FFCP PHASE1:Mm9::chr2:24618676..24618698,-: Difference between revisions
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{{FFCP|EntrezGene=12287|HGNC=|MCL_coexpression_id=13|UniProt=A2AIS0,A2AIR8|association_with_transcript=-4bp_to_ENSMUST00000070864,NM_007579,uc008ipe.1,uc008ipf.1_5end|description=CAGE_peak_1_at_Cacna1b_5end|id=chr2:24618676..24618698,-|ontology_enrichment_celltype=CL:0000540!2.13e-18!33;CL:0000047!2.13e-18!33;CL:0000031!2.13e-18!33;CL:0000404!2.13e-18!33;CL:0000117!3.25e-15!23;CL:0000337!3.25e-15!23;CL:0000221!2.21e-14!44;CL:0000133!2.21e-14!44;CL:0002319!2.94e-14!43;CL:0000393!4.98e-14!39;CL:0000211!4.98e-14!39;CL:0000055!1.31e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,9.34e-22,33;CL:0000047,9.34e-22,33;CL:0000031,9.34e-22,33;CL:0000404,9.34e-22,33;CL:0000117,2.34e-18,23;CL:0000337,2.34e-18,23;CL:0000221,1.73e-16,44;CL:0000133,1.73e-16,44;CL:0002319,2.47e-16,43;CL:0000393,4.40e-16,39;CL:0000211,4.40e-16,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.35e-31!75;UBERON:0001016!3.35e-31!75;UBERON:0001017!5.28e-31!73;UBERON:0005743!5.28e-31!73;UBERON:0004121!2.43e-28!102;UBERON:0000924!2.43e-28!102;UBERON:0006601!2.43e-28!102;UBERON:0002346!4.08e-28!71;UBERON:0003075!4.08e-28!71;UBERON:0007284!4.08e-28!71;UBERON:0001049!2.09e-23!52;UBERON:0005068!2.09e-23!52;UBERON:0006241!2.09e-23!52;UBERON:0007135!2.09e-23!52;UBERON:0000033!1.82e-22!63;UBERON:0000955!7.73e-22!50;UBERON:0006238!7.73e-22!50;UBERON:0002616!2.41e-21!49;UBERON:0003056!3.40e-20!49;UBERON:0003080!3.64e-18!40;UBERON:0002020!3.67e-18!34;UBERON:0002780!1.42e-17!39;UBERON:0001890!1.42e-17!39;UBERON:0006240!1.42e-17!39;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0007811!1.70e-12!86;UBERON:0000153!1.51e-10!94;UBERON:0000956!9.25e-10!21;UBERON:0001869!9.25e-10!21;UBERON:0000203!9.25e-10!21;UBERON:0002619!6.40e-08!17;UBERON:0002021!2.25e-07!10;UBERON:0000411!2.25e-07!10;UBERON:0001950!2.25e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.01e-37,75;UBERON:0001017,8.93e-37,73;UBERON:0002346,1.78e-33,64;UBERON:0003075,1.78e-33,64;UBERON:0007284,1.78e-33,64;UBERON:0004121,7.87e-33,95;UBERON:0000924,7.87e-33,95;UBERON:0006601,7.87e-33,95;UBERON:0000073,7.59e-31,54;UBERON:0001049,8.29e-29,52;UBERON:0005068,8.29e-29,52;UBERON:0006241,8.29e-29,52;UBERON:0007135,8.29e-29,52;UBERON:0010371,5.46e-27,73;UBERON:0003056,1.76e-24,49;UBERON:0000955,2.92e-24,47;UBERON:0006238,2.92e-24,47;UBERON:0002616,1.15e-23,46;UBERON:0003080,5.57e-22,40;UBERON:0002020,5.63e-22,34;UBERON:0002780,2.97e-21,39;UBERON:0001890,2.97e-21,39;UBERON:0006240,2.97e-21,39;UBERON:0010314,9.66e-21,92;UBERON:0003528,1.20e-17,29;UBERON:0002791,1.20e-17,29;UBERON:0001893,1.20e-17,29;UBERON:0000956,1.23e-11,21;UBERON:0001869,1.23e-11,21;UBERON:0000203,1.23e-11,21;UBERON:0002619,2.24e-09,17;UBERON:0002021,1.03e-08,10;UBERON:0000411,1.03e-08,10;UBERON:0001950,1.03e-08,10;UBERON:0002420,2.22e-07,8;UBERON:0007245,2.22e-07,8;UBERON:0010009,2.22e-07,8;UBERON:0010011,2.22e-07,8;UBERON:0000454,2.22e-07,8;UBERON:0003076,2.99e-07,12;UBERON:0003057,2.99e-07,12|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56885282344521,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,1.56478268869608,0,0.219686182734472,0,0.419959264876088,1.43752564364972,0.167782606057736,0,0,0.514518872071894,0,0.515672