FFCP PHASE1:Mm9::chr10:63553013..63553045,-: Difference between revisions
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{{FFCP|EntrezGene=216028|HGNC=|MCL_coexpression_id=39|UniProt=Q8BZ81|association_with_transcript=0bp_to_ENSMUST00000105439,ENSMUST00000131945_5end|description=CAGE_peak_1_at_Lrrtm3_5end|id=chr10:63553013..63553045,-|ontology_enrichment_celltype=CL:0000540!8.00e-15!33;CL:0000047!8.00e-15!33;CL:0000031!8.00e-15!33;CL:0000404!8.00e-15!33;CL:0000221!5.56e-13!44;CL:0000133!5.56e-13!44;CL:0000117!9.05e-13!23;CL:0000337!9.05e-13!23;CL:0002319!1.25e-12!43;CL:0000393!2.67e-10!39;CL:0000211!2.67e-10!39;CL:0000055!1.23e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.04e-18,33;CL:0000047,6.04e-18,33;CL:0000031,6.04e-18,33;CL:0000404,6.04e-18,33;CL:0000117,2.09e-15,23;CL:0000337,2.09e-15,23;CL:0000221,1.57e-13,44;CL:0000133,1.57e-13,44;CL:0000393,3.54e-13,39;CL:0000211,3.54e-13,39;CL:0002319,4.14e-13,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.98e-31!75;UBERON:0001016!1.98e-31!75;UBERON:0001017!3.44e-31!73;UBERON:0005743!3.44e-31!73;UBERON:0004121!7.46e-28!102;UBERON:0000924!7.46e-28!102;UBERON:0006601!7.46e-28!102;UBERON:0001049!8.26e-25!52;UBERON:0005068!8.26e-25!52;UBERON:0006241!8.26e-25!52;UBERON:0007135!8.26e-25!52;UBERON:0002346!7.49e-24!71;UBERON:0003075!7.49e-24!71;UBERON:0007284!7.49e-24!71;UBERON:0000033!1.20e-23!63;UBERON:0000955!1.54e-23!50;UBERON:0006238!1.54e-23!50;UBERON:0002616!7.84e-23!49;UBERON:0003056!8.01e-20!49;UBERON:0003080!2.69e-19!40;UBERON:0002020!1.08e-18!34;UBERON:0002780!1.22e-18!39;UBERON:0001890!1.22e-18!39;UBERON:0006240!1.22e-18!39;UBERON:0002791!1.52e-15!29;UBERON:0003528!1.52e-15!29;UBERON:0001893!1.52e-15!29;UBERON:0007811!2.74e-12!86;UBERON:0000153!1.03e-11!94;UBERON:0000956!4.63e-11!21;UBERON:0001869!4.63e-11!21;UBERON:0000203!4.63e-11!21;UBERON:0002619!5.11e-09!17;UBERON:0002021!2.87e-08!10;UBERON:0000411!2.87e-08!10;UBERON:0001950!2.87e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.92e-36,73;UBERON:0001016,1.13e-35,75;UBERON:0000073,3.89e-31,54;UBERON:0004121,9.42e-31,95;UBERON:0000924,9.42e-31,95;UBERON:0006601,9.42e-31,95;UBERON:0002346,3.41e-30,64;UBERON:0003075,3.41e-30,64;UBERON:0007284,3.41e-30,64;UBERON:0001049,2.03e-29,52;UBERON:0005068,2.03e-29,52;UBERON:0006241,2.03e-29,52;UBERON:0007135,2.03e-29,52;UBERON:0010371,2.38e-26,73;UBERON:0000955,2.02e-25,47;UBERON:0006238,2.02e-25,47;UBERON:0002616,1.43e-24,46;UBERON:0003056,3.85e-23,49;UBERON:0003080,4.21e-23,40;UBERON:0002020,2.48e-22,34;UBERON:0002780,2.71e-22,39;UBERON:0001890,2.71e-22,39;UBERON:0006240,2.71e-22,39;UBERON:0003528,1.89e-18,29;UBERON:0002791,1.89e-18,29;UBERON:0001893,1.89e-18,29;UBERON:0010314,5.94e-16,92;UBERON:0000956,6.32e-13,21;UBERON:0001869,6.32e-13,21;UBERON:0000203,6.32e-13,21;UBERON:0002619,2.07e-10,17;UBERON:0002021,7.54e-10,10;UBERON:0000411,7.54e-10,10;UBERON:0001950,7.54e-10,10;UBERON:0003076,8.95e-07,12;UBERON:0003057,8.95e-07,12;UBERON:0002420,9.22e-07,8;UBERON:0007245,9.22e-07,8;UBERON:0010009,9.22e-07,8;UBERON:0010011,9.22e-07,8;UBERON:0000454,9.22e-07,8|phase1_expression=1.92178616525