FFCP PHASE1:Mm9::chr14:70205272..70205311,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=246710|HGNC=|MCL_coexpression_id=2|UniProt=Q91V93|association_with_transcript=25bp_to_ENSMUST00000022665_5end|description=CAGE_peak_3_at_Rhobtb2_5end|id=chr14:70205272..70205311,-|ontology_enrichment_celltype=CL:0000117!2.11e-12!23;CL:0000337!2.11e-12!23;CL:0000221!1.40e-11!44;CL:0000133!1.40e-11!44;CL:0002319!2.09e-11!43;CL:0000540!7.64e-10!33;CL:0000047!7.64e-10!33;CL:0000031!7.64e-10!33;CL:0000404!7.64e-10!33;CL:0000055!1.92e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.51e-17,23;CL:0000337,9.51e-17,23;CL:0000221,4.62e-14,44;CL:0000133,4.62e-14,44;CL:0002319,8.10e-14,43;CL:0000540,8.34e-12,33;CL:0000047,8.34e-12,33;CL:0000031,8.34e-12,33;CL:0000404,8.34e-12,33;CL:0000393,1.38e-08,39;CL:0000211,1.38e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.54e-32!73;UBERON:0005743!3.54e-32!73;UBERON:0000073!1.89e-30!75;UBERON:0001016!1.89e-30!75;UBERON:0000033!1.22e-29!63;UBERON:0001049!1.76e-28!52;UBERON:0005068!1.76e-28!52;UBERON:0006241!1.76e-28!52;UBERON:0007135!1.76e-28!52;UBERON:0000955!5.73e-28!50;UBERON:0006238!5.73e-28!50;UBERON:0002616!3.20e-27!49;UBERON:0002346!1.88e-25!71;UBERON:0003075!1.88e-25!71;UBERON:0007284!1.88e-25!71;UBERON:0003056!3.36e-25!49;UBERON:0004121!1.44e-24!102;UBERON:0000924!1.44e-24!102;UBERON:0006601!1.44e-24!102;UBERON:0003080!6.29e-23!40;UBERON:0002780!2.43e-22!39;UBERON:0001890!2.43e-22!39;UBERON:0006240!2.43e-22!39;UBERON:0007811!7.19e-21!86;UBERON:0000153!7.99e-21!94;UBERON:0002020!4.53e-20!34;UBERON:0002791!8.93e-18!29;UBERON:0003528!8.93e-18!29;UBERON:0001893!8.93e-18!29;UBERON:0000956!8.20e-14!21;UBERON:0001869!8.20e-14!21;UBERON:0000203!8.20e-14!21;UBERON:0002619!8.24e-12!17;UBERON:0002021!3.00e-08!10;UBERON:0000411!3.00e-08!10;UBERON:0001950!3.00e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.12e-42,73;UBERON:0000073,2.73e-40,54;UBERON:0001016,5.48e-40,75;UBERON:0002346,1.49e-39,64;UBERON:0003075,1.49e-39,64;UBERON:0007284,1.49e-39,64;UBERON:0001049,1.98e-38,52;UBERON:0005068,1.98e-38,52;UBERON:0006241,1.98e-38,52;UBERON:0007135,1.98e-38,52;UBERON:0004121,2.85e-36,95;UBERON:0000924,2.85e-36,95;UBERON:0006601,2.85e-36,95;UBERON:0000955,3.90e-35,47;UBERON:0006238,3.90e-35,47;UBERON:0002616,4.16e-34,46;UBERON:0003056,6.95e-34,49;UBERON:0010371,9.66e-33,73;UBERON:0003080,1.58e-31,40;UBERON:0002780,1.06e-30,39;UBERON:0001890,1.06e-30,39;UBERON:0006240,1.06e-30,39;UBERON:0002020,1.64e-27,34;UBERON:0003528,2.74e-24,29;UBERON:0002791,2.74e-24,29;UBERON:0001893,2.74e-24,29;UBERON:0010314,6.25e-22,92;UBERON:0000956,1.00e-18,21;UBERON:0001869,1.00e-18,21;UBERON:0000203,1.00e-18,21;UBERON:0002619,6.42e-16,17;UBERON:0002021,6.21e-11,10;UBERON:0000411,6.21e-11,10;UBERON:0001950,6.21e-11,10;UBERON:0000025,4.18e-08,114;UBERON:0003076,3.02e-07,12;UBERON:0003057,3.02e-07,12;UBERON:0001894,3.16e-07,10;UBERON:0006222,3.16e-07,10;UBERON:0004111,6.57e-07,122|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0,1.54947988129892,0.422366166455,0.468129052643987,0,0.159544317990673,1.02720437958723,1.04904482902797,0.666219523631325,1.21485160433896,0,1.89277299214943,1.50825876966313,1.27316895539409,3.99703463710028,2.87943758482567,1.04479915655574,1.11994695955385,0.22940928106717,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