092277442,48.3536341454439,38.6163414868584,47.5373552629634,1.35537812827653,1.77858959222228,0,0,0,0,0.768436610643109,16.071889907814,11.0704869431986,11.1472229516232,67.4136323192976,28.7129103237098,15.6788222995141,18.3064849644831,20.2228133054205,48.450987639731,35.4970799876822,45.0067142440793,53.2820602429983,35.5886933613374,25.5247551572812,28.1974828991395,62.4666497135165,62.0360885973849,63.0505172913649,70.6163536763551,39.8894814066143,1.51452386666368,2.64500460373749,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,2.39433813620357,0,0,0,0,0,0,0.91347103775248,0.258937883647172,3.11728492036132,3.81667718885499,5.1759131313064,2.99800146432876,4.06951129492081,3.05730638552832,0.376999773989026,0,0.144599356919912,0,0,0,0.484875253135222,0,16.9812862266697,22.2013509222262,0,0,0,0,26.3631525352488,25.6200337578431,20.8586224507355,35.6339856394167,42.4487659168349,22.0255327233134,33.2594589288903,0.407357455401265,0.124406970610093,0,1.47309299120532,1.04096354370163,3.90833577536904,4.68161537493908,6.17889753126432,10.4776208693045,7.81493693737584,7.40243624021858,5.17406741478031,0,0.567318240503458,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0.703578179943289,0.540186184383045,0,0,0.308534225774757,0,0.268273401399619,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,22.9216043934899,14.6124549578584,0.330418782983798,0.793351699990633,0.853153002140936,2.32236671860439,1.67527699718721,2.01683524623343,1.55664630691409,0.951128130562796,0.474529061544512,1.97638745668813,1.75934646160189,2.38747766449381,1.9496408711912,0.89881940865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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12287 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AIS0,uniprot:A2AIR8 | |||
|association_with_transcript=-4bp_to_ENSMUST00000070864,NM_007579,uc008ipe.1,uc008ipf.1_5end | |||
|cluster_id=chr2:24618676..24618698,- | |||
|description=CAGE_peak_1_at_Cacna1b_5end | |||
|id=chr2:24618676..24618698,- | |||
|ontology_enrichment_celltype=CL:0000540!2.13e-18!33;CL:0000047!2.13e-18!33;CL:0000031!2.13e-18!33;CL:0000404!2.13e-18!33;CL:0000117!3.25e-15!23;CL:0000337!3.25e-15!23;CL:0000221!2.21e-14!44;CL:0000133!2.21e-14!44;CL:0002319!2.94e-14!43;CL:0000393!4.98e-14!39;CL:0000211!4.98e-14!39;CL:0000055!1.31e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.34e-22,33;CL:0000047,9.34e-22,33;CL:0000031,9.34e-22,33;CL:0000404,9.34e-22,33;CL:0000117,2.34e-18,23;CL:0000337,2.34e-18,23;CL:0000221,1.73e-16,44;CL:0000133,1.73e-16,44;CL:0002319,2.47e-16,43;CL:0000393,4.40e-16,39;CL:0000211,4.40e-16,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.35e-31!75;UBERON:0001016!3.35e-31!75;UBERON:0001017!5.28e-31!73;UBERON:0005743!5.28e-31!73;UBERON:0004121!2.43e-28!102;UBERON:0000924!2.43e-28!102;UBERON:0006601!2.43e-28!102;UBERON:0002346!4.08e-28!71;UBERON:0003075!4.08e-28!71;UBERON:0007284!4.08e-28!71;UBERON:0001049!2.09e-23!52;UBERON:0005068!2.09e-23!52;UBERON:0006241!2.09e-23!52;UBERON:0007135!2.09e-23!52;UBERON:0000033!1.82e-22!63;UBERON:0000955!7.73e-22!50;UBERON:0006238!7.73e-22!50;UBERON:0002616!2.41e-21!49;UBERON:0003056!3.40e-20!49;UBERON:0003080!3.64e-18!40;UBERON:0002020!3.67e-18!34;UBERON:0002780!1.42e-17!39;UBERON:0001890!1.42e-17!39;UBERON:0006240!1.42e-17!39;