FFCP PHASE1:Mm9::chr4:118084341..118084363,+: Difference between revisions
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{{FFCP|EntrezGene=80509|HGNC=|MCL_coexpression_id=130|UniProt=|association_with_transcript=108bp_to_ENSMUST00000135201_5end|description=CAGE_peak_2_at_Med8_5end|id=chr4:118084341..118084363,+|ontology_enrichment_celltype=CL:0000988!3.03e-09!32;CL:0002032!3.03e-09!32;CL:0000037!3.03e-09!32;CL:0000566!3.03e-09!32;CL:0000837!3.03e-09!32;CL:0000049!9.84e-09!19;CL:0002320!4.44e-07!46;CL:0000134!4.44e-07!46|ontology_enrichment_celltype_v019_2=CL:0000557,5.58e-11,7;CL:0002476,7.56e-10,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.17e-07,3;DOID:4045,4.17e-07,3|ontology_enrichment_uberon=UBERON:0002384!4.44e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.74e-18,1;UBERON:0001097,1.74e-18,1;UBERON:0003968,1.74e-18,1;UBERON:0001467,1.74e-18,1;UBERON:0002204,2.11e-09,32;UBERON:0001474,6.02e-08,22;UBERON:0004765,6.02e-08,22;UBERON:0001434,6.02e-08,22;UBERON:0002465,4.77e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0.809901069559304,0,0.630924330716475,0.274228867211478,0,0.0850432901510698,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.837063261473815,2.3440060335714,0.523523743973798,0,0.683045484958446,0.485510353031154,0.125896817975577,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0.173485326766136,0,0,0,0,0,0,0,3.5384422077995,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,0,11.5806558201622,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0.512612642393558,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.429742108096597,0,0.220591419119515,0|short_description=p2@Med8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:80509 | |||
|HGNC= | |||
|MCL_coexpression_id=130 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=108bp_to_ENSMUST00000135201_5end | |||
|cluster_id=chr4:118084341..118084363,+ | |||
|description=CAGE_peak_2_at_Med8_5end | |||
|id=chr4:118084341..118084363,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.03e-09!32;CL:0002032!3.03e-09!32;CL:0000037!3.03e-09!32;CL:0000566!3.03e-09!32;CL:0000837!3.03e-09!32;CL:0000049!9.84e-09!19;CL:0002320!4.44e-07!46;CL:0000134!4.44e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,5.58e-11,7;CL:0002476,7.56e-10,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.17e-07,3;DOID:4045,4.17e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.44e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.74e-18,1;UBERON:0001097,1.74e-18,1;UBERON:0003968,1.74e-18,1;UBERON:0001467,1.74e-18,1;UBERON:0002204,2.11e-09,32;UBERON:0001474,6.02e-08,22;UBERON:0004765,6.02e-08,22;UBERON:0001434,6.02e-08,22;UBERON:0002465,4.77e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0.809901069559304,0,0.630924330716475,0.274228867211478,0,0.0850432901510698,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.837063261473815,2.3440060335714,0.523523743973798,0,0.683045484958446,0.485510353031154,0.125896817975577,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0.173485326766136,0,0,0,0,0,0,0,3.5384422077995,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,0,11.5806558201622,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0.512612642393558,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p2@Med8 | |||
}} |
Revision as of 15:38, 4 August 2015
Short description: | p2@Med8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Med8_5end |
Coexpression cluster: | MCL_coexpression_mm9:130 |
Association with transcript: | 108bp_to_ENSMUST00000135201_5end |
EntrezGene: | 80509 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 5.58e-11 | 7 |
bone marrow macrophage | 7.56e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.74e-18 | 1 |
axillary lymph node | 1.74e-18 | 1 |
peripheral lymph node | 1.74e-18 | 1 |
shoulder | 1.74e-18 | 1 |
musculoskeletal system | 2.11e-09 | 32 |
bone element | 6.02e-08 | 22 |
skeletal element | 6.02e-08 | 22 |
skeletal system | 6.02e-08 | 22 |
lymphoid system | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.17e-07 | 3 |
muscle cancer | 4.17e-07 | 3 |