FFCP PHASE1:Mm9::chr1:135989858..135989881,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135989858..135989881,+|id=chr1:135989858..135989881,+|ontology_enrichment_celltype=CL:0000063!1.23e-17!66;CL:0002320!6.41e-12!46;CL:0000134!6.41e-12!46;CL:0000988!5.37e-11!32;CL:0002032!5.37e-11!32;CL:0000037!5.37e-11!32;CL:0000566!5.37e-11!32;CL:0000837!5.37e-11!32;CL:0002031!2.90e-10!25;CL:0000219!3.30e-09!54;CL:0000838!4.15e-09!12;CL:0000084!1.92e-08!11;CL:0000827!1.92e-08!11;CL:0000144!2.16e-08!121;CL:0000012!2.16e-08!121;CL:0000542!6.13e-08!13;CL:0000051!6.13e-08!13;CL:0000791!1.13e-07!9;CL:0000789!1.13e-07!9;CL:0002420!1.13e-07!9;CL:0002419!1.13e-07!9;CL:0000790!1.13e-07!9;CL:0000066!1.46e-07!25;CL:0002563!1.51e-07!9;CL:0002251!1.51e-07!9;CL:0002371!2.67e-07!118;CL:0000624!5.26e-07!8;CL:0000738!9.03e-07!17;CL:0002087!9.03e-07!17|ontology_enrichment_celltype_v019_2=CL:0000066,3.24e-18,25;CL:0000791,3.76e-17,9;CL:0000789,3.76e-17,9;CL:0002420,3.76e-17,9;CL:0002419,3.76e-17,9;CL:0000790,3.76e-17,9;CL:0002563,7.92e-17,9;CL:0002251,7.92e-17,9;CL:0000624,1.88e-15,8;CL:0000838,2.64e-15,12;CL:0002320,2.93e-14,46;CL:0000134,2.93e-14,46;CL:0000542,6.01e-14,13;CL:0000051,6.01e-14,13;CL:0002031,7.03e-14,25;CL:0000084,1.14e-13,11;CL:0000827,1.14e-13,11;CL:0000075,1.44e-13,7;CL:0000988,4.29e-13,32;CL:0002032,4.29e-13,32;CL:0000037,4.29e-13,32;CL:0000837,4.29e-13,32;CL:0000034,2.67e-12,97;CL:0000738,4.41e-12,17;CL:0002087,4.41e-12,17;CL:0000239,5.17e-12,6;CL:0000677,5.17e-12,6;CL:0000584,5.17e-12,6;CL:0000223,9.01e-12,20;CL:0000893,1.04e-11,6;CL:0002489,1.04e-11,6;CL:0000898,1.04e-11,6;CL:0000809,1.04e-11,6;CL:0000810,1.04e-11,6;CL:0000895,1.04e-11,6;CL:0000808,1.04e-11,6;CL:0000894,1.04e-11,6;CL:0000806,1.04e-11,6;CL:0000807,1.04e-11,6;CL:0000805,1.04e-11,6;CL:0002425,1.04e-11,6;CL:0002436,1.04e-11,6;CL:0002427,1.04e-11,6;CL:0002428,1.04e-11,6;CL:0002429,1.04e-11,6;CL:0002433,1.04e-11,6;CL:0002431,1.04e-11,6;CL:0002432,1.04e-11,6;CL:0000219,2.49e-11,54;CL:0000723,1.43e-10,91;CL:0000048,1.43e-10,91;CL:0002076,2.54e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,1.39e-08,6;DOID:0060100,2.34e-07,3;DOID:4045,2.34e-07,3|ontology_enrichment_uberon=UBERON:0002384!6.41e-12!46;UBERON:0000485!9.33e-09!11;UBERON:0003350!1.51e-07!9;UBERON:0004808!1.51e-07!9;UBERON:0001277!1.51e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000485,6.63e-20,11;UBERON:0003350,7.92e-17,9;UBERON:0004808,7.92e-17,9;UBERON:0001277,7.92e-17,9;UBERON:0002384,2.93e-14,46;UBERON:0000490,1.87e-11,66;UBERON:0001242,4.76e-11,13;UBERON:0001262,4.76e-11,13;UBERON:0004786,4.76e-11,13;UBERON:0000344,2.54e-09,15;UBERON:0003929,2.68e-08,55|phase1_expression=3.68342348341026,7.67745896806594,5.91499011206397,10.8887116070459,15.5277676283368,3.69334398206158,3.97141489012394,10.4589891987677,7.74337971834167,8.42632294759177,4.28044920563762,1.99430397488341,7.01922992717943,6.90621179110079,0.333109761815663,0.404950534779652,0.699561878128147,1.10411757875383,1.23402990245165,0.84877930359606,0.255129870453209,0.695036658406197,0.783599367416806,0.159992422793407,0,4.59385571292016,1.29228598847722,1.07735616342945,0,0,0.443461021310609,3.81018404075779,3.69038872550742,0,4.04392267651784,3.49092755252834,6.73758875665818,19.2524550138978,16.4080422349998,7.85285615960697,135.881473735164,36.8844561877561,21.3624555333708,0,0.304130793658544,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,4.86569557567435,10.1550699881588,5.04140698713696,0,0,0.515672092277442,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