Personal tools

FFCP PHASE1:Mm9::chr4:126698555..126698583,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=71514|HGNC=|UniProt=Q8VIJ6|association_with_transcript=0bp_to_ENSMUST00000030623_5end|description=CAGE_peak_1_at_Sfpq_5end|id=chr4:126698555..126698583,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!9.65e-09!29;UBERON:0002370!2.62e-07!23;UBERON:0000974!2.62e-07!23;UBERON:0004807!2.62e-07!23;UBERON:0005058!2.62e-07!23;UBERON:0003351!2.62e-07!23;UBERON:0009113!2.62e-07!23;UBERON:0003295!2.62e-07!23;UBERON:0009722!2.62e-07!23;UBERON:0005562!2.62e-07!23;UBERON:0007690!2.62e-07!23;UBERON:0003408!8.85e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000153,7.19e-11,43;UBERON:0004177,9.65e-09,29;UBERON:0005057,9.65e-09,29;UBERON:0007811,3.96e-08,36;UBERON:0002370,2.62e-07,23;UBERON:0000974,2.62e-07,23;UBERON:0004807,2.62e-07,23;UBERON:0005058,2.62e-07,23;UBERON:0003351,2.62e-07,23;UBERON:0009113,2.62e-07,23;UBERON:0003295,2.62e-07,23;UBERON:0009722,2.62e-07,23;UBERON:0005562,2.62e-07,23;UBERON:0007690,2.62e-07,23;UBERON:0000077,7.59e-07,35;UBERON:0003408,8.85e-07,24|phase1_expression=533.135512011859,273.596719589259,227.499619694768,278.267074402284,355.13507253196,409.121785649275,420.035527790755,575.760899225989,1212.331686448,1178.98301908388,663.469626873832,749.539205920181,747.804788339507,620.859697979719,491.003788916287,498.899058848531,543.55957930557,525.875429652182,497.176936254409,610.696708937365,309.132359699139,477.78805717866,373.776898257817,239.668649344523,230.097508910372,165.953037629241,222.703952014242,276.018649070624,224.79770521689,260.095093912249,299.114458874006,417.850183136437,565.24453979022,602.230387858667,402.948009553028,450.99459285759,444.885027295702,347.79978514237,279.718053339521,346.049194766681,477.055736793153,409.827290975067,320.436833000561,213.395106468604,210.559886142932,243.38299336639,302.785450262691,301.528791274158,162.567775223509,153.794050167758,302.650643554034,307.630487741039,810.222204652809,1177.26275648441,1100.70719219157,280.670044715218,277.077836420778,192.345690419486,718.628068973291,735.297461188126,747.921056137291,226.686991954249,300.581641085565,146.233704058227,225.46153066527,162.699946322657,271.737300240193,255.889391344155,822.258625606228,773.989044455583,834.990096564987,299.933533623994,280.503047008549,814.441323980229,744.048391514569,941.280037488661,377.697471827903,212.727105249923,237.475700414152,721.1542213087,540.051560185024,648.537146343166,162.484505418804,187.399949140549,228.433380426331,564.213741182074,440.355608711625,585.85345822892,262.618438479482,344.833028767262,587.265454109599,210.80384986044,410.022714225774,213.182760696938,218.324876262417,309.138552097162,239.598180744769,272.518085802314,231.729116105759,249.10440002979,484.360520612004,349.048018566945,293.026025662643,334.201350482066,449.218910098269,417.790418168438,445.872560503039,261.709452316085,730.981645535966,374.667958999618,541.794675490642,457.307148424836,427.09990091822,315.010318754981,459.65425619347,237.384191021757,399.961457794217,491.6378135277,534.304773377724,488.535886841176,509.481383088128,546.939285536531,393.286616170238,493.042862167445,331.554136885699,405.154889560826,730.752444361608,428.930452660287,561.523333435873,360.695859686813,438.743078103063,583.538811212142,368.333734487434,266.199791080874,341.811333300476,282.137556474831,538.017359221221,449.855605726096,360.888099043287,476.019478015204,956.385255775872,666.486200752638,868.979838440615,589.406542555482,784.188689218205,803.913594787432,700.139285910294,513.784894287685,1288.88102974546,1203.09288202767,986.030099814769,767.40425922894,764.351888121169,633.470690903821,554.994421892223,694.231522662904,405.177009079736,513.666422600971,457.219070527509,644.782529903017,652.686024927391,494.450420771947,692.95184105791,559.991003553111,482.856063337494,466.928161058819,442.114565506572,458.070438106406,410.741385384047,398.106100391806,421.395672019358,332.166371430355,317.469466710859,254.992195644706,421.631346871075,640.272498223908,207.833414496809,448.243710494708,908.821235530632,751.75010681224,785.189441835515,588.31084132629,546.605231770691,417.164798064842,344.508098681315,331.37429690471,372.9814498596,315.942877601348,371.991478223281,400.873456259783,292.002505380712,277.403793643334,968.823638068341,774.262169956132,1062.83394739715,743.123695307552,654.395691703569,682.982614091922,535.170813682589,365.482726397