0,0.550640256485045,0.782391344348039,4.14247797122848,9.00713349211335,3.30530828426282,1.53985063787899,5.75010257459886,2.51673909086605,1.45072428402269,1.34437519656986,0,0,0,7.48570905180512,16.9277113367051,10.1413024560989,1.69422266034566,0,0.449949858640699,0,0,2.69640099466564,6.53171119046643,5.59923906465779,5.53524347159932,4.20649922702764,2.57085885963423,4.63823935998388,7.59442955132715,5.75072826109418,11.9498442259303,6.60695285996332,7.53355294702608,7.0659005297872,13.4524013484798,10.0636407962651,9.37644067002168,2.79182999001381,1.68828783009504,2.29197371665215,6.18720029494702,4.55589378557129,5.59198337475902,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,0.842666520790511,0.681721290312231,0.519572009205738,0,1.26759077799012,0,0,0,0.865964164044856,0.253359865475099,1.01104889002957,0.45673551887624,1.55362730188303,0.29688427812965,0.173485326766136,0,0,0.753613202763113,0.117588707135705,0.251333182659351,0,0.578397427679647,0,0.161766849947409,1.32504911076236,0,0,9.66176630138106,11.3101221679266,0,0.479260498023681,0,0.254140454146129,7.18995069143149,24.7050325522058,9.67538511269056,17.5562563394199,20.2015211290961,11.2205544062162,12.6548185192851,0.712875546952214,0.124406970610093,0.252722758433675,3.57751155007006,2.34216797332867,1.60931473103431,1.0803727788321,0.753524089178575,3.26575195926374,2.17793324484245,1.3118241438362,4.65666067330228,1.07783996466421,1.51284864134255,2.11141348996739,0.43839146485515,0.834141747676794,0,0.411564272815887,1.59227413454795,0,0.257347907114715,0,0.828503090142008,1.40715635988658,0.180062061461015,0.946978942340841,0.787056926989615,0.617068451549513,0.930135779001631,0.536546802799238,0.583826711835847,0.493679549740441,0,0.729619285912702,0.438599962275997,0.878200461164203,0.939444931322602,6.72927835405207,9.77593817603202,0,0,1.2797295032114,0.928946687441754,0.644337306610467,0,0.22237804384487,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0.569003702859245,0.799739588268102,1.1270773567308,0,0.193952487167626,0.420814919341911,0.379419222745544,0.590440591918409,0.627994911365499,0.370191491765402,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0.947457058852424,0.977789858652155,0.339490171550376,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.518054945597687,0,0,0,0,0.275936746304732,5.29816946959713,2.69586879162067,0.327869890753351,1.51482556322624,1.57754109708128,0.780877488593277,0.430846795465598,1.67278158566786,1.55959071857676,0,0.404810701674894,0.292255857911312,0.395287777946524,19.2792789853084,0.141940085208269,1.06839362200353,0.81443479676788,2.3095817216155,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,0,0,0,0,0.632073515871632,0,0,2.04263763452273,3.96134406868882,3.88076051348264,3.21505552547388,4.07882537377229,3.21063871683727,3.9491764944509,5.17590413494819,0,0,0,0.32977250588296,0.645857706783622,0.180938774784468,0.238744688006273,0.164140899745061,0.291480836629851,5.00648315428376,0.854354403989263,0.412773735926445,0.370389054739423,0,0.410082683163076,0.686334519619568,1.86976272993241,1.53946597556024,1.38199973804424,0.954670618015114,0.949007980743406,0,0.324016022465404,0.418176592028937,0.218362563746178,0,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.129159823477731,0.337912250981556,0.58678619