0.151143120213571,11.8844440367688,1.72084775396277,0.679971333707751,3.77792234146472,1.29955283489534,0,0,0.340860645156116,0,0,3.80277233397037,0,0,0,0,0,0.505524445014783,0.22836775943812,0.776813650941515,0.742210695324124,0,0,0,0,0.117588707135705,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.958520996047362,1.79970819298022,0.508280908292259,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.505445516867349,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.12811372028485,0.187403449119458,0,0,0,0,0,0.834141747676794,0.348252166522167,0,0,0,2.31613116403244,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,2.19299981137998,0,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0.379335801906163,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0.739012760666419,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.390267295715598,0,0,0.159454768657487,1.966359776588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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:135989858..135989881,+ | |||
|description=CAGE_peak_at_chr1:135989858..135989881,+ | |||
|id=chr1:135989858..135989881,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.23e-17!66;CL:0002320!6.41e-12!46;CL:0000134!6.41e-12!46;CL:0000988!5.37e-11!32;CL:0002032!5.37e-11!32;CL:0000037!5.37e-11!32;CL:0000566!5.37e-11!32;CL:0000837!5.37e-11!32;CL:0002031!2.90e-10!25;CL:0000219!3.30e-09!54;CL:0000838!4.15e-09!12;CL:0000084!1.92e-08!11;CL:0000827!1.92e-08!11;CL:0000144!2.16e-08!121;CL:0000012!2.16e-08!121;CL:0000542!6.13e-08!13;CL:0000051!6.13e-08!13;CL:0000791!1.13e-07!9;CL:0000789!1.13e-07!9;CL:0002420!1.13e-07!9;CL:0002419!1.13e-07!9;CL:0000790!1.13e-07!9;CL:0000066!1.46e-07!25;CL:0002563!1.51e-07!9;CL:0002251!1.51e-07!9;CL:0002371!2.67e-07!118;CL:0000624!5.26e-07!8;CL:0000738!9.03e-07!17;CL:0002087!9.03e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.24e-18,25;CL:0000791,3.76e-17,9;CL:0000789,3.76e-17,9;CL:0002420,3.76e-17,9;CL:0002419,3.76e-17,9;CL:0000790,3.76e-17,9;CL:0002563,7.92e-17,9;CL:0002251,7.92e-17,9;CL:0000624,1.88e-15,8;CL:0000838,2.64e-15,12;CL:0002320,2.93e-14,46;CL:0000134,2.93e-14,46;CL:0000542,6.01e-14,13;CL:0000051,6.01e-14,13;CL:0002031,7.03e-14,25;CL:0000084,1.14e-13,11;CL:0000827,1.14e-13,11;CL:0000075,1.44e-13,7;CL:0000988,4.29e-13,32;CL:0002032,4.29e-13,32;CL:0000037,4.29e-13,32;CL:0000837,4.29e-13,32;CL:0000034,2.67e-12,97;CL:0000738,4.41e-12,17;CL:0002087,4.41e-12,17;CL:0000239,5.17e-12,6;CL:0000677,5.17e-12,6;CL:0000584,5.17e-12,6;CL:0000223,9.01e-12,20;CL:0000893,1.04e-11,6;CL:0002489,1.04e-11,6;CL:0000898,1.04e-11,6;CL:0000809,1.04e-11,6;CL:0000810,1.04e-11,6;CL:0000895,1.04e-11,6;CL:0000808,1.04e-11,6;CL:0000894,1.04e-11,6;CL:0000806,1.04e-11,6;CL:0000807,1.04e-11,6;CL:0000805,1.04e-11,6;CL:0002425,1.04e-11,6;CL:0002436,1.04e-11,6;CL:0002427,1.04e-11,6;CL:0002428,1.04e-11,6;CL:0002429,1.04e-11,6;CL:0002433,1.04e-11,6;CL:0002431,1.04e-11,6;CL:0002432,1.04e-11,6;CL:0000219,2.49e-11,54;CL:0000723,1.43e-10,91;CL:0000048,1.43e-10,91;CL:0002076,2.54e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.39e-08,6;DOID:0060100,2.34e-07,3;DOID:4045,2.34e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.41e-12!46;UBERON:0000485!9.33e-09!11;UBERON:0003350!1.51e-07!9;UBERON:0004808!1.51e-07!9;UBERON:0001277!1.51e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,6.63e-20,11;UBERON:0003350,7.92e-17,9;UBERON:0004808,7.92e-17,9;UBERON:0001277,7.92e-17,9;UBERON:0002384,2.93e-14,46;UBERON:0000490,1.87e-11,66;UBERON:0001242,4.76e-11,13;UBERON:0001262,4.76e-11,13;UBERON:0004786,4.76e-11,13;UBERON:0000344,2.54e-09,15;UBERON:0003929,2.68e-08,55 | |||