753,0,0,0,0.500895729946347,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,1.09843091367236,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,0,0.286533439938757,0,10.1158230429799,12.6957835025288,12.0427966666174,0.338844532069132,0,0,0,0,0.898800331555214,0,5.70292867696627,8.50537411489651,4.83747411108179,21.4238238302853,19.436431603742,4.40966877173835,2.58782771749238,1.83843757322004,22.0231761998777,17.1101033034152,20.7368819895929,8.96826756565318,5.76372154695181,8.33461392890816,15.355064945076,12.9435400307286,14.515833538797,23.8649154233671,24.6303007782448,12.8615617619457,0.530083353332288,3.24957708459178,0,0,0.679971333707751,0,0,0,0.983110940922263,0,0,0,3.52108549441701,0,0,0,0,0,0,1.7127581957859,0,0.593768556259299,0.173485326766136,0,1.15307748628029,0.753613202763113,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,63.2406521544942,68.6985198348133,0.510914110417183,0,0,0,23.666921025962,44.8350590762254,12.1884721549478,34.9386883586476,35.5444485689159,24.5189892580281,33.7461827180936,0,0,0.252722758433675,1.47309299120532,0.130120442962704,0.229902104433473,1.80062129805349,2.56198190320716,1.63287597963187,2.43416068541215,2.24884138943349,5.17406741478031,0,0.756424320671277,0.527853372491847,1.31517439456545,1.11218899690239,0.696504333044333,1.02891068203972,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.405344047729279,0,0.439100230582101,0.134206418760372,12.1968170167194,8.12946437796347,0,0,0,1.62565670302307,1.54640953586512,2.01683524623343,1.33426826306922,2.28270751335071,0.949058123089023,1.97638745668813,0.754005626400808,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216028 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BZ81 | |||
|association_with_transcript=0bp_to_ENSMUST00000105439,ENSMUST00000131945_5end | |||
|cluster_id=chr10:63553013..63553045,- | |||
|description=CAGE_peak_1_at_Lrrtm3_5end | |||
|id=chr10:63553013..63553045,- | |||
|ontology_enrichment_celltype=CL:0000540!8.00e-15!33;CL:0000047!8.00e-15!33;CL:0000031!8.00e-15!33;CL:0000404!8.00e-15!33;CL:0000221!5.56e-13!44;CL:0000133!5.56e-13!44;CL:0000117!9.05e-13!23;CL:0000337!9.05e-13!23;CL:0002319!1.25e-12!43;CL:0000393!2.67e-10!39;CL:0000211!2.67e-10!39;CL:0000055!1.23e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.04e-18,33;CL:0000047,6.04e-18,33;CL:0000031,6.04e-18,33;CL:0000404,6.04e-18,33;CL:0000117,2.09e-15,23;CL:0000337,2.09e-15,23;CL:0000221,1.57e-13,44;CL:0000133,1.57e-13,44;CL:0000393,3.54e-13,39;CL:0000211,3.54e-13,39;CL:0002319,4.14e-13,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.98e-31!75;UBERON:0001016!1.98e-31!75;UBERON:0001017!3.44e-31!73;UBERON:0005743!3.44e-31!73;UBERON:0004121!7.46e-28!102;UBERON:0000924!7.46e-28!102;UBERON:0006601!7.46e-28!102;UBERON:0001049!8.26e-25!52;UBERON:0005068!8.26e-25!52;UBERON:0006241!8.26e-25!52;UBERON:0007135!8.26e-25!52;UBERON:0002346!7.49e-24!71;UBERON:0003075!7.49e-24!71;UBERON:0007284!7.49e-24!71;UBERON:0000033!1.20e-23!63;UBERON:0000955!1.54e-23!50;UBERON:0006238!1.54e-23!50;UBERON:0002616!7.84e-23!49;UBERON:0003056!8.01e-20!49;UBERON:0003