FFCP PHASE1:Mm9::chr2:180890124..180890148,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:180890124..180890148,-|id=chr2:180890124..180890148,-|ontology_enrichment_celltype=CL:0000117!3.99e-07!23;CL:0000337!3.99e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.63e-21!52;UBERON:0005068!3.63e-21!52;UBERON:0006241!3.63e-21!52;UBERON:0007135!3.63e-21!52;UBERON:0000955!2.02e-18!50;UBERON:0006238!2.02e-18!50;UBERON:0001017!6.09e-18!73;UBERON:0005743!6.09e-18!73;UBERON:0002020!9.11e-18!34;UBERON:0002616!9.58e-18!49;UBERON:0000073!4.25e-17!75;UBERON:0001016!4.25e-17!75;UBERON:0002346!6.96e-15!71;UBERON:0003075!6.96e-15!71;UBERON:0007284!6.96e-15!71;UBERON:0000033!1.91e-14!63;UBERON:0002791!5.54e-14!29;UBERON:0003528!5.54e-14!29;UBERON:0001893!5.54e-14!29;UBERON:0004121!2.34e-13!102;UBERON:0000924!2.34e-13!102;UBERON:0006601!2.34e-13!102;UBERON:0003080!5.08e-13!40;UBERON:0002780!3.00e-12!39;UBERON:0001890!3.00e-12!39;UBERON:0006240!3.00e-12!39;UBERON:0000025!7.50e-12!114;UBERON:0002021!1.25e-11!10;UBERON:0000411!1.25e-11!10;UBERON:0001950!1.25e-11!10;UBERON:0004111!1.28e-11!122;UBERON:0002619!1.76e-10!17;UBERON:0003056!5.61e-10!49;UBERON:0003076!1.63e-09!12;UBERON:0003057!1.63e-09!12;UBERON:0000956!3.49e-09!21;UBERON:0001869!3.49e-09!21;UBERON:0000203!3.49e-09!21;UBERON:0007811!1.02e-07!86;UBERON:0002298!4.00e-07!6;UBERON:0005418!7.60e-07!5;UBERON:0002472!7.60e-07!5;UBERON:0008784!7.60e-07!5;UBERON:0006058!7.60e-07!5;UBERON:0004709!7.60e-07!5;UBERON:0005420!7.60e-07!5;UBERON:0006057!7.60e-07!5;UBERON:0000978!7.60e-07!5;UBERON:0002103!7.60e-07!5;UBERON:0000376!7.60e-07!5;UBERON:0000154!7.60e-07!5;UBERON:0005730!7.60e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.20e-13,10;UBERON:0000411,3.20e-13,10;UBERON:0001950,3.20e-13,10;UBERON:0000956,1.35e-08,21;UBERON:0001869,1.35e-08,21;UBERON:0000203,1.35e-08,21;UBERON:0000073,2.07e-08,54;UBERON:0003528,3.04e-08,29;UBERON:0002791,3.04e-08,29;UBERON:0001893,3.04e-08,29;UBERON:0002616,3.46e-08,46;UBERON:0000955,5.47e-08,47;UBERON:0006238,5.47e-08,47;UBERON:0002619,1.01e-07,17;UBERON:0002780,1.04e-07,39;UBERON:0001890,1.04e-07,39;UBERON:0006240,1.04e-07,39;UBERON:0003080,1.71e-07,40;UBERON:0001049,4.18e-07,52;UBERON:0005068,4.18e-07,52;UBERON:0006241,4.18e-07,52;UBERON:0007135,4.18e-07,52;UBERON:0002020,6.31e-07,34;UBERON:0001374,6.50e-07,1;UBERON:0004252,6.50e-07,1;UBERON:0003663,6.50e-07,1;UBERON:0005090,6.50e-07,1;UBERON:0001630,6.50e-07,1;UBERON:0003661,6.50e-07,1;UBERON:0010890,6.50e-07,1;UBERON:0001383,6.50e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,1.14918604276669,0.921639199537461,0.131886287730194,0.548925861614458,0,0.837548997004143,1.68828783009504,0.763991238884051,0.589257170947335,0.996601765593721,0.186399445825301,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0.884610551949874,0.808834249737046,1.32504911076236,0.969750506270444,0,0.585561594023094,12.7762491156208,0,0,0,0,0.748953197024114,0.915001205637253,0.376