FFCP PHASE1:Mm9::chr19:7062011..7062024,-: Difference between revisions
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{{FFCP|EntrezGene=22340|HGNC=|MCL_coexpression_id=1|UniProt=P49766|association_with_transcript=94bp_to_ENSMUST00000130048_5end|description=CAGE_peak_4_at_Vegfb_5end|id=chr19:7062011..7062024,-|ontology_enrichment_celltype=CL:0000117!3.60e-08!23;CL:0000337!3.60e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.25e-12,23;CL:0000337,9.25e-12,23;CL:0000540,1.15e-07,33;CL:0000047,1.15e-07,33;CL:0000031,1.15e-07,33;CL:0000404,1.15e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.00e-17!52;UBERON:0005068!3.00e-17!52;UBERON:0006241!3.00e-17!52;UBERON:0007135!3.00e-17!52;UBERON:0000955!4.18e-16!50;UBERON:0006238!4.18e-16!50;UBERON:0002616!1.45e-15!49;UBERON:0001017!7.19e-15!73;UBERON:0005743!7.19e-15!73;UBERON:0000073!7.93e-14!75;UBERON:0001016!7.93e-14!75;UBERON:0002020!1.93e-13!34;UBERON:0000033!5.56e-13!63;UBERON:0004121!1.36e-11!102;UBERON:0000924!1.36e-11!102;UBERON:0006601!1.36e-11!102;UBERON:0004111!1.70e-11!122;UBERON:0003080!3.07e-11!40;UBERON:0002791!9.07e-11!29;UBERON:0003528!9.07e-11!29;UBERON:0001893!9.07e-11!29;UBERON:0002780!1.18e-10!39;UBERON:0001890!1.18e-10!39;UBERON:0006240!1.18e-10!39;UBERON:0002346!1.51e-10!71;UBERON:0003075!1.51e-10!71;UBERON:0007284!1.51e-10!71;UBERON:0000025!2.14e-10!114;UBERON:0003056!7.04e-08!49;UBERON:0007811!1.96e-07!86;UBERON:0003076!3.28e-07!12;UBERON:0003057!3.28e-07!12;UBERON:0000956!3.81e-07!21;UBERON:0001869!3.81e-07!21;UBERON:0000203!3.81e-07!21;UBERON:0000153!4.43e-07!94;UBERON:0003103!8.22e-07!43;UBERON:0000477!8.84e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.79e-24,54;UBERON:0001049,1.80e-22,52;UBERON:0005068,1.80e-22,52;UBERON:0006241,1.80e-22,52;UBERON:0007135,1.80e-22,52;UBERON:0001017,5.01e-22,73;UBERON:0001016,4.32e-21,75;UBERON:0010314,2.40e-20,92;UBERON:0002020,1.89e-19,34;UBERON:0000955,1.40e-17,47;UBERON:0006238,1.40e-17,47;UBERON:0002616,1.14e-16,46;UBERON:0002346,3.26e-16,64;UBERON:0003075,3.26e-16,64;UBERON:0007284,3.26e-16,64;UBERON:0004121,4.92e-16,95;UBERON:0000924,4.92e-16,95;UBERON:0006601,4.92e-16,95;UBERON:0004111,2.18e-15,122;UBERON:0010371,8.00e-15,73;UBERON:0000025,1.11e-14,114;UBERON:0003528,1.76e-14,29;UBERON:0002791,1.76e-14,29;UBERON:0001893,1.76e-14,29;UBERON:0003080,6.56e-13,40;UBERON:0002780,6.17e-12,39;UBERON:0001890,6.17e-12,39;UBERON:0006240,6.17e-12,39;UBERON:0003076,2.15e-11,12;UBERON:0003057,2.15e-11,12;UBERON:0000956,1.38e-09,21;UBERON:0001869,1.38e-09,21;UBERON:0000203,1.38e-09,21;UBERON:0003056,3.01e-09,49;UBERON:0002021,3.41e-08,10;UBERON:0000411,3.41e-08,10;UBERON:0001950,3.41e-08,10;UBERON:0003103,4.78e-08,43;UBERON:0002619,8.35e-08,17;UBERON:0002240,8.45e-08,6;UBERON:0005174,8.45e-08,6;UBERON:0001137,8.45e-08,6;UBERON:0007100,3.42e-07,18;UBERON:0000948,3.42e-07,18;UBERON:0005498,3.42e-07,18;UBERON:0004140,3.42e-07,18;UBERON:0009881,3.42e-07,18;UBERON:0004141,3.42e-07,18;UBERON:0003084,3.42e-07,18;UBERON:0007005,3.42e-07,18;UBERON:0004139,3.42e-07,18;UBERON:0004291,3.42e-07,18|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0,0,0.129123323441576,0,0,0,0.319088635981346,0,0,0.333109761815663,0,0.699561878128147,0.630924330716475,0.137114433605739,0.42438965179803,1.9559956734746,0.0992909512008853,0.522399578277871,0,0.68822784320151,0,0,0,0,0.252030