322877,0.13020438484395,0.524296722128554,0.241584120826006,0.288030006257865,0.948033361884535,0.405450430580328,0.102710957164827,0.389762468933385,0.358053391334963,0.993406773906324,0.120195449519969,0.443068581523732,0.807731599585181,0.304827226619999,0.806609481094724,0.487289403698762,0.865906574762965,0.701261413089414,0.453460767230423,0,0.0897138566094757,0,0,0.375364950902364,2.19781949120718,0.214368379079066,0,28.8023439734704,25.7782132444019,30.363462212288,27.3246559926463,21.2375581128899,30.215755895588,17.550585006027,18.463169332193,27.6416869480365,25.888015587591,1.45302286617847,2.79317411380722,2.21953687480374,1.21553358534147,0.838452650511929,1.10306105070008,2.22246727801615,0.824140228955577,1.60459604795908,1.26348605881899,1.01391719956096,0.754505365544305,0.561849044819294,0.640251524048693,0.746661096422973,2.38146845641537,1.50649623728312,1.54327376370964,0.824171801606613,1.17759136107518,1.02860775715625,0.70990322463735,1.1921809497366,0.726732083161643,1.03520318456864,0.930760686808441,0.548783918618318,0.263069711437843,1.62964936615034,0,0.830445126869219,1.0835493061312,0.818462086339379,1.08455788830176,0.578719832943424,4.99621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,1.39120701372253|short_description=p3@Rhobtb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:246710 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91V93 | |||
|association_with_transcript=25bp_to_ENSMUST00000022665_5end | |||
|cluster_id=chr14:70205272..70205311,- | |||
|description=CAGE_peak_3_at_Rhobtb2_5end | |||
|id=chr14:70205272..70205311,- | |||
|ontology_enrichment_celltype=CL:0000117!2.11e-12!23;CL:0000337!2.11e-12!23;CL:0000221!1.40e-11!44;CL:0000133!1.40e-11!44;CL:0002319!2.09e-11!43;CL:0000540!7.64e-10!33;CL:0000047!7.64e-10!33;CL:0000031!7.64e-10!33;CL:0000404!7.64e-10!33;CL:0000055!1.92e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.51e-17,23;CL:0000337,9.51e-17,23;CL:0000221,4.62e-14,44;CL:0000133,4.62e-14,44;CL:0002319,8.10e-14,43;CL:0000540,8.34e-12,33;CL:0000047,8.34e-12,33;CL:0000031,8.34e-12,33;CL:0000404,8.34e-12,33;CL:0000393,1.38e-08,39;CL:0000211,1.38e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.54e-32!73;UBERON:0005743!3.54e-32!73;UBERON:0000073!1.89e-30!75;UBERON:0001016!1.89e-30!75;UBERON:0000033!1.22e-29!63;UBERON:0001049!1.76e-28!52;UBERON:0005068!1.76e-28!52;UBERON:0006241!1.76e-28!52;UBERON:0007135!1.76e-28!52;UBERON:0000955!5.73e-28!50;UBERON:0006238!5.73e-28!50;UBERON:0002616!3.20e-27!49;UBERON:0002346!1.88e-25!71;UBERON:0003075!1.88e-25!71;UBERON:0007284!1.88e-25!71;UBERON:0003056!3.36e-25!49;UBERON:0004121!1.44e-24!102;UBERON:0000924!1.44e-24!102;UBERON:0006601!1.44e-24!102;UBERON:0003080!6.29e-23!40;UBERON:0002780!2.43e-22!39;UBERON:0001890!2.43e-22!39;UBERON:0006240!2.43e-22!39;UBERON:0007811!7.19e-21!86;UBERON:0000153!7.99e-21!94;UBERON:0002020!4.53e-20!34;UBERON:0002791!8.93e-18!29;UBERON:0003528!8.93e-18!29;UBERON:0001893!8.93e-18!29;UBERON:0000956!8.20e-14!21;UBERON:0001869!8.20e-14!21;UBERON:0000203!8.20e-14!21;UBERON:0002619!8.24e-12!17;UBERON:0002021!3.00e-08!10;UBERON:0000411!3.00e-08!10;UBERON:0001950!3.00e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.12e-42,73;UBERON:0000073,2.73e-40,54;UBERON:0001016,5.48e-40,75;UBERON:0002346,1.49e-39,64;UBERON:0003075,1.49e-39