080!2.69e-19!40;UBERON:0002020!1.08e-18!34;UBERON:0002780!1.22e-18!39;UBERON:0001890!1.22e-18!39;UBERON:0006240!1.22e-18!39;UBERON:0002791!1.52e-15!29;UBERON:0003528!1.52e-15!29;UBERON:0001893!1.52e-15!29;UBERON:0007811!2.74e-12!86;UBERON:0000153!1.03e-11!94;UBERON:0000956!4.63e-11!21;UBERON:0001869!4.63e-11!21;UBERON:0000203!4.63e-11!21;UBERON:0002619!5.11e-09!17;UBERON:0002021!2.87e-08!10;UBERON:0000411!2.87e-08!10;UBERON:0001950!2.87e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.92e-36,73;UBERON:0001016,1.13e-35,75;UBERON:0000073,3.89e-31,54;UBERON:0004121,9.42e-31,95;UBERON:0000924,9.42e-31,95;UBERON:0006601,9.42e-31,95;UBERON:0002346,3.41e-30,64;UBERON:0003075,3.41e-30,64;UBERON:0007284,3.41e-30,64;UBERON:0001049,2.03e-29,52;UBERON:0005068,2.03e-29,52;UBERON:0006241,2.03e-29,52;UBERON:0007135,2.03e-29,52;UBERON:0010371,2.38e-26,73;UBERON:0000955,2.02e-25,47;UBERON:0006238,2.02e-25,47;UBERON:0002616,1.43e-24,46;UBERON:0003056,3.85e-23,49;UBERON:0003080,4.21e-23,40;UBERON:0002020,2.48e-22,34;UBERON:0002780,2.71e-22,39;UBERON:0001890,2.71e-22,39;UBERON:0006240,2.71e-22,39;UBERON:0003528,1.89e-18,29;UBERON:0002791,1.89e-18,29;UBERON:0001893,1.89e-18,29;UBERON:0010314,5.94e-16,92;UBERON:0000956,6.32e-13,21;UBERON:0001869,6.32e-13,21;UBERON:0000203,6.32e-13,21;UBERON:0002619,2.07e-10,17;UBERON:0002021,7.54e-10,10;UBERON:0000411,7.54e-10,10;UBERON:0001950,7.54e-10,10;UBERON:0003076,8.95e-07,12;UBERON:0003057,8.95e-07,12;UBERON:0002420,9.22e-07,8;UBERON:0007245,9.22e-07,8;UBERON:0010009,9.22e-07,8;UBERON:0010011,9.22e-07,8;UBERON:0000454,9.22e-07,8 | |||
|phase1_expression=1.92178616525753,0,0,0,0.500895729946347,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,1.09843091367236,0.194429899074283,0.699932108126813,1.43752564364972,0,0,0,0,0.286533439938757,0,10.1158230429799,12.6957835025288,12.0427966666174,0.338844532069132,0,0,0,0,0.898800331555214,0,5.70292867696627,8.50537411489651,4.83747411108179,21.4238238302853,19.436431603742,4.40966877173835,2.58782771749238,1.83843757322004,22.0231761998777,17.1101033034152,20.7368819895929,8.96826756565318,5.76372154695181,8.33461392890816,15.355064945076,12.9435400307286,14.515833538797,23.8649154233671,24.6303007782448,12.8615617619457,0.530083353332288,3.24957708459178,0,0,0.679971333707751,0,0,0,0.983110940922263,0,0,0,3.52108549441701,0,0,0,0,0,0,1.7127581957859,0,0.593768556259299,0.173485326766136,0,1.15307748628029,0.753613202763113,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,63.2406521544942,68.6985198348133,0.510914110417183,0,0,0,23.666921025962,44.8350590762254,12.1884721549478,34.9386883586476,35.5444485689159,24.5189892580281,33.7461827180936,0,0,0.252722758433675,1.47309299120532,0.130120442962704,0.229902104433473,1.80062129805349,2.56198190320716,1.63287597963187,2.43416068541215,2.24884138943349,5.17406741478031,0,0.756424320671277,0.527853372491847,1.31517439456545,1.11218899690239,0.696504333044333,1.02891068203972,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.405344047729279,0,0.439100230582101,0.134206418760372,12.1968170167194,8.12946437796347,0,0,0,1.62565