|phase1_expression=3.68342348341026,7.67745896806594,5.91499011206397,10.8887116070459,15.5277676283368,3.69334398206158,3.97141489012394,10.4589891987677,7.74337971834167,8.42632294759177,4.28044920563762,1.99430397488341,7.01922992717943,6.90621179110079,0.333109761815663,0.404950534779652,0.699561878128147,1.10411757875383,1.23402990245165,0.84877930359606,0.255129870453209,0.695036658406197,0.783599367416806,0.159992422793407,0,4.59385571292016,1.29228598847722,1.07735616342945,0,0,0.443461021310609,3.81018404075779,3.69038872550742,0,4.04392267651784,3.49092755252834,6.73758875665818,19.2524550138978,16.4080422349998,7.85285615960697,135.881473735164,36.8844561877561,21.3624555333708,0,0.304130793658544,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,4.86569557567435,10.1550699881588,5.04140698713696,0,0,0.515672092277442,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0.151143120213571,11.8844440367688,1.72084775396277,0.679971333707751,3.77792234146472,1.29955283489534,0,0,0.340860645156116,0,0,3.80277233397037,0,0,0,0,0,0.505524445014783,0.22836775943812,0.776813650941515,0.742210695324124,0,0,0,0,0.117588707135705,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.958520996047362,1.79970819298022,0.508280908292259,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.505445516867349,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.12811372028485,0.187403449119458,0,0,0,0,0,0.834141747676794,0.348252166522167,0,0,0,2.31613116403244,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,2.19299981137998,0,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0.379335801906163,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0.739012760666419,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.390267295715598,0,0,0.159454768657487,1.96635977658886,0,0.433947175744535,1.50791283939272,0,0,0,0,0.117211686592203,0.327869890753351,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,0,0,0.363533729477506,0,0.316036757935816,0,0,2.38307724027652,0.18006109403131,0.129358683782755,0,0.354680467284547,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0.32977250588296,0,0.301564624640779,0.119372344003136,0,0,0,0,0.206386867963223,0.370389054739423,0,0.27338845544205,0.228778173206523,3.39956859987711,2.6590775941495,1.24379976423981,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0.295379054349154,0,0,0,0,0.288635524920988,0.233753804363138,0,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,0,0.341467211508268,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0.290692833264657,0,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr1:135989858..135989881,+ | |||
}} |
Latest revision as of 20:02, 4 August 2015
Short description: | p@chr1:135989858..135989881, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135989858..135989881, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 6.63e-20 | 11 |
epithelium of mucosa | 7.92e-17 | 9 |
gastrointestinal system epithelium | 7.92e-17 | 9 |
intestinal epithelium | 7.92e-17 | 9 |
connective tissue | 2.93e-14 | 46 |
unilaminar epithelium | 1.87e-11 | 66 |
intestinal mucosa | 4.76e-11 | 13 |
wall of intestine | 4.76e-11 | 13 |
gastrointestinal system mucosa | 4.76e-11 | 13 |
mucosa | 2.54e-09 | 15 |
gut epithelium | 2.68e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.39e-08 | 6 |
musculoskeletal system cancer | 2.34e-07 | 3 |
muscle cancer | 2.34e-07 | 3 |