FFCP PHASE1:Mm9::chr7:20284394..20284412,-: Difference between revisions
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{{FFCP|EntrezGene=11816|HGNC=|MCL_coexpression_id=200|UniProt=P08226,E9Q327,G3UWW2|association_with_transcript=0bp_to_ENSMUST00000003066,ENSMUST00000167646,ENSMUST00000174710_5end|description=CAGE_peak_1_at_Apoe_5end|id=chr7:20284394..20284412,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.33e-13!25;UBERON:0002330!2.33e-13!25;UBERON:0002107!4.73e-13!22;UBERON:0007499!4.73e-13!22;UBERON:0006925!4.73e-13!22;UBERON:0009497!4.73e-13!22;UBERON:0000015!4.73e-13!22;UBERON:0002423!4.73e-13!22;UBERON:0006235!4.73e-13!22;UBERON:0008835!4.73e-13!22;UBERON:0003894!4.73e-13!22;UBERON:0004161!4.73e-13!22;UBERON:0008836!4.73e-13!22;UBERON:0009854!2.62e-12!23;UBERON:0009856!2.62e-12!23;UBERON:0004111!9.50e-12!122;UBERON:0000025!1.11e-11!114;UBERON:0004121!1.88e-10!102;UBERON:0000924!1.88e-10!102;UBERON:0006601!1.88e-10!102;UBERON:0001017!4.00e-09!73;UBERON:0005743!4.00e-09!73;UBERON:0000073!2.45e-08!75;UBERON:0001016!2.45e-08!75;UBERON:0000468!4.35e-08!333;UBERON:0005172!4.75e-08!49;UBERON:0005173!4.75e-08!49;UBERON:0002417!4.75e-08!49;UBERON:0000916!4.75e-08!49;UBERON:0000479!1.02e-07!349;UBERON:0005256!2.66e-07!47;UBERON:0003914!4.10e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.31e-13,25;UBERON:0002330,2.31e-13,25;UBERON:0002107,4.70e-13,22;UBERON:0007499,4.70e-13,22;UBERON:0006925,4.70e-13,22;UBERON:0009497,4.70e-13,22;UBERON:0000015,4.70e-13,22;UBERON:0002423,4.70e-13,22;UBERON:0006235,4.70e-13,22;UBERON:0008835,4.70e-13,22;UBERON:0003894,4.70e-13,22;UBERON:0004161,4.70e-13,22;UBERON:0008836,4.70e-13,22;UBERON:0009854,2.60e-12,23;UBERON:0009856,2.60e-12,23;UBERON:0004111,9.45e-12,122;UBERON:0000025,1.10e-11,114;UBERON:0004121,1.28e-09,95;UBERON:0000924,1.28e-09,95;UBERON:0006601,1.28e-09,95;UBERON:0001017,3.99e-09,73;UBERON:0001016,2.44e-08,75;UBERON:0005172,4.73e-08,49;UBERON:0005173,4.73e-08,49;UBERON:0002417,4.73e-08,49;UBERON:0000916,4.73e-08,49;UBERON:0000479,9.67e-08,349;UBERON:0005256,2.10e-07,45;UBERON:0003914,4.09e-07,47;UBERON:0010371,9.93e-07,73|phase1_expression=479.966094773067,9.77131141390211,5.0049916332849,0.60492842261366,0,0.671517087647559,2.10251376535973,3.61545305636414,0.985521055061667,0.70219357896598,0.34243593645101,0.0797721589953364,0.856003649656029,0.437102012094987,423.049397505892,280.023294800129,739.436905181451,168.29906521862,204.711849373368,263.970363418375,836.060585475167,0.198581902401771,0,371.822390571877,402.842697553951,7.46501553349526,3.87685796543167,3.878482188346,36.2944731161674,44.8613630972677,84.2575940490158,3.17515336729816,5.53558308826113,31.6963362030877,0.577703239502549,1.99481574430191,0.612508068787107,41.8531630736908,57.0374801502374,38.2172333100873,35.2938892818609,66.9384575259277,58.7467527167696,62.3189248979108,80.4932833882946,18.7217687204915,4397.03935523598,2725.53247991196,2195.98308261378,3619.70143106593,1361.36795030665,1470.58873345366,277.009082601323,8.70434570413613,8.73843877770406,202.205916724254,457.020836702317,1538.24985126361,100.146648125501,95.2183762689659,179.374287192249,720.044630646906,625.174241666131,56276.5786697682,63898.5666163528,65710.17439102,24459.6526228331,29676.6376847316,66.3613518774257,77.8984264173855,86.2332341540666,5138.00425647121,5420.5557320345,75.3318415171967,63.5455472850907,73.5375029288017,2909.26157600385,