6.44117753425404,8.79676168616511,15.0719662573069,9.70502508497954,19.196887391789,17.0274104277907,11.6836698735762,11.4375150704657,13.5706700281894,16.1656617778817,18.9229438424445,13.714010940931,12.1680947300818,8.86002465497752,9.70374370758726,23.7559392927654,10.9429765060966,10.6698763229417,12.644615743841,7.74267158163002,6.93242162044289,8.43652589476465,9.09607414022434,9.65127762965207,5.17406741478031,9.48499168904506,7.37513712654495,5.98233822157426,10.5213951565236,5.56094498451196,9.05455632957633,7.61393904709391,8.55847347319521,25.9818879305897,19.3010930336036,20.1756084570871,6.83515049367156,12.8989332989603,6.48223421259654,6.62885259638589,5.3126342571799,7.0962871928194,7.67362017676346,8.85302224618743,7.23945122676451,9.05079174524142,5.08919138645195,8.10688095458557,9.21059920779594,8.78200461164202,6.44190810049784,10.9350773253346,11.4224119741006,6.93879444265976,9.52022039988759,8.53153002140936,7.66381017139447,7.21657783403723,5.24377164020691,6.0042071838115,8.17970192284004,11.3886974770683,10.7054320570607,8.79673230800943,7.75930240960488,7.79856348476481,10.7858329038507,6.91641759599022,9.55878111620963,9.48339504765408,9.25412952138803,10.1436962105772,6.92414514674068,10.0855293327165,8.06561928738663,6.57659986092276,6.19962621514329,5.80895293013087,9.37818445805684,7.70776830426587,7.84171996865642,17.2971915699619,11.6928298440124,10.7515864335907,12.3000351473733,12.9859184408524,9.49397253587675,12.6465476884528,11.5315793538994,4.31304619582064,8.93138274404408,6.86482880852033,3.78868316920668,8.61107584905178,13.0259750768109,4.0645701836653,11.7484675297701,6.19266910479698,6.45031325945715,6.57132695207806,5.19269398069629,6.66522194480839,6.63454402716516,5.51723004371669,8.858587585951,5.10255259703959,4.26044618260919,3.45369963731791,5.93061140184197,6.03165135757089,9.79030230873677,33.4399705652945,16.2802680319792,9.31193421929193,15.589154316763,11.3115112309906,4.03953483526997,8.20321370482267,11.3227235846025,8.18608911384636,9.31978312014953,11.3627323782021,9.34152551603147,14.1683745586213,13.4437694639203,8.30104333687699,7.06906896127976,5.81954349353901,10.1497394090335,10.750539317336,5.93892442701128,11.9470624505967,11.8962511715941,14.2092071773433,14.7111962209601,14.7650946440386,11.9899707698132,14.4719844174204,9.45187696641514,10.3384239731569,15.485801138855,22.1379078007497,12.3762651897824,5.7874732978144,9.00305470156551,12.5477923269272,9.85950361145325,8.86701168211368,13.5560301377574,13.657568709976,20.0946866415636,9.1521966144847,8.26145076368899,11.467476698858,7.91454014119104,10.8181165886257,10.0119455380739,22.2032559845834,24.7852758615042,8.45294426226567,12.4234952347041,7.51831875510552,9.70018279427146,7.40778109478847,13.1857919903284,6.56132293060921,8.00723606222829,7.81900777971734,6.9975726161829,8.153798454461,8.59203556213602,8.06656783631895,5.89626454667861,6.58832579012988,8.363531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| |||
|short_description=p2@Dohh | |||
}} |
Revision as of 21:18, 4 August 2015
Short description: | p2@Dohh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dohh_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000142346, ENSMUST00000144647, ENSMUST00000145416_5end |
EntrezGene: | 102115 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.29e-08 | 97 |
somatic stem cell | 4.83e-08 | 91 |
multi fate stem cell | 4.83e-08 | 91 |
embryonic cell | 1.60e-07 | 70 |
ectodermal cell | 2.90e-07 | 44 |
neurectodermal cell | 2.90e-07 | 44 |
neural cell | 5.07e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.70e-12 | 95 |
ectoderm | 8.70e-12 | 95 |
presumptive ectoderm | 8.70e-12 | 95 |
nervous system | 2.15e-11 | 75 |
central nervous system | 7.65e-11 | 73 |
regional part of nervous system | 7.69e-10 | 54 |
neural tube | 1.65e-09 | 52 |
neural rod | 1.65e-09 | 52 |
future spinal cord | 1.65e-09 | 52 |
neural keel | 1.65e-09 | 52 |
ecto-epithelium | 2.82e-09 | 73 |
gray matter | 2.93e-09 | 34 |
regional part of brain | 1.61e-07 | 46 |
neurectoderm | 1.98e-07 | 64 |
neural plate | 1.98e-07 | 64 |
presumptive neural plate | 1.98e-07 | 64 |
anterior neural tube | 2.21e-07 | 40 |
regional part of forebrain | 2.53e-07 | 39 |
forebrain | 2.53e-07 | 39 |
future forebrain | 2.53e-07 | 39 |
brain grey matter | 2.74e-07 | 29 |
regional part of telencephalon | 2.74e-07 | 29 |
telencephalon | 2.74e-07 | 29 |
brain | 4.08e-07 | 47 |
future brain | 4.08e-07 | 47 |