,64;UBERON:0007284,1.49e-39,64;UBERON:0001049,1.98e-38,52;UBERON:0005068,1.98e-38,52;UBERON:0006241,1.98e-38,52;UBERON:0007135,1.98e-38,52;UBERON:0004121,2.85e-36,95;UBERON:0000924,2.85e-36,95;UBERON:0006601,2.85e-36,95;UBERON:0000955,3.90e-35,47;UBERON:0006238,3.90e-35,47;UBERON:0002616,4.16e-34,46;UBERON:0003056,6.95e-34,49;UBERON:0010371,9.66e-33,73;UBERON:0003080,1.58e-31,40;UBERON:0002780,1.06e-30,39;UBERON:0001890,1.06e-30,39;UBERON:0006240,1.06e-30,39;UBERON:0002020,1.64e-27,34;UBERON:0003528,2.74e-24,29;UBERON:0002791,2.74e-24,29;UBERON:0001893,2.74e-24,29;UBERON:0010314,6.25e-22,92;UBERON:0000956,1.00e-18,21;UBERON:0001869,1.00e-18,21;UBERON:0000203,1.00e-18,21;UBERON:0002619,6.42e-16,17;UBERON:0002021,6.21e-11,10;UBERON:0000411,6.21e-11,10;UBERON:0001950,6.21e-11,10;UBERON:0000025,4.18e-08,114;UBERON:0003076,3.02e-07,12;UBERON:0003057,3.02e-07,12;UBERON:0001894,3.16e-07,10;UBERON:0006222,3.16e-07,10;UBERON:0004111,6.57e-07,122 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0,1.54947988129892,0.422366166455,0.468129052643987,0,0.159544317990673,1.02720437958723,1.04904482902797,0.666219523631325,1.21485160433896,0,1.89277299214943,1.50825876966313,1.27316895539409,3.99703463710028,2.87943758482567,1.04479915655574,1.11994695955385,0.22940928106717,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0,0.550640256485045,0.782391344348039,4.14247797122848,9.00713349211335,3.30530828426282,1.53985063787899,5.75010257459886,2.51673909086605,1.45072428402269,1.34437519656986,0,0,0,7.48570905180512,16.9277113367051,10.1413024560989,1.69422266034566,0,0.449949858640699,0,0,2.69640099466564,6.53171119046643,5.59923906465779,5.53524347159932,4.20649922702764,2.57085885963423,4.63823935998388,7.59442955132715,5.75072826109418,11.9498442259303,6.60695285996332,7.53355294702608,7.0659005297872,13.4524013484798,10.0636407962651,9.37644067002168,2.79182999001381,1.68828783009504,2.29197371665215,6.18720029494702,4.55589378557129,5.59198337475902,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,0.842666520790511,0.681721290312231,0.519572009205738,0,1.26759077799012,0,0,0,0.865964164044856,0.253359865475099,1.01104889002957,0.45673551887624,1.55362730188303,0.29688427812965,0.173485326766136,0,0,0.753613202763113,0.117588707135705,0.251333182659351,0,0.578397427679647,0,0.161766849947409,1.32504911076236,0,0,9.66176630138106,11.3101221679266,0,0.479260498023681,0,0.254140454146129,7.18995069143149,24.7050325522058,9.67538511269056,17.5562563394199,20.2015211290961,11.2205544062162,12.6548185192851,0.712875546952214,0.124406970610093,0.252722758433675,3.57751155007006,2.34216797332867,1.60931473103431,1.0803727788321,0.753524089178575,3.26575195926374,2.17793324484245,1.3118241438362,4.65666067330228,1.07783996466421,1.51284864134255,2.11141348996739,0.43839146485515,0.834141747676794,0,0.411564272815887,1.59227413454795,0,0.257347907114715,0,0.828503090142008,1.40715635988658,0.180062061461015,0.946978942340841,0.787056926989615,0.617068451549513,0.930135779001631,0.536546802799238,0.583826711835847,0.493679549740441,0,0.729619285912702,0.438599962275997,0.878200461164203,0.939444931322602,6.72927835405207,9.77593817603202,0,0,1.2797295032114,0.928946687441754,0.644337306610467,0,0.22237804384487,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0.569003702