495,315.724441689005,250.002654105568,293.784553443365,937.335803913016,800.584787096076,737.99745284709,758.696853993001,642.254776420686,492.701023197047,544.033395919483,632.975925329738,322.884221909184,1752.53443756845,347.207504174714,343.865515772246,379.373474676562,276.989606477832,271.615702527576,414.955665114194,793.779523906561,933.95227998925,821.056979894585,821.181178761469,711.566581612833,612.248244358827,584.620408981965,645.831185403065,545.688995294581,561.918604748985,425.389165002056,346.751443586718,280.619173648132,199.044494799839,257.811294130068,378.658490224658,513.242348126802,297.018591477415,209.10564888049,389.509430214981,220.659590376622,601.989682646218,589.172065143627,756.782396235323,686.318387719729,648.566940253849,797.992740293719,618.145941457564,655.529889295073,626.135840267293,627.540530971789,657.040654429075,512.650872958028,583.135314485802,609.234664137573,508.413879842058,738.295914547299,578.344964473569,430.962607242227,430.550159820167,403.662349250377,438.81124179964,457.325431682702,421.379901250741,426.01754969748,315.201639639246,340.347292719017,400.697415972208,836.203720681405,650.027386008341,613.003920190354,638.424841112185,480.882332255182,469.458355777851,405.242847271532,492.575915225728,309.698487602905,403.787496838635,699.117712471875,744.996864774908,617.242473714747,464.477790516204,532.473078772979,371.34658586643,318.189818250035,790.277823690069,624.113888720785,649.847596540318,638.192332331893,741.429491158841,583.613119849839,678.55389253547,683.942747505717,675.245072008415,305.494597764836,935.721869012998,755.331820376243,524.149919008202,520.629857076027,438.035302874832,396.366314024988,380.040589425095,235.580347785627,278.153732684188,394.550463810198,463.355595598404,708.110362064284,518.877826073458,546.602290435118,431.393810415622,525.284594150829,610.022926480629,646.985588289588,648.450185928596,464.083096106758,336.419047309187,1043.78473143487,590.335826924958,633.829316664149,726.907004560763,878.663022335999,887.906974517473,692.325789235021,777.142291992625,815.808915581033,818.613517088008,801.870650393293,1018.62976949189,765.846259457022,800.723656845929,333.293663914361,554.520911528414,540.256844502263,396.207694619225,373.435485264224,413.464493418954,525.828313271318,458.105226091964,276.366229323485,480.603818067124,406.00685859933,460.607992805275,530.167067530276,269.922512789633,303.66834675066,310.510350106631,346.74732648265,299.980274747543,311.173947362844,1164.07889050413,698.692553325205,717.934812196134,765.543052048058,799.674215425753,584.990043887945,591.843036135701,592.968894733538,568.347920187105,578.171220515569,539.910908766211,589.645943172874,550.424780907969,540.94851266874,552.012292132399,615.371449137731,501.43147836339,455.458669514808,447.937374173194,481.04607099921,546.190719049967,506.160999166431,481.641103693588,552.752422452745,540.187843583998,538.148906191063,489.698183380412,472.999341165242,460.240141823626,610.522791563619,494.589390559682,481.095891922252,550.415753063232,550.645533574923,626.560672466747,579.810351393972,526.112187393724,560.59858001201,576.351744523425,423.756116128589,404.841240993256|short_description=p1@Sfpq}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:71514
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q8VIJ6
|association_with_transcript=0bp_to_ENSMUST00000030623_5end
|cluster_id=chr4:126698555..126698583,+
|description=CAGE_peak_1_at_Sfpq_5end
|id=chr4:126698555..126698583,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!9.65e-09!29;UBERON:0002370!2.62e-07!23;UBERON:0000974!2.62e-07!23;UBERON:0004807!2.62e-07!23;UBERON:0005058!2.62e-07!23;UBERON:0003351!2.62e-07!23;UBERON:0009113!2.62e-07!23;UBERON:0003295!2.62e-07!23;UBERON:0009722!2.62e-07!23;UBERON:0005562!2.62e-07!23;UBERON:0007690!2.62e-07!23;UBERON:0003408!8.85e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000153,7.19e-11,43;UBERON:0004177,9.65e-09,29;UBERON:0005057,9.65e-09,29;UBERON:0007811,3.96e-08,36;UBERON:0002370,2.62e-07,23;UBERON:0000974,2.62e-07,23;UBERON:0004807,2.62e-07,23;UBERON:0005058,2.62e-07,23;UBERON:0003351,2.62e-07,23;UBERON:0009113,2.62e-07,23;UBERON:0003295,2.62e-07,23;UBERON:0009722,2.62e-07,23;UBERON:0005562,2.62e-07,23;UBERON:0007690,2.62e-07,23;UBERON:0000077,7.59e-07,35;UBERON:0003408,8.85e-07,24
