FFCP PHASE1:Mm9::chr1:136763132..136763143,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=93 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:136763132..136763143,- | |||
|description=CAGE_peak_at_chr1:136763132..136763143,- | |description=CAGE_peak_at_chr1:136763132..136763143,- | ||
|id=chr1:136763132..136763143,- | |id=chr1:136763132..136763143,- | ||
|ontology_enrichment_celltype=CL:0002609!4.04e-11!6;CL:0000117!2.60e-07!23;CL:0000337!2.60e-07!23;CL:0002608!3.31e-07!3 | |ontology_enrichment_celltype=CL:0002609!4.04e-11!6;CL:0000117!2.60e-07!23;CL:0000337!2.60e-07!23;CL:0002608!3.31e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002608,1.75e-43,3;CL:0002609,3.12e-22,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!5.13e-22!29;UBERON:0003528!5.13e-22!29;UBERON:0001893!5.13e-22!29;UBERON:0003080!4.29e-20!40;UBERON:0002020!6.15e-20!34;UBERON:0002780!7.86e-19!39;UBERON:0001890!7.86e-19!39;UBERON:0006240!7.86e-19!39;UBERON:0000955!3.45e-18!50;UBERON:0006238!3.45e-18!50;UBERON:0001049!5.63e-17!52;UBERON:0005068!5.63e-17!52;UBERON:0006241!5.63e-17!52;UBERON:0007135!5.63e-17!52;UBERON:0002616!8.22e-17!49;UBERON:0000956!2.46e-15!21;UBERON:0001869!2.46e-15!21;UBERON:0000203!2.46e-15!21;UBERON:0003056!3.16e-15!49;UBERON:0000033!2.98e-14!63;UBERON:0001017!1.60e-12!73;UBERON:0005743!1.60e-12!73;UBERON:0000073!5.38e-12!75;UBERON:0001016!5.38e-12!75;UBERON:0002346!1.23e-10!71;UBERON:0003075!1.23e-10!71;UBERON:0007284!1.23e-10!71;UBERON:0002619!3.25e-10!17;UBERON:0007811!1.29e-08!86;UBERON:0000153!4.50e-08!94;UBERON:0002420!7.56e-08!8;UBERON:0007245!7.56e-08!8;UBERON:0010009!7.56e-08!8;UBERON:0010011!7.56e-08!8;UBERON:0000454!7.56e-08!8;UBERON:0004121!1.01e-07!102;UBERON:0000924!1.01e-07!102;UBERON:0006601!1.01e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,3.48e-19,7;UBERON:0003022,3.48e-19,7;UBERON:0002421,3.48e-19,7;UBERON:0000349,3.48e-19,7;UBERON:0002600,3.48e-19,7;UBERON:0002619,4.13e-14,17;UBERON:0003528,6.34e-13,29;UBERON:0002791,6.34e-13,29;UBERON:0001893,6.34e-13,29;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0000956,1.55e-11,21;UBERON:0001869,1.55e-11,21;UBERON:0000203,1.55e-11,21;UBERON:0002020,4.32e-11,34;UBERON:0002780,1.01e-09,39;UBERON:0001890,1.01e-09,39;UBERON:0006240,1.01e-09,39;UBERON:0003080,1.73e-09,40;UBERON:0002616,2.67e-08,46;UBERON:0003056,8.18e-08,49;UBERON:0001017,1.48e-07,73;UBERON:0001049,2.21e-07,52;UBERON:0005068,2.21e-07,52;UBERON:0006241,2.21e-07,52;UBERON:0007135,2.21e-07,52;UBERON:0001016,2.31e-07,75;UBERON:0000073,4.03e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.420649922702764,0.285650984403804,0,1.5923803897944,1.53352753629178,1.83843757322004,0,0,0,0.131886287730194,0.457438218012048,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,3.5183218591602,0.695297280769106,0.255715457330331,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,99.2882867743384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.420649922702764,0.285650984403804,0,1.5923803897944,1.53352753629178,1.83843757322004,0,0,0,0.131886287730194,0.457438218012048,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,3.5183218591602,0.695297280769106,0.255715457330331,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,99.2882867743384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:136763132..136763143,- | |short_description=p@chr1:136763132..136763143,- | ||
}} | }} |
Latest revision as of 20:32, 4 August 2015
Short description: | p@chr1:136763132..136763143, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:136763132..136763143, - |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 1.75e-43 | 3 |
neuron of cerebral cortex | 3.12e-22 | 6 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 3.48e-19 | 7 |
lobe parts of cerebral cortex | 3.48e-19 | 7 |
hippocampal formation | 3.48e-19 | 7 |
limbic system | 3.48e-19 | 7 |
limbic lobe | 3.48e-19 | 7 |
regional part of cerebral cortex | 4.13e-14 | 17 |
brain grey matter | 6.34e-13 | 29 |
regional part of telencephalon | 6.34e-13 | 29 |
telencephalon | 6.34e-13 | 29 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
cerebral cortex | 1.55e-11 | 21 |
cerebral hemisphere | 1.55e-11 | 21 |
pallium | 1.55e-11 | 21 |
gray matter | 4.32e-11 | 34 |
regional part of forebrain | 1.01e-09 | 39 |
forebrain | 1.01e-09 | 39 |
future forebrain | 1.01e-09 | 39 |
anterior neural tube | 1.73e-09 | 40 |
regional part of brain | 2.67e-08 | 46 |
pre-chordal neural plate | 8.18e-08 | 49 |
central nervous system | 1.48e-07 | 73 |
neural tube | 2.21e-07 | 52 |
neural rod | 2.21e-07 | 52 |
future spinal cord | 2.21e-07 | 52 |
neural keel | 2.21e-07 | 52 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 4.03e-07 | 54 |