129759931,0,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0.683045484958446,0,0.251793635951155,0.202753862439029,0.183546752161682,0.782391344348039,1.30815093828268,0.439372365468944,0.972149495371417,1.25987779462826,0,0,0,0,0.257259436035947,0,0.515672092277442,1.21389876515759,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0.311068836925433,1.89008313664367,1.05162480675691,2.28520787523043,2.20868540951614,0.857435594504678,1.15014565221884,0,1.10115880999389,3.95830748064082,3.99376986466233,0.923204014111357,1.55528994124096,0.52091337055676,2.79182999001381,4.50210088025344,3.66715794664344,2.06240009831567,2.84743361598206,3.54158947068071,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0.702222100658759,0.170430322578058,1.03914401841148,0.35333957451034,0.281686839553361,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0.593768556259299,0.346970653532272,0,0.461230994512117,0.301445281105245,0.587943535678524,0.879666139307728,0.247194967734374,0.578397427679647,0,0.970601099684455,0.220841518460394,0.484875253135222,0,2.04946557908083,2.72280718857492,0.510914110417183,0.11981512450592,0,0,3.89455662452539,6.8625090422794,6.15706325353036,4.51943232499919,3.3243009452943,4.57133698031032,4.05603157669394,0.81471491080253,0.248813941220186,1.51633655060205,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0.544291993210623,0.12811372028485,0.187403449119458,0.517406741478031,0.215567992932842,0.567318240503458,0.703804496655795,1.31517439456545,0.556094498451196,0,0.205782136407943,0.995171334092466,0,0,0,1.65700618028402,0.469052119962192,1.08037236876609,0.710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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22340 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P49766 | |||
|association_with_transcript=94bp_to_ENSMUST00000130048_5end | |||
|cluster_id=chr19:7062011..7062024,- | |||
|description=CAGE_peak_4_at_Vegfb_5end | |||
|id=chr19:7062011..7062024,- | |||
|ontology_enrichment_celltype=CL:0000117!3.60e-08!23;CL:0000337!3.60e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.25e-12,23;CL:0000337,9.25e-12,23;CL:0000540,1.15e-07,33;CL:0000047,1.15e-07,33;CL:0000031,1.15e-07,33;CL:0000404,1.15e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-17!52;UBERON:0005068!3.00e-17!52;UBERON:0006241!3.00e-17!52;UBERON:0007135!3.00e-17!52;UBERON:0000955!4.18e-16!50;UBERON:0006238!4.18e-16!50;UBERON:0002616!1.45e-15!49;UBERON:0001017!7.19e-15!73;UBERON:0005743!7.19e-15!73;UBERON:0000073!7.93e-14!75;UBERON:0001016!7.93e-14!75;UBERON:0002020!1.93e-13!34;UBERON:0000033!5.56e-13!63;UBERON:0004121!1.36e-11!102;UBERON:0000924!1.36e-11!102;UBERON:0006601!1.36e-11!102;UBERON:0004111!1.70e-11!122;UBERON:0003080!3.07e-11!40;UBERON:0002791!9.07e-11!29;UBERON:0003528!9.07e-11!29;UBERON:0001893!9.07e-11!29;UBERON:0002780!1.18e-10!39;UBERON:0001890!1.18e-10!39;UBERON:0006240!1.18e-10!39;UBERON:0002346!1.51e-10!71;UBERON:0003075!1.51e-10!71;UBERON:0007284!1.51e-10!71;UBERON:0000025!2.14e-10!114;UBERON:0003056!7.04e-08!49;UBERON:0007811!1.96e-07!86;UBERON:0003076!3.28e-07!12;UBERON:0003057!3.28e-07!12;UBERON:0000956!3.81e-07!21;UBERON:0001869!3.81e-07!21;UBERON:0000203!3.81e-07!21;UBERON:0000153!4.43e-07!94;UBERON:0003103!8.22e-07!43;UBERON:0000477!8.84e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