|phase1_expression=533.135512011859,273.596719589259,227.499619694768,278.267074402284,355.13507253196,409.121785649275,420.035527790755,575.760899225989,1212.331686448,1178.98301908388,663.469626873832,749.539205920181,747.804788339507,620.859697979719,491.003788916287,498.899058848531,543.55957930557,525.875429652182,497.176936254409,610.696708937365,309.132359699139,477.78805717866,373.776898257817,239.668649344523,230.097508910372,165.953037629241,222.703952014242,276.018649070624,224.79770521689,260.095093912249,299.114458874006,417.850183136437,565.24453979022,602.230387858667,402.948009553028,450.99459285759,444.885027295702,347.79978514237,279.718053339521,346.049194766681,477.055736793153,409.827290975067,320.436833000561,213.395106468604,210.559886142932,243.38299336639,302.785450262691,301.528791274158,162.567775223509,153.794050167758,302.650643554034,307.630487741039,810.222204652809,1177.26275648441,1100.70719219157,280.670044715218,277.077836420778,192.345690419486,718.628068973291,735.297461188126,747.921056137291,226.686991954249,300.581641085565,146.233704058227,225.46153066527,162.699946322657,271.737300240193,255.889391344155,822.258625606228,773.989044455583,834.990096564987,299.933533623994,280.503047008549,814.441323980229,744.048391514569,941.280037488661,377.697471827903,212.727105249923,237.475700414152,721.1542213087,540.051560185024,648.537146343166,162.484505418804,187.399949140549,228.433380426331,564.213741182074,440.355608711625,585.85345822892,262.618438479482,344.833028767262,587.265454109599,210.80384986044,410.022714225774,213.182760696938,218.324876262417,309.138552097162,239.598180744769,272.518085802314,231.729116105759,249.10440002979,484.360520612004,349.048018566945,293.026025662643,334.201350482066,449.218910098269,417.790418168438,445.872560503039,261.709452316085,730.981645535966,374.667958999618,541.794675490642,457.307148424836,427.09990091822,315.010318754981,459.65425619347,237.384191021757,399.961457794217,491.6378135277,534.304773377724,488.535886841176,509.481383088128,546.939285536531,393.286616170238,493.042862167445,331.554136885699,405.154889560826,730.752444361608,428.930452660287,561.523333435873,360.695859686813,438.743078103063,583.538811212142,368.333734487434,266.199791080874,341.811333300476,282.137556474831,538.017359221221,449.855605726096,360.888099043287,476.019478015204,956.385255775872,666.486200752638,868.979838440615,589.406542555482,784.188689218205,803.913594787432,700.139285910294,513.784894287685,1288.88102974546,1203.09288202767,986.030099814769,767.40425922894,764.351888121169,633.470690903821,554.994421892223,694.231522662904,405.177009079736,513.666422600971,457.219070527509,644.782529903017,652.686024927391,494.450420771947,692.95184105791,559.991003553111,482.856063337494,466.928161058819,442.114565506572,458.070438106406,410.741385384047,398.106100391806,421.395672019358,332.166371430355,317.469466710859,254.992195644706,421.631346871075,640.272498223908,207.833414496809,448.243710494708,908.821235530632,751.75010681224,785.189441835515,588.31084132629,546.605231770691,417.164798064842,344.508098681315,331.37429690471,372.9814498596,315.942877601348,371.991478223281,400.873456259783,292.002505380712,277.403793643334,968.823638068341,774.262169956132,1062.83394739715,743.123695307552,654.395691703569,682.982614091922,535.170813682589,365.482726397495,315.724441689005,250.002654105568,293.784553443365,937.335803913016,800.584787096076,737.99745284709,758.696853993001,642.254776420686,492.701023197047,544.033395919483,632.975925329738,322.884221909184,1752.53443756845,347.207504174714,343.865515772246,379.373474676562,276.989606477832,271.615702527576,414.955665114194,793.779523906561,933.95227998925,821.056979894585,821.181178761469,711.566581612833,612.248244358827,584.620408981965,645.831185403065,545.688995294581,561.918604748985,425.389165002056,346.751443586718,280.619173648132,199.044494799839,257.811294130068,378.658490224658,513.242348126802,297.018591477415,209.10564888049,389.509430214981,220.659590376622,601.989682646218,589.172065143627,756.782396235323,686.318387719729,648.566940253849,797.992740293719,618.145941457564,655.529889295073,626.135840267293,627.540530971789,657.040654429075,512.650872958028,583.135314485802,609.234664137573,508.413879842058,738.295914547299,578.344964473569,430.962607242227,430.550159820167,403.662349250377,438.81124179964,457.325431682702,421.379901250741,426.01754969748,315.201639639246,340.347292719017,400.697415972208,836.203720681405,650.027386008341,613.003920190354,638.424841112185,480.882332255182,469.458