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0007811!1.70e-12!86;UBERON:0000153!1.51e-10!94;UBERON:0000956!9.25e-10!21;UBERON:0001869!9.25e-10!21;UBERON:0000203!9.25e-10!21;UBERON:0002619!6.40e-08!17;UBERON:0002021!2.25e-07!10;UBERON:0000411!2.25e-07!10;UBERON:0001950!2.25e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.01e-37,75;UBERON:0001017,8.93e-37,73;UBERON:0002346,1.78e-33,64;UBERON:0003075,1.78e-33,64;UBERON:0007284,1.78e-33,64;UBERON:0004121,7.87e-33,95;UBERON:0000924,7.87e-33,95;UBERON:0006601,7.87e-33,95;UBERON:0000073,7.59e-31,54;UBERON:0001049,8.29e-29,52;UBERON:0005068,8.29e-29,52;UBERON:0006241,8.29e-29,52;UBERON:0007135,8.29e-29,52;UBERON:0010371,5.46e-27,73;UBERON:0003056,1.76e-24,49;UBERON:0000955,2.92e-24,47;UBERON:0006238,2.92e-24,47;UBERON:0002616,1.15e-23,46;UBERON:0003080,5.57e-22,40;UBERON:0002020,5.63e-22,34;UBERON:0002780,2.97e-21,39;UBERON:0001890,2.97e-21,39;UBERON:0006240,2.97e-21,39;UBERON:0010314,9.66e-21,92;UBERON:0003528,1.20e-17,29;UBERON:0002791,1.20e-17,29;UBERON:0001893,1.20e-17,29;UBERON:0000956,1.23e-11,21;UBERON:0001869,1.23e-11,21;UBERON:0000203,1.23e-11,21;UBERON:0002619,2.24e-09,17;UBERON:0002021,1.03e-08,10;UBERON:0000411,1.03e-08,10;UBERON:0001950,1.03e-08,10;UBERON:0002420,2.22e-07,8;UBERON:0007245,2.22e-07,8;UBERON:0010009,2.22e-07,8;UBERON:0010011,2.22e-07,8;UBERON:0000454,2.22e-07,8;UBERON:0003076,2.99e-07,12;UBERON:0003057,2.99e-07,12 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56885282344521,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,1.56478268869608,0,0.219686182734472,0,0.419959264876088,1.43752564364972,0.167782606057736,0,0,0.514518872071894,0,0.515672092277442,48.3536341454439,38.6163414868584,47.5373552629634,1.35537812827653,1.77858959222228,0,0,0,0,0.768436610643109,16.071889907814,11.0704869431986,11.1472229516232,67.4136323192976,28.7129103237098,15.6788222995141,18.3064849644831,20.2228133054205,48.450987639731,35.4970799876822,45.0067142440793,53.2820602429983,35.5886933613374,25.5247551572812,28.1974828991395,62.4666497135165,62.0360885973849,63.0505172913649,70.6163536763551,39.8894814066143,1.51452386666368,2.64500460373749,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,2.39433813620357,0,0,0,0,0,0,0.91347103775248,0.258937883647172,3.11728492036132,3.81667718885499,5.1759131313064,2.99800146432876,4.06951129492081,3.05730638552832,0.376999773989026,0,0.144599356919912,0,0,0,0.484875253135222,0,16.9812862266697,22.2013509222262,0,0,0,0,26.3631525352488,25.6200337578431,20.8586224507355,35.6339856394167,42.4487659168349,22.0255327233134,33.2594589288903,0.407357455401265,0.124406970610093,0,1.47309299120532,1.04096354370163,3.90833577536904,4.68161537493908,6.17889753126432,10.4776208693045,7.81493693737584,7.40243624021858,5.17406741478031,0,0.567318240503458,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0.703578179943289,0.540186184383045,0,0,0.308534225774757,0,0.268273401399619,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,22.9216043934899,14.6124549578584,0.330418782983798,0.793351699990633,0.853153002140936,2.32236671860439,1.67527699718721,2.01683524623343,1.55664630691409,0.951128130562796,0.474529061544512,1.97638745668813,1.75934646160189,2.38747766449381,1.9496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,1.71372768