963056338593,1.04294592115366,0.255715457330331,1.24672826735736,0.486723789203273,0,0.248813941220186,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0.350296027101508,0.16455984991348,0.164167464079095,0.729619285912702,1.16959989940266,0.439100230582101,1.47627060636409,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.35163505977661,0,4.79694761688309,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.913394847343798,0,0,0.220528398054962,0,0.161464426695906,0,0,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.68741272937475,2.05524755931193,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,3.10656187051092,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.644613162144895,0.191288332068843,0.882365676478062,1.15933917810211|short_description=p@chr2:180890124..180890148,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:180890124..180890148,- | |||
|description=CAGE_peak_at_chr2:180890124..180890148,- | |||
|id=chr2:180890124..180890148,- | |||
|ontology_enrichment_celltype=CL:0000117!3.99e-07!23;CL:0000337!3.99e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.63e-21!52;UBERON:0005068!3.63e-21!52;UBERON:0006241!3.63e-21!52;UBERON:0007135!3.63e-21!52;UBERON:0000955!2.02e-18!50;UBERON:0006238!2.02e-18!50;UBERON:0001017!6.09e-18!73;UBERON:0005743!6.09e-18!73;UBERON:0002020!9.11e-18!34;UBERON:0002616!9.58e-18!49;UBERON:0000073!4.25e-17!75;UBERON:0001016!4.25e-17!75;UBERON:0002346!6.96e-15!71;UBERON:0003075!6.96e-15!71;UBERON:0007284!6.96e-15!71;UBERON:0000033!1.91e-14!63;UBERON:0002791!5.54e-14!29;UBERON:0003528!5.54e-14!29;UBERON:0001893!5.54e-14!29;UBERON:0004121!2.34e-13!102;UBERON:0000924!2.34e-13!102;UBERON:0006601!2.34e-13!102;UBERON:0003080!5.08e-13!40;UBERON:0002780!3.00e-12!39;UBERON:0001890!3.00e-12!39;UBERON:0006240!3.00e-12!39;UBERON:0000025!7.50e-12!114;UBERON:0002021!1.25e-11!10;UBERON:0000411!1.25e-11!10;UBERON:0001950!1.25e-11!10;UBERON:0004111!1.28e-11!122;UBERON:0002619!1.76e-10!17;UBERON:0003056!5.61e-10!49;UBERON:0003076!1.63e-09!12;UBERON:0003057!1.63e-09!12;UBERON:0000956!3.49e-09!21;UBERON:0001869!3.49e-09!21;UBERON:0000203!3.49e-09!21;UBERON:0007811!1.02e-07!86;UBERON:0002298!4.00e-07!6;UBERON:0005418!7.60e-07!5;UBERON:0002472!7.60e-07!5;UBERON:0008784!7.60e-07!5;UBERON:0006058!7.60e-07!5;UBERON:0004709!7.60e-07!5;UBERON:0005420!7.60e-07!5;UBERON:0006057!7.60e-07!5;UBERON:0000978!7.60e-07!5;UBERON:0002103!7.60e-07!5;UBERON:0000376!7.60e-07!5;UBERON:0000154!7.60e-07!5;UBERON:0005730!7.60e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.20e-13,10;UBERON:0000411,3.20e-13,10;UBERON:0001950,3.20e-13,10;UBERON:0000956,1.35e-08,21;UBERON:0001869,1.35e-08,21;UBERON:0000203,1.35e-08,21;UBERON:0000073,2.07e-08,54;UBERON:0003528,3.04e-08,29;UBERON:0002791,3.04e-08,29;UBERON:0001893,3.04e-08,29;UBERON:0002616,3.46e-08,46;UBERON:0000955,5.47e-08,47;UBERON:0006238,5.47e-08,47;UBERON:0002619,1.01e-07,17;UBERON:0002780,1.04e-07,39;UBERON:0001890,1.04e-