355777851,405.242847271532,492.575915225728,309.698487602905,403.787496838635,699.117712471875,744.996864774908,617.242473714747,464.477790516204,532.473078772979,371.34658586643,318.189818250035,790.277823690069,624.113888720785,649.847596540318,638.192332331893,741.429491158841,583.613119849839,678.55389253547,683.942747505717,675.245072008415,305.494597764836,935.721869012998,755.331820376243,524.149919008202,520.629857076027,438.035302874832,396.366314024988,380.040589425095,235.580347785627,278.153732684188,394.550463810198,463.355595598404,708.110362064284,518.877826073458,546.602290435118,431.393810415622,525.284594150829,610.022926480629,646.985588289588,648.450185928596,464.083096106758,336.419047309187,1043.78473143487,590.335826924958,633.829316664149,726.907004560763,878.663022335999,887.906974517473,692.325789235021,777.142291992625,815.808915581033,818.613517088008,801.870650393293,1018.62976949189,765.846259457022,800.723656845929,333.293663914361,554.520911528414,540.256844502263,396.207694619225,373.435485264224,413.464493418954,525.828313271318,458.105226091964,276.366229323485,480.603818067124,406.00685859933,460.607992805275,530.167067530276,269.922512789633,303.66834675066,310.510350106631,346.74732648265,299.980274747543,311.173947362844,1164.07889050413,698.692553325205,717.934812196134,765.543052048058,799.674215425753,584.990043887945,591.843036135701,592.968894733538,568.347920187105,578.171220515569,539.910908766211,589.645943172874,550.424780907969,540.94851266874,552.012292132399,615.371449137731,501.43147836339,455.458669514808,447.937374173194,481.04607099921,546.190719049967,506.160999166431,481.641103693588,552.752422452745,540.187843583998,538.148906191063,489.698183380412,472.999341165242,460.240141823626,610.522791563619,494.589390559682,481.095891922252,550.415753063232,550.645533574923,626.560672466747,579.810351393972,526.112187393724,560.59858001201,576.351744523425,423.756116128589,404.841240993256
|short_description=p1@Sfpq
}}

Revision as of 18:35, 4 August 2015

Short description:p1@Sfpq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sfpq_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000030623_5end
EntrezGene:71514
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sfpq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7533.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5273.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6227.50
CD326+ enterocyte, pool1.CNhs13542.11848-124I3278.27
CD326+ enterocyte, pool2.CNhs13197.11849-124I4355.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7409.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8420.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9575.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71212.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21178.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6663.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1749.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4747.80
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8620.86
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1491.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3498.90
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5543.56
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2525.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4497.18
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6610.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3309.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2477.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9373.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1239.67
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2230.10
GP2+ M cell, pool1.CNhs13228.11845-124H9165.95
GP2+ M cell, pool2.CNhs13231.11846-124I1222.70
GP2+ M cell, pool3.CNhs13240.11847-124I2276.02
Ileum epithelium, pool1.CNhs13199.10252-104B9224.80
Ileum epithelium, pool2.CNhs13232.10253-104C1260.10
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8299.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3417.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6565.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9602.23