914593,0,0.203651327845314,0,0.49095073923223,0,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.651859905768103,0.169745085775188,0.234690248288502,0.167506257441816,0,0.780534591431195,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,18.7844190285717,21.2153152731888,0,0,8.20321370482267,12.8844785617891,17.6647186140895,5.01834475700359,10.4715376818725,11.3230612315533,9.31064613852257,21.0424217696145,24.1125544547379,13.8168166061377,0,0.890328018336276,0.162886959353576,0.164970122972535,1.32745138339963,0.971122544619926,1.209294227859,0.943025398779491,0,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,0,0,16.6815406819356,1.8006109403131,1.94038025674132,3.00071849044229,3.3694644392032,5.35106452806212,7.73380396829969,12.7875278628132,1.17335854031855,0.42366414172764,1.54369878638473,0,0,0.0603129249281559,0.119372344003136,0,1.1659233465194,17.2445530869774,0,0.82554747185289,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.474503990371703,1.42323626988794,2.16010681643603,2.09088296014469,1.31017538247707,2.15782954215713,1.40510874733071,0.523511883968059,1.16653475962614,0,0,0.149516546043979,0.496375471371293,0.777804753376191,0.904118764344118,1.01373675294467,0.938857909166032,1.5624526181274,2.9360616439199,0.241584120826006,0.576060012515731,0.632022241256357,0.405450430580328,0.205421914329655,0.129920822977795,0.716106782669926,0,0.480781798079875,0.443068581523732,0.100966449948148,0.228620419965,0.302478555410522,0.194915761479505,0.288635524920988,0.233753804363138,0.226730383615211,0,0.0897138566094757,0.167884616364078,1.73870634628971,0.187682475451182,0.183151624267265,0,0,35.5793660848752,31.302116082488,28.0718801585304,37.979553297955,42.4751162257798,40.0358765616541,29.7009900101995,29.2708782095743,24.9228324941313,27.9590568345983,1.03787347584177,6.78342284781753,6.4878770186571,3.16038732188782,3.77303692730368,4.22840069435032,4.22268782823069,4.32673620201678,5.77654577265267,6.06473308233114,4.30914809813408,4.90428487603798,5.15028291084353,5.31408764960415,6.31790158511746,6.19181798667996,6.02598494913249,7.33055037762079,9.47797571847605,6.47675248591348,3.77156177623957,4.79184676630211,7.15308569841963,6.24989591519013,6.58765662907314,6.51532480765909,7.13419094203813,4.73525480588117,5.83957689537206,8.41713407486608,6.99946606932627,7.88035859004508,8.18462086339379,6.35241048862461,4.62975866354739,11.9909077410214,3.97683734357194,4.72716318906256,4.20834330551455,0.882365676478062,0.231867835620421 | |||
|short_description=p1@Cacna1b | |||
}} |
Revision as of 20:04, 4 August 2015
Short description: | p1@Cacna1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacna1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -4bp_to_ENSMUST00000070864, NM_007579, uc008ipe.1, uc008ipf.1_5end |
EntrezGene: | 12287 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.34e-22 | 33 |
neuronal stem cell | 9.34e-22 | 33 |
neuroblast | 9.34e-22 | 33 |
electrically signaling cell | 9.34e-22 | 33 |
CNS neuron (sensu Vertebrata) | 2.34e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.34e-18 | 23 |
ectodermal cell | 1.73e-16 | 44 |
neurectodermal cell | 1.73e-16 | 44 |
neural cell | 2.47e-16 | 43 |
electrically responsive cell | 4.40e-16 | 39 |
electrically active cell | 4.40e-16 | 39 |