859245,0.799739588268102,1.1270773567308,0,0.193952487167626,0.420814919341911,0.379419222745544,0.590440591918409,0.627994911365499,0.370191491765402,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0.947457058852424,0.977789858652155,0.339490171550376,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.518054945597687,0,0,0,0,0.275936746304732,5.29816946959713,2.69586879162067,0.327869890753351,1.51482556322624,1.57754109708128,0.780877488593277,0.430846795465598,1.67278158566786,1.55959071857676,0,0.404810701674894,0.292255857911312,0.395287777946524,19.2792789853084,0.141940085208269,1.06839362200353,0.81443479676788,2.3095817216155,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,0,0,0,0,0.632073515871632,0,0,2.04263763452273,3.96134406868882,3.88076051348264,3.21505552547388,4.07882537377229,3.21063871683727,3.9491764944509,5.17590413494819,0,0,0,0.32977250588296,0.645857706783622,0.180938774784468,0.238744688006273,0.164140899745061,0.291480836629851,5.00648315428376,0.854354403989263,0.412773735926445,0.370389054739423,0,0.410082683163076,0.686334519619568,1.86976272993241,1.53946597556024,1.38199973804424,0.954670618015114,0.949007980743406,0,0.324016022465404,0.418176592028937,0.218362563746178,0,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.129159823477731,0.337912250981556,0.58678619322877,0.13020438484395,0.524296722128554,0.241584120826006,0.288030006257865,0.948033361884535,0.405450430580328,0.102710957164827,0.389762468933385,0.358053391334963,0.993406773906324,0.120195449519969,0.443068581523732,0.807731599585181,0.304827226619999,0.806609481094724,0.487289403698762,0.865906574762965,0.701261413089414,0.453460767230423,0,0.0897138566094757,0,0,0.375364950902364,2.19781949120718,0.214368379079066,0,28.8023439734704,25.7782132444019,30.363462212288,27.3246559926463,21.2375581128899,30.215755895588,17.550585006027,18.463169332193,27.6416869480365,25.888015587591,1.45302286617847,2.79317411380722,2.21953687480374,1.21553358534147,0.838452650511929,1.10306105070008,2.22246727801615,0.824140228955577,1.60459604795908,1.26348605881899,1.01391719956096,0.754505365544305,0.561849044819294,0.640251524048693,0.746661096422973,2.38146845641537,1.50649623728312,1.54327376370964,0.824171801606613,1.17759136107518,1.02860775715625,0.70990322463735,1.1921809497366,0.726732083161643,1.03520318456864,0.930760686808441,0.548783918618318,0.263069711437843,1.62964936615034,0,0.830445126869219,1.0835493061312,0.818462086339379,1.08455788830176,0.578719832943424,4.99621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,1.39120701372253 | |||
|short_description=p3@Rhobtb2 | |||
}} |
Revision as of 17:47, 4 August 2015
Short description: | p3@Rhobtb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rhobtb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 25bp_to_ENSMUST00000022665_5end |
EntrezGene: | 246710 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.51e-17 | 23 |
neuroblast (sensu Vertebrata) | 9.51e-17 | 23 |
ectodermal cell | 4.62e-14 | 44 |
neurectodermal cell | 4.62e-14 | 44 |
neural cell | 8.10e-14 | 43 |
neuron | 8.34e-12 | 33 |
neuronal stem cell | 8.34e-12 | 33 |
neuroblast | 8.34e-12 | 33 |
electrically signaling cell | 8.34e-12 | 33 |
electrically responsive cell | 1.38e-08 | 39 |
electrically active cell | 1.38e-08 | 39 |