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5402.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6450.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7444.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8347.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1279.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3346.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9477.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2409.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4320.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8213.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9210.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3243.38
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7302.79
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2301.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8162.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3153.79
Mouse Astrocytes, donor2.CNhs12078.11552-120C4302.65
Mouse Astrocytes, donor3.CNhs12107.11633-122C4307.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2810.22
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91177.26
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11100.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1280.67
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1277.08
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5192.35
Mouse Granule cells, donor1.CNhs12131.11713-123C3718.63
Mouse Granule cells, donor2.CNhs12357.11731-123E3735.30
Mouse Granule cells, donor3.CNhs12108.11636-122C7747.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6226.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1300.58
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7146.23
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7225.46
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2162.70
Mouse Microglia, donor1.CNhs12629.11718-123C8271.74
Mouse Microglia, donor2.CNhs12634.11736-123E8255.89
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5822.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5773.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9834.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1299.93
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5280.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2814.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2744.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6941.28
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3377.70
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3212.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7237.48
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4721.15
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4540.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8648.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4162.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5187.40
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6228.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6564.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6440.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1585.85
Mouse Schwann, donor1.CNhs12507.11728-123D9262.62
Mouse Schwann, donor2.CNhs12573.11746-123F9344.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3587.27
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7210.80
Mouse hepatocyte, donor1.CNhs13078.11714-123C4410.02
Mouse hepatocyte, donor3.CNhs12615.11637-122C8213.18
Mouse hepatocyte, donor6.CNhs13090.11822-124F4218.32
Mouse hepatocyte, donor8.CNhs13091.11824-124F6309.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7239.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7272.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3231.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8249.10
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6484.36
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1349.05
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8293.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6334.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1449.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2417.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3445.87
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6261.71
accessory axillary lymph node, adult.CNhs10475.1063-29H9730.98
adrenal gland, adult.CNhs10508.49-24D7374.67
adrenal gland, embryo E14.CNhs11038.406-44C5541.79
adrenal gland, embryo E16.CNhs11004.1254-43D6457.31
adrenal gland, embryo E17.CNhs11043.1263-45I1427.10
adrenal gland, embryo E18.CNhs11026.1262-18F5315.01
adrenal gland, neonate N00.CNhs11191.1311-23C1459.65
adrenal gland, neonate N25.CNhs11223.1377-27I3237.38
amnion, adult pregnant day17.5.CNhs10488.583-22A8399.96
