FFCP PHASE1:Mm9::chr5:99765762..99765773,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=440 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:99765762..99765773,+ | |||
|description=CAGE_peak_at_chr5:99765762..99765773,+ | |description=CAGE_peak_at_chr5:99765762..99765773,+ | ||
|id=chr5:99765762..99765773,+ | |id=chr5:99765762..99765773,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.85e-13!32;CL:0002032!1.85e-13!32;CL:0000037!1.85e-13!32;CL:0000566!1.85e-13!32;CL:0000837!1.85e-13!32;CL:0000049!4.15e-10!19;CL:0002320!7.16e-10!46;CL:0000134!7.16e-10!46;CL:0000034!1.12e-08!97;CL:0000219!6.32e-08!54;CL:0000553!3.57e-07!6;CL:0000556!3.57e-07!6;CL:0002031!6.25e-07!25;CL:0000063!7.25e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.51e-08,19;CL:0000945,4.65e-08,1;CL:0000236,4.65e-08,1;CL:0000826,4.65e-08,1;CL:0000034,5.43e-08,97;CL:0000213,3.16e-07,1;CL:0002078,3.16e-07,1;CL:0000115,3.16e-07,1;CL:0002262,3.16e-07,1;CL:1000398,3.16e-07,1;CL:0000988,8.41e-07,32;CL:0002032,8.41e-07,32;CL:0000037,8.41e-07,32;CL:0000837,8.41e-07,32 | |||
|ontology_enrichment_disease=DOID:0060100!5.76e-09!3;DOID:4045!5.76e-09!3 | |ontology_enrichment_disease=DOID:0060100!5.76e-09!3;DOID:4045!5.76e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.17e-09,3;DOID:4045,2.17e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!7.16e-10!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.16e-07,1;UBERON:0001281,3.16e-07,1;UBERON:0000353,3.16e-07,1;UBERON:0003497,3.16e-07,1;UBERON:0003909,3.16e-07,1;UBERON:0003928,3.16e-07,1;UBERON:0003835,3.16e-07,1;UBERON:0003513,3.16e-07,1;UBERON:0001280,3.16e-07,1;UBERON:0004647,3.16e-07,1;UBERON:0002294,3.16e-07,1;UBERON:0001173,3.16e-07,1;UBERON:0004912,3.16e-07,1;UBERON:0005171,3.16e-07,1 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.774739940649458,0.703943610758334,0.234064526321993,0.171217968225505,0,0,0,0.333109761815663,0,0,0.473193248037357,1.23402990245165,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,1.5626706890476,0.523523743973798,8.2352408324342,3.41522742479223,0.971020706062307,0,0,0,0,0,0,0,0,0,12.4159128482725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15667224110656,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,3.08817488537658,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0.27338845544205,0,2.88963330989554,2.23922323717853,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0.774739940649458,0.703943610758334,0.234064526321993,0.171217968225505,0,0,0,0.333109761815663,0,0,0.473193248037357,1.23402990245165,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,1.5626706890476,0.523523743973798,8.2352408324342,3.41522742479223,0.971020706062307,0,0,0,0,0,0,0,0,0,12.4159128482725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15667224110656,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,3.08817488537658,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0.27338845544205,0,2.88963330989554,2.23922323717853,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:99765762..99765773,+ | |short_description=p@chr5:99765762..99765773,+ | ||
}} | }} |
Latest revision as of 20:39, 4 August 2015
Short description: | p@chr5:99765762..99765773, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:99765762..99765773, + |
Coexpression cluster: | MCL_coexpression_mm9:440 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.51e-08 | 19 |
lymphocyte of B lineage | 4.65e-08 | 1 |
B cell | 4.65e-08 | 1 |
pro-B cell | 4.65e-08 | 1 |
stem cell | 5.43e-08 | 97 |
lining cell | 3.16e-07 | 1 |
meso-epithelial cell | 3.16e-07 | 1 |
endothelial cell | 3.16e-07 | 1 |
endothelial cell of sinusoid | 3.16e-07 | 1 |
endothelial cell of hepatic sinusoid | 3.16e-07 | 1 |
hematopoietic cell | 8.41e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.41e-07 | 32 |
hematopoietic stem cell | 8.41e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.41e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.16e-07 | 1 |
hepatic sinusoid | 3.16e-07 | 1 |
parenchyma | 3.16e-07 | 1 |
abdomen blood vessel | 3.16e-07 | 1 |
sinusoid | 3.16e-07 | 1 |
digestive system duct | 3.16e-07 | 1 |
abdominal segment blood vessel | 3.16e-07 | 1 |
trunk blood vessel | 3.16e-07 | 1 |
liver parenchyma | 3.16e-07 | 1 |
liver lobule | 3.16e-07 | 1 |
biliary system | 3.16e-07 | 1 |
biliary tree | 3.16e-07 | 1 |
biliary bud | 3.16e-07 | 1 |
hepatic duct | 3.16e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.17e-09 | 3 |
muscle cancer | 2.17e-09 | 3 |