.79e-24,54;UBERON:0001049,1.80e-22,52;UBERON:0005068,1.80e-22,52;UBERON:0006241,1.80e-22,52;UBERON:0007135,1.80e-22,52;UBERON:0001017,5.01e-22,73;UBERON:0001016,4.32e-21,75;UBERON:0010314,2.40e-20,92;UBERON:0002020,1.89e-19,34;UBERON:0000955,1.40e-17,47;UBERON:0006238,1.40e-17,47;UBERON:0002616,1.14e-16,46;UBERON:0002346,3.26e-16,64;UBERON:0003075,3.26e-16,64;UBERON:0007284,3.26e-16,64;UBERON:0004121,4.92e-16,95;UBERON:0000924,4.92e-16,95;UBERON:0006601,4.92e-16,95;UBERON:0004111,2.18e-15,122;UBERON:0010371,8.00e-15,73;UBERON:0000025,1.11e-14,114;UBERON:0003528,1.76e-14,29;UBERON:0002791,1.76e-14,29;UBERON:0001893,1.76e-14,29;UBERON:0003080,6.56e-13,40;UBERON:0002780,6.17e-12,39;UBERON:0001890,6.17e-12,39;UBERON:0006240,6.17e-12,39;UBERON:0003076,2.15e-11,12;UBERON:0003057,2.15e-11,12;UBERON:0000956,1.38e-09,21;UBERON:0001869,1.38e-09,21;UBERON:0000203,1.38e-09,21;UBERON:0003056,3.01e-09,49;UBERON:0002021,3.41e-08,10;UBERON:0000411,3.41e-08,10;UBERON:0001950,3.41e-08,10;UBERON:0003103,4.78e-08,43;UBERON:0002619,8.35e-08,17;UBERON:0002240,8.45e-08,6;UBERON:0005174,8.45e-08,6;UBERON:0001137,8.45e-08,6;UBERON:0007100,3.42e-07,18;UBERON:0000948,3.42e-07,18;UBERON:0005498,3.42e-07,18;UBERON:0004140,3.42e-07,18;UBERON:0009881,3.42e-07,18;UBERON:0004141,3.42e-07,18;UBERON:0003084,3.42e-07,18;UBERON:0007005,3.42e-07,18;UBERON:0004139,3.42e-07,18;UBERON:0004291,3.42e-07,18 | |||
|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0,0,0.129123323441576,0,0,0,0.319088635981346,0,0,0.333109761815663,0,0.699561878128147,0.630924330716475,0.137114433605739,0.42438965179803,1.9559956734746,0.0992909512008853,0.522399578277871,0,0.68822784320151,0,0,0,0,0.252030129759931,0,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0.683045484958446,0,0.251793635951155,0.202753862439029,0.183546752161682,0.782391344348039,1.30815093828268,0.439372365468944,0.972149495371417,1.25987779462826,0,0,0,0,0.257259436035947,0,0.515672092277442,1.21389876515759,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0.311068836925433,1.89008313664367,1.05162480675691,2.28520787523043,2.20868540951614,0.857435594504678,1.15014565221884,0,1.10115880999389,3.95830748064082,3.99376986466233,0.923204014111357,1.55528994124096,0.52091337055676,2.79182999001381,4.50210088025344,3.66715794664344,2.06240009831567,2.84743361598206,3.54158947068071,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0.702222100658759,0.170430322578058,1.03914401841148,0.35333957451034,0.281686839553361,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0.593768556259299,0.346970653532272,0,0.461230994512117,0.301445281105245,0.587943535678524,0.879666139307728,0.247194967734374,0.578397427679647,0,0.970601099684455,0.220841518460394,0.484875253135222,0,2.04946557908083,2.72280718857492,0.510914110417183,0.11981512450592,0,0,3.89455662452539,6.8625090422794,6.15706325353036,4.51943232499919,3.3243009452943,4.57133698031032,4.05603157669394,0.81471491080253,0.248813941220186,1.51633655060205,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0.544291993210623,0.12811372028485,0.187403449119458,0.517406741478031,0.215567992932842,0.567318240503458,0.703804496655795,1.31517439456545,0.556094498451196,0,0.205782136407943,0.995171334092466,0,0,0,1.65700618028402,0.469052119962192,1.08037236876609,0.710234206755631,1.18058539048442,1.54267112