aorta, adult.CNhs10498.46-23H1491.64
bone (os femoris), adult.CNhs10483.56-12G2534.30
bone (os femoris), neonate N02.CNhs11227.1985-43F5488.54
bone (os femoris), neonate N16.CNhs11225.1525-43A6509.48
bone (os femoris), neonate N20.CNhs11195.1350-25C3546.94
cecum, adult.CNhs10467.37-13H4393.29
cerebellum, adult.CNhs10494.15-8B2493.04
cerebellum, neonate N30.CNhs11135.1395-42I2331.55
colon, adult.CNhs10468.36-18H7405.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7730.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1428.93
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4561.52
corpora quadrigemina, adult.CNhs10501.16-22A4360.70
corpus striatum, adult.CNhs10487.19-21D8438.74
corpus striatum, neonate N00.CNhs11226.630-43F1583.54
cortex, adult.CNhs10473.12-14D5368.33
cortex, neonate N30.CNhs11107.1392-42F2266.20
diencephalon, adult.CNhs10482.20-12F2341.81
diencephalon, neonate N30.CNhs11201.1388-42B2282.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1538.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2449.86
epididymis, adult.CNhs10490.58-23B2360.89
eyeball, adult.CNhs10484.31-12G4476.02
eyeball, embryo E12.CNhs11016.345-16C6956.39
eyeball, embryo E14.CNhs10521.399-16E2666.49
eyeball, embryo E15.CNhs10593.426-16C9868.98
eyeball, embryo E17.CNhs11023.1261-18D4589.41
eyeball, neonate N00.CNhs11207.633-15C6784.19
eyeball, neonate N01.CNhs11140.1532-43E7803.91
eyeball, neonate N02.CNhs11205.1551-44G8700.14
eyeball, neonate N16.CNhs11188.777-19A2513.78
forelimb, embryo E11.CNhs10596.335-25E21288.88
forelimb, embryo E12.CNhs10600.359-14H21203.09
forelimb, embryo E13.CNhs10589.384-1E2986.03
forelimb, embryo E14.CNhs10577.413-26A8767.40
forelimb, embryo E15.CNhs11007.437-20E7764.35
forelimb, embryo E17.CNhs10598.1517-43C4633.47
forelimb, embryo E18.CNhs11008.1520-43B5554.99
gonad, embryo E13.CNhs11044.1564-45I6694.23
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8405.18
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2513.67
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5457.22
heart, embryo E11.CNhs10586.331-24E9644.78
heart, embryo E12.CNhs11015.353-12F5652.69
heart, embryo E13.CNhs11013.376-3I9494.45
heart, embryo E14.CNhs10597.403-26D4692.95
heart, embryo E15.CNhs11017.431-16C8559.99
heart, embryo E16.CNhs11021.457-17C6482.86
heart, embryo E17.CNhs11025.479-18E5466.93
heart, embryo E18.CNhs11030.1283-20G3442.11
heart, neonate N00.CNhs11213.639-21E3458.07
heart, neonate N03.CNhs11221.1349-25I2410.74
heart, neonate N10.CNhs11118.749-24G1398.11
heart, neonate N16.CNhs11209.782-15G1421.40
heart, neonate N20.CNhs11127.821-26I6332.17
heart, neonate N25.CNhs11196.1351-25D3317.47
heart, neonate N30.CNhs11202.1390-42D2254.99
hippocampus, adult.CNhs10478.13-16E8421.63
hippocampus, neonate N00.CNhs11228.627-43G1640.27
intestinal mucosa, adult.CNhs10506.860-29I3207.83
intestine, adult.CNhs10496.178-9A3448.24
intestine, embryo E12.CNhs11019.1251-16I5908.82
intestine, embryo E13.CNhs11010.381-16D5751.75
intestine, embryo E15.CNhs10602.976-16D8785.19
intestine, embryo E16.CNhs10585.463-22H4588.31
intestine, embryo E17.CNhs10582.482-18D3546.61
intestine, embryo E18.CNhs10526.1289-20F7417.16
intestine, neonate N00.CNhs11126.644-26D1344.51
intestine, neonate N01.CNhs11192.1322-23E9331.37
intestine, neonate N06.CNhs11102.688-20B8372.98
intestine, neonate N07.CNhs11095.720-20F2315.94
intestine, neonate N10.CNhs11098.755-23A5371.99
intestine, neonate N20.CNhs11187.827-18D1400.87
intestine, neonate N25.CNhs11121.1352-25E3292.00
intestine, neonate N30.CNhs11131.1384-42G1277.40
kidney, embryo E14.CNhs10606.411-4I9968.82
kidney, embryo E15.CNhs10997.434-16F8774.26
kidney, embryo E16.CNhs10584.464-22A51062.83
kidney, embryo E17.CNhs11028.483-18I2743.12
kidney, embryo E18.CNhs11001.1288-20C7654.40
kidney, neonate N00.CNhs11214.646-21G7682.98
kidney, neonate N10.CNhs11206.758-6D5535.17
kidney, neonate N20.CNhs11113.832-19I1365.48
kidney, neonate N25.CNhs11122.1353-25F3315.72
kidney, neonate N30.CNhs11203.1385-42H1250.00
liver, adult pregnant day01.CNhs10466.508-5B2293.78
liver, embryo E12.CNhs10601.355-15F8937.34
liver, embryo E13.CNhs10524.378-3H6800.58
liver, embryo E14.CNhs10594.409-16E1738.00
liver, embryo E15.CNhs10520.433-16D7758.70
liver, embryo E16.CNhs10523.462-17F5642.25
liver, embryo E17.CNhs10510.481-18A3492.70
liver, embryo E18.CNhs10579.499-43G4544.03
liver, neonate N00.CNhs11117.641-24F4632.98
liver, neonate N03.CNhs11123.1345-25G2322.88
liver, neonate N06.CNhs11101.684-20A81752.53