2309.48088394679,2697.7915435794,78.208568624005,105.302277786374,150.543964090904,3235.451775427,4386.17178258691,3861.8229143111,2185.26021845819,2284.9231051448,303.83109669524,73.3029551465222,168.449007478025,3411.41516753005,33524.6955188258,43295.1347598399,50752.608735237,76839.3102452741,65498.3947054208,9105.43309040187,0,0,0.35333957451034,553.092109463024,0,0,0,0.432982082022428,0,1.01104889002957,14861.3744970748,1962.23128227827,1999.96093962038,401.965502117137,636.637315150687,760.569909950481,844.800400297449,700.946283235936,842.845828048133,3467.40381241006,1862.58431648538,411.343906656692,249.606249468852,340.537621465927,308.380660994001,279.587641827183,1415.88793434784,1244.74177859236,498.141257656753,129.759779839912,123.579962584642,96.9545832567484,2476.03926936172,2483.77077270232,502.743062803571,2050.77932962848,2079.98952992491,2842.54044957478,2449.19410727087,511.640963983989,889.261025920945,1591.64793261528,1010.12090825508,246.057757642473,245.075643326082,238.942446251698,405.697369613745,275.956040557786,310.675771690761,390.736191414069,1113.9767144022,29.3172470388665,70.9147800629322,69.1487917964319,177.548543266336,159.321073806268,144.872901273221,200.637582997745,203.811089222137,48.4527099246132,51.7269293300578,42.3403614099433,184.756189101668,285.418214996994,285.218305354248,253.790356547345,396.086398507524,429.325375165574,318.106436418558,315.757793447352,337.101543414018,429.501208274184,413.70200947932,671.736155896961,833.924728274096,705.634070545437,941.994853279049,2299.7308774973,487.45914884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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11816 | |||
|HGNC= | |||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P08226,uniprot:E9Q327,uniprot:G3UWW2 | |||
|association_with_transcript=0bp_to_ENSMUST00000003066,ENSMUST00000167646,ENSMUST00000174710_5end | |||
|cluster_id=chr7:20284394..20284412,- | |||
|description=CAGE_peak_1_at_Apoe_5end | |||
|id=chr7:20284394..20284412,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!2.33e-13!25;UBERON:0002330!2.33e-13!25;UBERON:0002107!4.73e-13!22;UBERON:0007499!4.73e-13!22;UBERON:0006925!4.73e-13!22;UBERON:0009497!4.73e-13!22;UBERON:0000015!4.73e-13!22;UBERON:0002423!4.73e-13!22;UBERON:0006235!4.73e-13!22;UBERON:0008835!4.73e-13!22;UBERON:0003894!4.73e-13!22;UBERON:0004161!4.73e-13!22;UBERON:0008836!4.73e-13!22;UBERON:0009854!2.62e-12!23;UBERON:0009856!2.62e-12!23;UBERON:0004111!9.50e-12!122;UBERON:0000025!1.11e-11!114;UBERON:0004121!1.88e-10!102;UBERON:0000924!1.88e-10!102;UBERON:0006601!1.88e-10!102;UBERON:0001017!4.00e-09!73;UBERON:0005743!4.00e-09!73;UBERON:0000073!2.45e-08!75;UBERON:0001016!2.45e-08!75;UBERON:0000468!4.35e-08!333;UBERON:0005172!4.75e-08!49;UBERON:0005173!4.75e-08!49;UBERON:0002417!4.75e-08!49;UBERON:0000916!4.75e-08!49;UBERON:0000479!1.02e-07!349;UBERON:0005256!2.66e-07!47;UBERON:0003914!4.10e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.31e-13,25;UBERON:0002330,2.31e-13,25;UBERON:0002107,4.70e-13,22;UBERON:0007499,4.70e-13,22;UBERON:0006925,4.70e-13,22;UBERON:0009497,4.70e-13,22;UBERON:0000015,4.70e-13,22;UBERON:0002423,4.70e-13,22;UBERON:0006235,4.70e-13,22;UBERON:0008835,4.70e-13,22;UBERON:0003894,4.70e-13,22;UBERON:0004161,4.70e-13,22;UBERON:0008836,4.70e-13,22;UBERON:0009854,2.60e-12,23;UBERON:0009856,2.60e-12,23;UBERON:0004111,9.45e-12,122;UBERON:0000025,1.10e-11,114;UBERON:0004121,1.28e-09,95;UBERON:0000924,1.28e-09,95;UBERON:0006601,1.28e-09,95;UBERON:0001017,3.99e-09,73;UBERON:0001016,2.44e-08,75;UBERON:0005172,4.73e-08,49;UBERON:0005173,4.73e-08,49;UBERON:0002417,4.73e-08,49;UBERON:0000916,4.73e-08,49;UBERON:0000479,9.67e-08,349;UBERON:0005256,2.10e-07,45;UBERON:0003914,4.09e-07,47;UBERON:0010371,9.93e-07,73 | |||
