FFCP PHASE1:Mm9::chr4:125933900..125933906,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3249 | |MCL_coexpression_id=3249 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:125933900..125933906,+ | |||
|description=CAGE_peak_at_chr4:125933900..125933906,+ | |description=CAGE_peak_at_chr4:125933900..125933906,+ | ||
|id=chr4:125933900..125933906,+ | |id=chr4:125933900..125933906,+ | ||
|ontology_enrichment_celltype=CL:0000144!3.07e-07!121;CL:0000012!3.07e-07!121 | |ontology_enrichment_celltype=CL:0000144!3.07e-07!121;CL:0000012!3.07e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,4.85e-14,1;CL:0002078,4.85e-14,1;CL:0000115,4.85e-14,1;CL:0002262,4.85e-14,1;CL:1000398,4.85e-14,1;CL:0000049,4.64e-11,19;CL:0002320,3.85e-07,46;CL:0000134,3.85e-07,46;CL:0000988,9.80e-07,32;CL:0002032,9.80e-07,32;CL:0000037,9.80e-07,32;CL:0000837,9.80e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.85e-14,1;UBERON:0001281,4.85e-14,1;UBERON:0000353,4.85e-14,1;UBERON:0003497,4.85e-14,1;UBERON:0003909,4.85e-14,1;UBERON:0003928,4.85e-14,1;UBERON:0003835,4.85e-14,1;UBERON:0003513,4.85e-14,1;UBERON:0001280,4.85e-14,1;UBERON:0004647,4.85e-14,1;UBERON:0002294,4.85e-14,1;UBERON:0001173,4.85e-14,1;UBERON:0004912,4.85e-14,1;UBERON:0005171,4.85e-14,1;UBERON:0002384,3.85e-07,46 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.387369970324729,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0.297872853602656,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,1.5626706890476,0,0,0,0.971020706062307,0.377690453926732,0.506884656097573,0.183546752161682,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0.46081959976873,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,3.47837386442013,0,0,0,0,0,0,0,0.519572009205738,0.35333957451034,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,1.31796636956512,4.19931911695385,2.1601938602421,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,3.08817488537658,0.852490498186778,0,0,0.36012412292203,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0.292399974850665,0.658650345873152,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0.160550589987792,0.35163505977661,0.163934945376675,0.757412781613119,0.315508219416257,0,0.215423397732799,0.716906393857656,0,0.283076530788832,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,1.25956307091292,0.552799895217695,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.387369970324729,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0.297872853602656,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,1.5626706890476,0,0,0,0.971020706062307,0.377690453926732,0.506884656097573,0.183546752161682,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0.46081959976873,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,3.47837386442013,0,0,0,0,0,0,0,0.519572009205738,0.35333957451034,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,1.31796636956512,4.19931911695385,2.1601938602421,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,3.08817488537658,0.852490498186778,0,0,0.36012412292203,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0.292399974850665,0.658650345873152,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0.160550589987792,0.35163505977661,0.163934945376675,0.757412781613119,0.315508219416257,0,0.215423397732799,0.716906393857656,0,0.283076530788832,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,1.25956307091292,0.552799895217695,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr4:125933900..125933906,+ | |short_description=p@chr4:125933900..125933906,+ | ||
}} | }} |
Latest revision as of 18:10, 4 August 2015
Short description: | p@chr4:125933900..125933906, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:125933900..125933906, + |
Coexpression cluster: | MCL_coexpression_mm9:3249 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 4.85e-14 | 1 |
meso-epithelial cell | 4.85e-14 | 1 |
endothelial cell | 4.85e-14 | 1 |
endothelial cell of sinusoid | 4.85e-14 | 1 |
endothelial cell of hepatic sinusoid | 4.85e-14 | 1 |
common myeloid progenitor | 4.64e-11 | 19 |
connective tissue cell | 3.85e-07 | 46 |
mesenchymal cell | 3.85e-07 | 46 |
hematopoietic cell | 9.80e-07 | 32 |
hematopoietic oligopotent progenitor cell | 9.80e-07 | 32 |
hematopoietic stem cell | 9.80e-07 | 32 |
hematopoietic multipotent progenitor cell | 9.80e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.85e-14 | 1 |
hepatic sinusoid | 4.85e-14 | 1 |
parenchyma | 4.85e-14 | 1 |
abdomen blood vessel | 4.85e-14 | 1 |
sinusoid | 4.85e-14 | 1 |
digestive system duct | 4.85e-14 | 1 |
abdominal segment blood vessel | 4.85e-14 | 1 |
trunk blood vessel | 4.85e-14 | 1 |
liver parenchyma | 4.85e-14 | 1 |
liver lobule | 4.85e-14 | 1 |
biliary system | 4.85e-14 | 1 |
biliary tree | 4.85e-14 | 1 |
biliary bud | 4.85e-14 | 1 |
hepatic duct | 4.85e-14 | 1 |
connective tissue | 3.85e-07 | 46 |