887378,1.39520366850245,2.95100741539581,0.700592054203017,1.97471819896177,2.46251196118643,2.99954595319666,3.21639972335731,1.97595103761946,2.41571553768669,4.6263788684108,2.77842453424068,0.330418782983798,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0.58489226135736,0,0.432276099749388,0.199141273254367,0.379335801906163,0.228497025219458,1.1270773567308,0,0.387904974335251,0.561086559122548,0.442655759869801,1.32849133181642,0.627994911365499,0.493588655687202,0,0,0,0,0.202860121388503,0,0.763877555344259,0,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0.538192240565737,0,0.184753190166605,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,0.837531287209079,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.318909537314974,0,0.690739927463582,0.578596234326046,0,0,0.491764273019036,1.65562047782839,3.37156238974363,2.69586879162067,0.819674726883377,0.504941854408746,0,0,0,0.955875191810208,0,0.849229592366497,0,0,0,2.57057053137446,0.709700426041343,0.712262414669021,0.651547837414304,0.494910368917606,0,0,0,0.565815239267694,0.295301892880773,0.922305443831782,0.775284879504663,1.09060118843252,0.356497378384721,0.632073515871632,0,1.03135543248187,0.340439605753788,0.36012218806262,0.388076051348264,0.643011105094777,0.709360934569094,0.178368817602071,0.987294123612726,0.304464949114599,0.23467170806371,0,0.441056796109924,0.32977250588296,0.645857706783622,0.542816324353403,0.716234064018819,0.328281799490123,0.291480836629851,2.78137953015765,0.341741761595705,0.619160603889667,0,0,0,0.457556346413045,0,0.279902904647316,0.414599921413271,0,0.316335993581135,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.495920734352016,0.26175594198403,0.388844919875379,3.10669656543463,0,0.897099276263873,0.165458490457098,0.583353565032143,0.516639293910924,0.168956125490778,0.352071715937262,0.2604087696879,0,0,0,0,1.01362607645082,0.410843828659309,0.909445760844565,0.716106782669926,0.79472541912506,0.480781798079875,0.443068581523732,0.302899349844443,0.533447646584999,0.403304740547362,0,0.481059208201647,0,0.906921534460845,0,0.179427713218951,0.335769232728157,0.579568782096571,0,0.183151624267265,0.214368379079066,1.50471631210609,0.564751842617067,0.460325236507177,2.29158205375759,2.749650917499,4.7955776383945,3.0215755895588,3.37511250115903,3.15224842256954,3.62513927187364,2.5888015587591,0.830298780673413,0.399024873401031,0.682934423016537,1.21553358534147,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,1.51618327058278,0.50695859978048,0.188626341386076,0.936415074698824,0.704276676453562,0.689225627467359,1.90517476513229,0.579421629724277,1.35036454324594,0.824171801606613,0.441596760403192,0.342869252385415,1.24233064311536,0.238436189947321,0.87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| |||
|short_description=p4@Vegfb | |||
}} |
Revision as of 12:59, 4 August 2015
Short description: | p4@Vegfb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Vegfb_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 94bp_to_ENSMUST00000130048_5end |
EntrezGene: | 22340 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.25e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.25e-12 | 23 |
neuron | 1.15e-07 | 33 |
neuronal stem cell | 1.15e-07 | 33 |
neuroblast | 1.15e-07 | 33 |
electrically signaling cell | 1.15e-07 | 33 |