|phase1_expression=479.966094773067,9.77131141390211,5.0049916332849,0.60492842261366,0,0.671517087647559,2.10251376535973,3.61545305636414,0.985521055061667,0.70219357896598,0.34243593645101,0.0797721589953364,0.856003649656029,0.437102012094987,423.049397505892,280.023294800129,739.436905181451,168.29906521862,204.711849373368,263.970363418375,836.060585475167,0.198581902401771,0,371.822390571877,402.842697553951,7.46501553349526,3.87685796543167,3.878482188346,36.2944731161674,44.8613630972677,84.2575940490158,3.17515336729816,5.53558308826113,31.6963362030877,0.577703239502549,1.99481574430191,0.612508068787107,41.8531630736908,57.0374801502374,38.2172333100873,35.2938892818609,66.9384575259277,58.7467527167696,62.3189248979108,80.4932833882946,18.7217687204915,4397.03935523598,2725.53247991196,2195.98308261378,3619.70143106593,1361.36795030665,1470.58873345366,277.009082601323,8.70434570413613,8.73843877770406,202.205916724254,457.020836702317,1538.24985126361,100.146648125501,95.2183762689659,179.374287192249,720.044630646906,625.174241666131,56276.5786697682,63898.5666163528,65710.17439102,24459.6526228331,29676.6376847316,66.3613518774257,77.8984264173855,86.2332341540666,5138.00425647121,5420.5557320345,75.3318415171967,63.5455472850907,73.5375029288017,2909.26157600385,2309.48088394679,2697.7915435794,78.208568624005,105.302277786374,150.543964090904,3235.451775427,4386.17178258691,3861.8229143111,2185.26021845819,2284.9231051448,303.83109669524,73.3029551465222,168.449007478025,3411.41516753005,33524.6955188258,43295.1347598399,50752.608735237,76839.3102452741,65498.3947054208,9105.43309040187,0,0,0.35333957451034,553.092109463024,0,0,0,0.432982082022428,0,1.01104889002957,14861.3744970748,1962.23128227827,1999.96093962038,401.965502117137,636.637315150687,760.569909950481,844.800400297449,700.946283235936,842.845828048133,3467.40381241006,1862.58431648538,411.343906656692,249.606249468852,340.537621465927,308.380660994001,279.587641827183,1415.88793434784,1244.74177859236,498.141257656753,129.759779839912,123.579962584642,96.9545832567484,2476.03926936172,2483.77077270232,502.743062803571,2050.77932962848,2079.98952992491,2842.54044957478,2449.19410727087,511.640963983989,889.261025920945,1591.64793261528,1010.12090825508,246.057757642473,245.075643326082,238.942446251698,405.697369613745,275.956040557786,310.675771690761,390.736191414069,1113.9767144022,29.3172470388665,70.9147800629322,69.1487917964319,177.548543266336,159.321073806268,144.872901273221,200.637582997745,203.811089222137,48.4527099246132,51.7269293300578,42.3403614099433,184.756189101668,285.418214996994,285.218305354248,253.790356547345,396.086398507524,429.325375165574,318.106436418558,315.757793447352,337.101543414018,429.501208274184,413.70200947932,671.736155896961,833.924728274096,705.634070545437,941.994853279049,2299.7308774973,487.45914884067,88.2218150566741,148.885669031575,99.6056129999543,140.967659819286,132.862352623078,116.774760756915,165.671642664428,329.661010053065,380.572307358698,431.840659286357,596