liver, neonate N07.CNhs11103.716-20H2347.21
liver, neonate N10.CNhs11115.751-24B9343.87
liver, neonate N20.CNhs11220.823-25A3379.37
liver, neonate N25.CNhs11198.1368-26H1276.99
liver, neonate N30.CNhs11106.1382-42D1271.62
lung, adult.CNhs10474.28-22B1414.96
lung, embryo E12.CNhs10522.354-16G2793.78
lung, embryo E14.CNhs10604.404-26F8933.95
lung, embryo E15.CNhs11020.432-17C5821.06
lung, embryo E16.CNhs10998.458-17B6821.18
lung, embryo E17.CNhs10605.480-44A6711.57
lung, embryo E18.CNhs10583.1287-20I6612.25
lung, neonate N00.CNhs11224.640-42C6584.62
lung, neonate N06.CNhs11212.683-20E5645.83
lung, neonate N07.CNhs11111.715-19A3545.69
lung, neonate N10.CNhs11219.750-23E6561.92
lung, neonate N20.CNhs11109.822-18A4425.39
lung, neonate N25.CNhs11119.1359-25C7346.75
lung, neonate N30.CNhs11133.1394-42H2280.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1199.04
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1257.81
mammary gland, adult lactating day02.CNhs10480.595-22B6378.66
mammary gland, adult pregnant day19.CNhs10476.588-5H2513.24
medulla oblongata, adult.CNhs10477.17-12C2297.02
medulla oblongata, neonate N30.CNhs11200.1396-42A3209.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7389.51
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2220.66
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1601.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2589.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3756.78
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7686.32
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8648.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9797.99
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4618.15
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5655.53
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6626.14
olfactory brain, adult.CNhs10489.18-22I9627.54
ovary, adult.CNhs10507.91-2I7657.04
ovary, embryo E18.CNhs11040.505-44H7512.65
ovary, neonate N00.CNhs11217.1299-22I4583.14
oviduct, adult pregnant day01.CNhs10500.988-6G6609.23
pancreas, adult.CNhs10486.34-16E4508.41
pancreas, embryo E14.CNhs11012.405-44F4738.30
pancreas, embryo E15.CNhs11042.1556-45F2578.34
pancreas, embryo E16.CNhs11003.460-26E5430.96
pancreas, embryo E17.CNhs10599.1558-45G3430.55
pancreas, embryo E18.CNhs10580.1535-43I7403.66
pancreas, neonate N00.CNhs11105.645-26G9438.81
pancreas, neonate N01.CNhs11138.1531-43D7457.33
pancreas, neonate N02.CNhs11139.1539-43D8421.38
pancreas, neonate N16.CNhs11136.787-43B6426.02
pancreas, neonate N25.CNhs11094.1555-45E2315.20
pancreas, neonate N30.CNhs11182.1548-44H5340.35
pituitary gland, adult.CNhs10493.21-1G8400.70
pituitary gland, embryo E12.CNhs11018.346-16E6836.20
pituitary gland, embryo E13.CNhs11009.370-44C7650.03
pituitary gland, embryo E14.CNhs11037.398-44A5613.00
pituitary gland, embryo E15.CNhs10592.427-16B9638.42
pituitary gland, embryo E16.CNhs11036.449-43F6480.88
pituitary gland, embryo E17.CNhs11039.1265-44F5469.46
pituitary gland, neonate N00.CNhs11190.1308-22E9405.24
placenta, adult pregnant day10.CNhs10472.539-13I7492.58
placenta, adult pregnant day17.CNhs10464.577-18G3309.70
prostate, adult.CNhs10470.859-1F8403.79
skin, adult.CNhs10492.30-1C3699.12
skin, neonate N00.CNhs11124.650-25G4745.00
skin, neonate N03.CNhs11215.662-22H3617.24
skin, neonate N06.CNhs11097.693-20I5464.48
skin, neonate N10.CNhs11108.762-6C4532.47
small intestine, neonate N16.CNhs11114.790-21I1371.35
spinal cord, adult.CNhs10505.24-13C9318.19
spleen, adult.CNhs10465.25-2G2790.28
spleen, embryo E16.CNhs11035.461-43C1624.11
spleen, embryo E18.CNhs11011.1271-21F2649.85
spleen, neonate N10.CNhs11116.752-24D1638.19
spleen, neonate N20.CNhs11112.824-19H1741.43
spleen, neonate N25.CNhs11099.1354-25G3583.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6678.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9683.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3675.25
stomach, adult.CNhs10503.33-1H6305.49
stomach, embryo E12.CNhs10588.356-43E3935.72
stomach, embryo E15.CNhs10603.1252-16G8755.33
stomach, embryo E16.CNhs11022.459-17D4524.15
stomach, embryo E17.CNhs11006.1035-18D5520.63
stomach, embryo E18.CNhs10999.1286-20C6438.04
stomach, neonate N03.CNhs11193.1340-24B8396.37
stomach, neonate N07.CNhs11210.718-18A9380.04
stomach, neonate N25.CNhs11104.1355-25E4235.58
stomach, neonate N30.CNhs11134.1386-42I1278.15
submandibular gland, adult.CNhs10469.59-29C1394.55
testis, adult.CNhs10504.57-7G5463.36