670302307,1.54640953586512,2.01683524623343,1.33426826306922,2.28270751335071,0.949058123089023,1.97638745668813,0.754005626400808,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0,0,0.651859905768103,1.35796068620151,1.40814148973101,0.167506257441816,0.238043640886014,0,1.26108115284953,1.32878813789265,1.91345722388985,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,13.3256989689867,14.6514608240254,0,0.252470927204373,1.26203287766503,1.95219372148319,1.72338718186239,2.38968797952552,6.23836287430704,7.64306633129848,1.21443210502468,4.09158201075837,3.16230222357219,26.3483479465882,1.41940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0,0,0,0,7.48967132658334,1.62054984628179,1.68166288917581,1.28602221018955,1.95074257006501,2.49716344642899,3.45552943264454,4.56697423671899,0,0,0.441056796109924,1.15420377059036,0.968786560175433,0.180938774784468,0.238744688006273,0.328281799490123,0.874442509889552,14.0923229527987,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,2.86401185404534,0.632671987162271,2.03319467126849,2.70013352054503,1.46361807210128,2.83871332870031,2.42755823492677,1.81837602595739,0.523511883968059,0.648074866458964,0,0,0.897099276263873,0.992750942742586,1.16670713006429,1.16243841129958,1.35164900392623,1.05621514781179,0.5208175393758,0.104859344425711,0,0,0,0.608175645870493,1.33524244314275,0.909445760844565,0.179026695667481,0.39736270956253,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0,0,0,0,29.9318476587045,32.6830917920096,29.7905666988486,42.9632955859219,30.1436308699083,44.5682399459923,31.0510350106631,43.2308355095252,34.4388230827996,31.583379016861,0.103787347584177,2.39414924040619,2.04880326904961,2.43106717068294,2.30574478890781,3.8607136774503,2.889207461421,2.88449080134452,3.20919209591815,4.54854981174835,3.04175159868288,4.52703219326583,4.86935838843389,4.35371036353111,4.47996657853783,2.85776214769844,1.97003354106254,2.70072908649187,4.12085900803307,3.23837624295674,5.48590803816665,3.54951612318675,3.81497903915713,3.63366041580821,4.23492211868988,4.06150117880047,5.48783918618318,3.41990624869196,3.66671107383827,1.12228454331548,2.72860541685601,2.46261205938909,4.09231043169689,4.95797891795091,1.73615949883027,3.49734809113124,1.16965804222704,1.93383948643468,0.57386499620653,1.32354851471709,0.231867835620421 | |||
|short_description=p1@Lrrtm3 | |||
}} |
Revision as of 14:32, 4 August 2015
Short description: | p1@Lrrtm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrtm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_ENSMUST00000105439, ENSMUST00000131945_5end |
EntrezGene: | 216028 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.04e-18 | 33 |
neuronal stem cell | 6.04e-18 | 33 |
neuroblast | 6.04e-18 | 33 |
electrically signaling cell | 6.04e-18 | 33 |
CNS neuron (sensu Vertebrata) | 2.09e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-15 | 23 |
ectodermal cell | 1.57e-13 | 44 |
neurectodermal cell | 1.57e-13 | 44 |
electrically responsive cell | 3.54e-13 | 39 |
electrically active cell | 3.54e-13 | 39 |
neural cell | 4.14e-13 | 43 |