.92112090064,515.695175530663,519.384328085336,342.450194697258,327.233007510287,490.086673478998,84.5918838250744,145.209859526965,92.420343251926,125.856520608404,174.751190938031,224.64503110869,534.348738699974,1007.73448025674,334.093292846446,458.914052625176,43727.6518532357,735.786916207975,976.308528727279,1219.42723546306,2288.87074962648,3691.21643001074,6960.70691014867,9386.37418047015,13636.8696535947,23928.3017207545,13299.9967858456,31300.0308265025,39360.1200489976,41148.6353218758,31423.7891447387,45348.2436775924,569.039825713142,194.228697064747,164.10573127712,201.147926643598,227.884231088136,229.316066437846,649.383052337045,877.516014416521,300.137314378188,247.818987716979,383.967082927229,625.630135584688,491.979513335937,783.274652218885,6577.51580543106,1780.20330313864,853.702777961047,977.643892157667,2213.67153475168,2445.03578231336,0,506.456679971972,576.118008654085,551.299506946854,667.381686176211,1662.98386495181,1653.83455771361,1666.47153675386,1336.28012622883,1587.53382017425,1673.25316404763,2911.49244809799,936.378742118948,822.841154546386,332.940944918709,1377.00561645175,455.315824506073,240.110049157277,206.78931296389,210.860479167094,323.355572704446,417.804366055797,449.923658405873,660.540786460627,655.955176227887,662.097007875534,475.437924673244,771.453863496438,338.396968119265,156.833212901271,306.580080565128,310.574363760777,291.902024575182,409.713174031956,514.38023840223,628.720119921648,277.616630639369,335.118336106564,308.960285675002,4084.72714411929,570.130890663242,930.869683341157,1717.17116848512,3272.80540001678,495.517422270746,2581.12020398629,1010.18864727691,541.559141535496,396.686677625922,357.711699851908,392.859210470226,490.729181527991,48.7838094082365,53.8813091446083,40.0779924032829,623.399913563869,88.2577422091368,166.518643576889,165.896203502287,160.161634747083,356.804429161254,783.561852495808,3065.53401939698,432.6825720996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| |||
|short_description=p1@Apoe | |||
}} |
Revision as of 18:31, 4 August 2015
Short description: | p1@Apoe |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Apoe_5end |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | 0bp_to_ENSMUST00000003066, ENSMUST00000167646, ENSMUST00000174710_5end |
EntrezGene: | 11816 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.31e-13 | 25 |
exocrine system | 2.31e-13 | 25 |
liver | 4.70e-13 | 22 |
epithelial sac | 4.70e-13 | 22 |
digestive gland | 4.70e-13 | 22 |
epithelium of foregut-midgut junction | 4.70e-13 | 22 |
anatomical boundary | 4.70e-13 | 22 |
hepatobiliary system | 4.70e-13 | 22 |
foregut-midgut junction | 4.70e-13 | 22 |
hepatic diverticulum | 4.70e-13 | 22 |
liver primordium | 4.70e-13 | 22 |
septum transversum | 4.70e-13 | 22 |
liver bud | 4.70e-13 | 22 |
digestive tract diverticulum | 2.60e-12 | 23 |
sac | 2.60e-12 | 23 |
anatomical conduit | 9.45e-12 | 122 |
tube | 1.10e-11 | 114 |
ectoderm-derived structure | 1.28e-09 | 95 |
ectoderm | 1.28e-09 | 95 |
presumptive ectoderm | 1.28e-09 | 95 |
central nervous system | 3.99e-09 | 73 |
nervous system | 2.44e-08 | 75 |
abdomen element | 4.73e-08 | 49 |
abdominal segment element | 4.73e-08 | 49 |
abdominal segment of trunk | 4.73e-08 | 49 |
abdomen | 4.73e-08 | 49 |
tissue | 9.67e-08 | 349 |
trunk mesenchyme | 2.10e-07 | 45 |
epithelial tube | 4.09e-07 | 47 |
ecto-epithelium | 9.93e-07 | 73 |