07,39;UBERON:0006240,1.04e-07,39;UBERON:0003080,1.71e-07,40;UBERON:0001049,4.18e-07,52;UBERON:0005068,4.18e-07,52;UBERON:0006241,4.18e-07,52;UBERON:0007135,4.18e-07,52;UBERON:0002020,6.31e-07,34;UBERON:0001374,6.50e-07,1;UBERON:0004252,6.50e-07,1;UBERON:0003663,6.50e-07,1;UBERON:0005090,6.50e-07,1;UBERON:0001630,6.50e-07,1;UBERON:0003661,6.50e-07,1;UBERON:0010890,6.50e-07,1;UBERON:0001383,6.50e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,1.14918604276669,0.921639199537461,0.131886287730194,0.548925861614458,0,0.837548997004143,1.68828783009504,0.763991238884051,0.589257170947335,0.996601765593721,0.186399445825301,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0.884610551949874,0.808834249737046,1.32504911076236,0.969750506270444,0,0.585561594023094,12.7762491156208,0,0,0,0,0.748953197024114,0.915001205637253,0.376963056338593,1.04294592115366,0.255715457330331,1.24672826735736,0.486723789203273,0,0.248813941220186,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0.350296027101508,0.16455984991348,0.164167464079095,0.729619285912702,1.16959989940266,0.439100230582101,1.47627060636409,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.35163505977661,0,4.79694761688309,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.913394847343798,0,0,0.220528398054962,0,0.161464426695906,0,0,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.68741272937475,2.05524755931193,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,3.10656187051092,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.644613162144895,0.191288332068843,0.882365676478062,1.15933917810211 | |||
|short_description=p@chr2:180890124..180890148,- | |||
}} |
Latest revision as of 17:58, 4 August 2015
Short description: | p@chr2:180890124..180890148, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:180890124..180890148, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.20e-13 | 10 |
visual cortex | 3.20e-13 | 10 |
neocortex | 3.20e-13 | 10 |
cerebral cortex | 1.35e-08 | 21 |
cerebral hemisphere | 1.35e-08 | 21 |
pallium | 1.35e-08 | 21 |
regional part of nervous system | 2.07e-08 | 54 |
brain grey matter | 3.04e-08 | 29 |
regional part of telencephalon | 3.04e-08 | 29 |
telencephalon | 3.04e-08 | 29 |
regional part of brain | 3.46e-08 | 46 |
brain | 5.47e-08 | 47 |
future brain | 5.47e-08 | 47 |
regional part of cerebral cortex | 1.01e-07 | 17 |
regional part of forebrain | 1.04e-07 | 39 |
forebrain | 1.04e-07 | 39 |
future forebrain | 1.04e-07 | 39 |
anterior neural tube | 1.71e-07 | 40 |
neural tube | 4.18e-07 | 52 |
neural rod | 4.18e-07 | 52 |
future spinal cord | 4.18e-07 | 52 |
neural keel | 4.18e-07 | 52 |
gray matter | 6.31e-07 | 34 |
biceps femoris | 6.50e-07 | 1 |
hindlimb stylopod muscle | 6.50e-07 | 1 |
hindlimb muscle | 6.50e-07 | 1 |
muscle structure | 6.50e-07 | 1 |
muscle organ | 6.50e-07 | 1 |
limb muscle | 6.50e-07 | 1 |
pelvic complex muscle | 6.50e-07 | 1 |
muscle of leg | 6.50e-07 | 1 |