FFCP PHASE1:Mm9::chr19:7341921..7341939,-: Difference between revisions
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|id=chr19:7341921..7341939,-
|short_description=p@chr19:7341921..7341939,-
|description=CAGE_peak_at_chr19:7341921..7341939,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1241 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:7341921..7341939,- | |||
|description=CAGE_peak_at_chr19:7341921..7341939,- | |||
|id=chr19:7341921..7341939,- | |||
|ontology_enrichment_celltype=CL:0000540!4.95e-12!33;CL:0000047!4.95e-12!33;CL:0000031!4.95e-12!33;CL:0000404!4.95e-12!33;CL:0002319!3.46e-11!43;CL:0000221!8.73e-11!44;CL:0000133!8.73e-11!44;CL:0002609!2.80e-10!6;CL:0000393!2.59e-09!39;CL:0000211!2.59e-09!39;CL:0000107!3.64e-09!9;CL:0000055!9.90e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.83e-41,6;CL:0000117,2.24e-15,23;CL:0000337,2.24e-15,23;CL:0000540,1.92e-14,33;CL:0000047,1.92e-14,33;CL:0000031,1.92e-14,33;CL:0000404,1.92e-14,33;CL:0002608,3.65e-14,3;CL:0000393,3.36e-12,39;CL:0000211,3.36e-12,39;CL:0002319,4.74e-11,43;CL:0000221,8.54e-11,44;CL:0000133,8.54e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.49e-11!102;UBERON:0000924!7.49e-11!102;UBERON:0006601!7.49e-11!102;UBERON:0003056!3.11e-10!49;UBERON:0001017!7.84e-10!73;UBERON:0005743!7.84e-10!73;UBERON:0000073!2.39e-09!75;UBERON:0001016!2.39e-09!75;UBERON:0002410!3.64e-09!9;UBERON:0002346!6.29e-09!71;UBERON:0003075!6.29e-09!71;UBERON:0007284!6.29e-09!71;UBERON:0000970!4.18e-08!9;UBERON:0000019!4.18e-08!9;UBERON:0000047!4.18e-08!9;UBERON:0004088!4.18e-08!9;UBERON:0002104!4.18e-08!9;UBERON:0001456!4.18e-08!9;UBERON:0003072!4.18e-08!9;UBERON:0003071!4.18e-08!9;UBERON:0004128!4.18e-08!9;UBERON:0000033!4.21e-08!63;UBERON:0000010!3.54e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.50e-12,21;UBERON:0001869,5.50e-12,21;UBERON:0000203,5.50e-12,21;UBERON:0003056,1.17e-09,49;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0003528,1.03e-08,29;UBERON:0002791,1.03e-08,29;UBERON:0001893,1.03e-08,29;UBERON:0010371,2.39e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0002020,1.92e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,1.97010263386108,1.75507719831198,2.10324961351382,0,0,0.857435594504678,1.43768206527355,2.75765635983006,0,0,0,0.395658863190582,0.182975287204819,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0,0.20778804455956,0,0,0,0,0,0.650602214813519,1.37941262660084,0.900310649026746,0.452114453507145,0.680364991513279,0.896796041993948,1.12442069471675,0,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.720332286654991,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0.390438744296638,1.72338718186239,0.238968797952552,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,1.97010263386108,1.75507719831198,2.10324961351382,0,0,0.857435594504678,1.43768206527355,2.75765635983006,0,0,0,0.395658863190582,0.182975287204819,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0,0.20778804455956,0,0,0,0,0,0.650602214813519,1.37941262660084,0.900310649026746,0.452114453507145,0.680364991513279,0.896796041993948,1.12442069471675,0,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.720332286654991,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0.390438744296638,1.72338718186239,0.238968797952552,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr19:7341921..7341939,- | |||
}} | }} |
Latest revision as of 13:14, 4 August 2015
Short description: | p@chr19:7341921..7341939, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:7341921..7341939, - |
Coexpression cluster: | MCL_coexpression_mm9:1241 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.83e-41 | 6 |
CNS neuron (sensu Vertebrata) | 2.24e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-15 | 23 |
neuron | 1.92e-14 | 33 |
neuronal stem cell | 1.92e-14 | 33 |
neuroblast | 1.92e-14 | 33 |
electrically signaling cell | 1.92e-14 | 33 |
hippocampal neuron | 3.65e-14 | 3 |
electrically responsive cell | 3.36e-12 | 39 |
electrically active cell | 3.36e-12 | 39 |
neural cell | 4.74e-11 | 43 |
ectodermal cell | 8.54e-11 | 44 |
neurectodermal cell | 8.54e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 5.50e-12 | 21 |
cerebral hemisphere | 5.50e-12 | 21 |
pallium | 5.50e-12 | 21 |
pre-chordal neural plate | 1.17e-09 | 49 |
neurectoderm | 1.44e-09 | 64 |
neural plate | 1.44e-09 | 64 |
presumptive neural plate | 1.44e-09 | 64 |
brain grey matter | 1.03e-08 | 29 |
regional part of telencephalon | 1.03e-08 | 29 |
telencephalon | 1.03e-08 | 29 |
ecto-epithelium | 2.39e-08 | 73 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
gray matter | 1.92e-07 | 34 |