testis, embryo E13.CNhs11031.389-23F5708.11
testis, embryo E15.CNhs11034.443-27C5518.88
testis, embryo E16.CNhs11033.470-26G5546.60
testis, embryo E17.CNhs11029.486-18I5431.39
testis, embryo E18.CNhs11027.503-18G5525.28
testis, neonate N00.CNhs11189.1300-22B7610.02
testis, neonate N07.CNhs11222.726-26I4646.99
testis, neonate N10.CNhs11204.763-44D9648.45
testis, neonate N20.CNhs11110.839-18H3464.08
testis, neonate N30.CNhs11130.1391-42E2336.42
thymus, adult.CNhs10471.38-12B51043.78
thymus, embryo E14.CNhs11041.402-44I4590.34
thymus, embryo E15.CNhs11005.430-45I2633.83
thymus, embryo E16.CNhs11002.456-26C5726.91
thymus, embryo E17.CNhs10581.478-18C1878.66
thymus, embryo E18.CNhs10595.1273-19G4887.91
thymus, neonate N02.CNhs11181.1541-43F8692.33
thymus, neonate N03.CNhs11137.2104-43C7777.14
thymus, neonate N06.CNhs11197.681-26C4815.81
thymus, neonate N07.CNhs11211.713-19D3818.61
thymus, neonate N10.CNhs11194.748-24E4801.87
thymus, neonate N20.CNhs11186.820-7A21018.63
thymus, neonate N25.CNhs11125.1362-25G7765.85
thymus, neonate N30.CNhs11132.1393-42G2800.72
tongue, adult.CNhs10499.32-1B4333.29
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3554.52
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7540.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5396.21
urinary bladder, adult.CNhs10481.879-12E4373.44
uterus, adult pregnant day19.CNhs10497.590-15F5413.46
uterus, adult.CNhs10509.92-27E5525.83
vagina, adult.CNhs10502.89-27D5458.11
vesicular gland, adult.CNhs10491.51-27F8276.37
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1480.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2406.01
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3460.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7530.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4269.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5303.67
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6310.51
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7346.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8299.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9311.17
whole body, embryo E11.CNhs11014.324-5I81164.08
whole body, embryo E12.CNhs10587.857-27C9698.69
whole body, embryo E13.CNhs10512.372-23H2717.93
whole body, embryo E14.5.CNhs10578.420-27D2765.54
whole body, embryo E14.CNhs10519.395-14B1799.67
whole body, embryo E16.CNhs10514.453-14F2584.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5591.84
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5592.97
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5568.35
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5578.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5539.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5589.65
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5550.42
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5540.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5552.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5615.37
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5501.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5455.46
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5447.94
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5481.05
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5546.19
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5506.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5481.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5552.75
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5540.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5538.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5489.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5473.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5460.24
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5610.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5494.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5481.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5550.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5550.65
whole body, embryo E17.5.CNhs10513.490-9F9626.56
whole body, embryo E17.CNhs10517.475-3I5579.81
whole body, embryo E18.CNhs10516.493-3B3526.11
whole body, neonate N00.CNhs10525.657-19C2560.60
whole body, neonate N01.CNhs10576.659-23C6576.35
whole body, neonate N06.CNhs10515.692-21D1423.76
whole body, neonate N10.CNhs10518.761-6B4404.84





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:126698555..126698583,%2B&oldid=3809272"