FFCP PHASE1:Mm9::chr17:27792517..27792567,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=23969|HGNC=|MCL_coexpression_id=1|UniProt=Q61644|association_with_transcript=0bp_to_ENSMUST00000045896_5end|description=CAGE_peak_1_at_Pacsin1_5end|id=chr17:27792517..27792567,+|ontology_enrichment_celltype=CL:0000117!8.31e-10!23;CL:0000337!8.31e-10!23;CL:0000540!1.67e-09!33;CL:0000047!1.67e-09!33;CL:0000031!1.67e-09!33;CL:0000404!1.67e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-10,23;CL:0000337,1.26e-10,23;CL:0000540,4.23e-10,33;CL:0000047,4.23e-10,33;CL:0000031,4.23e-10,33;CL:0000404,4.23e-10,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!8.95e-26!86;UBERON:0000153!2.40e-24!94;UBERON:0000033!4.94e-21!63;UBERON:0001017!4.12e-20!73;UBERON:0005743!4.12e-20!73;UBERON:0000073!8.77e-20!75;UBERON:0001016!8.77e-20!75;UBERON:0002346!1.26e-19!71;UBERON:0003075!1.26e-19!71;UBERON:0007284!1.26e-19!71;UBERON:0001049!2.26e-19!52;UBERON:0005068!2.26e-19!52;UBERON:0006241!2.26e-19!52;UBERON:0007135!2.26e-19!52;UBERON:0000955!6.53e-19!50;UBERON:0006238!6.53e-19!50;UBERON:0002616!3.45e-18!49;UBERON:0004121!1.12e-17!102;UBERON:0000924!1.12e-17!102;UBERON:0006601!1.12e-17!102;UBERON:0003056!2.29e-16!49;UBERON:0003080!4.83e-15!40;UBERON:0002780!1.98e-14!39;UBERON:0001890!1.98e-14!39;UBERON:0006240!1.98e-14!39;UBERON:0002020!8.74e-14!34;UBERON:0002791!2.11e-11!29;UBERON:0003528!2.11e-11!29;UBERON:0001893!2.11e-11!29;UBERON:0000956!9.84e-08!21;UBERON:0001869!9.84e-08!21;UBERON:0000203!9.84e-08!21;UBERON:0002021!2.09e-07!10;UBERON:0000411!2.09e-07!10;UBERON:0001950!2.09e-07!10;UBERON:0002619!4.74e-07!17;UBERON:0000064!5.10e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-22,64;UBERON:0003075,1.04e-22,64;UBERON:0007284,1.04e-22,64;UBERON:0000073,2.01e-22,54;UBERON:0001017,7.20e-22,73;UBERON:0001016,3.67e-21,75;UBERON:0001049,7.03e-21,52;UBERON:0005068,7.03e-21,52;UBERON:0006241,7.03e-21,52;UBERON:0007135,7.03e-21,52;UBERON:0004121,2.00e-19,95;UBERON:0000924,2.00e-19,95;UBERON:0006601,2.00e-19,95;UBERON:0010371,3.19e-19,73;UBERON:0000955,3.84e-18,47;UBERON:0006238,3.84e-18,47;UBERON:0003056,1.22e-17,49;UBERON:0002616,2.25e-17,46;UBERON:0003080,3.57e-16,40;UBERON:0002780,1.67e-15,39;UBERON:0001890,1.67e-15,39;UBERON:0006240,1.67e-15,39;UBERON:0002020,8.71e-15,34;UBERON:0010314,1.50e-12,92;UBERON:0003528,3.57e-12,29;UBERON:0002791,3.57e-12,29;UBERON:0001893,3.57e-12,29;UBERON:0000956,3.70e-08,21;UBERON:0001869,3.70e-08,21;UBERON:0000203,3.70e-08,21;UBERON:0002021,5.46e-08,10;UBERON:0000411,5.46e-08,10;UBERON:0001950,5.46e-08,10;UBERON:0002619,2.12e-07,17;UBERON:0007811,3.01e-07,36|phase1_expression=12.9720566154883,0,0,0,0,0.671517087647559,0.233612640595526,53.5861792282542,16.6130692138967,37.450324211519,21.5734639964136,25.0484579245356,42.1153795630766,37.5033526377499,4.99664642723494,5.06188168474565,2.09868563438444,18.2968055907778,18.2362196695633,15.7024171165271,36.8237446354132,7.24823943766463,3.6567970479451,2.71987118748791,3.44113921600755,0,0,0,0,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0,0,16.7782606057736,39.8949178106239,29.5762543245368,0,0,0,10.5204559646991,12.1667925232568,8.87363964908651,0,0,0.449949858640699,0,0.7104801149461,0.898800331555214,0,3.00699875694585,3.37514845829227,2.52389953621658,53.7023850679151,37.5476519617743,4.16468717330844,5.75072826109418,10.1114066527102,211.422491518826,194.084753889485,183.559807241211,10.2871304429551,11.8019060247108,10.4182674111352,198.21992929098,117.617385496621,150.353475812381,33.5876587439981,36.7318936461686,14.911955666024,0.757261933331841,2.26714680320357,0,0,0,2.15881276655127,0,0,8.70755404816862,0,0,0,8.59144860637751,1.28326477414318,0,0,0,0,0,5.709193985953,12.6879562987114,5.78924342352817,1.38788261412909,0.913396434936424,1.15307748628029,0.60289056221049,1.17588707135705,1.0053327306374,0.247194967734374,0.722996784599558,0.884610551949874,2.26473589926373,2.42925670306433,2.42437626567611,1.86391761218122,203.189873126014,198.764924765969,0.510914110417183,0.239630249011841,0,0.254140454146129,178.250860891739,156.46520616397,23.4973638451056,185.296725324967,188.206576595123,167.269375870446,155.751612545047,0,4.35424397135326,15.6688110228878,32.6184876624035,1.30120442962704,1.37941262660084,1.26043490863744,3.76762044589288,6.19132142277083,5.89323113310309,8.80796210861451,76.3174943680096,1.07783996466421,2.08016688184601,2.46331573829528,1.53437012699302,1.11218899690239,0,0.411564272815887,0.59710280045548,0,0,0,1.24275463521301,1.64168241986767,0.720248245844059,0.473489471170421,0.196764231747404,0,0,0,0.116765342367169,0,0,0.243206428637567,0,1.3173006917463,0.805238512562231,127.225418881297,10.2904612379284,0.991256348951394,0.528901133327089,0.426576501070468,1.16118335930219,0.902072229254653,0.605050573870028,0.667134131534611,0.951128130562796,0.474529061544512,0.988193728344065,0.754005626400808,0.994782360205754,1.16978452271472,0.898819408654221,0.648414149624083,1.39398891278057,0.758671603812327,0.114248512609729,0,0.610953983535943,0.193952487167626,0.210407459670956,0.569128834118316,0.295220295959204,0.627994911365499,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.324270453550071,0,1.43768206527355,2.23284568601102,0.312037673114561,0.252578877947112,0,0.964887042726734,2.03228509183265,0.37898282354097,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.664394068946325,0.956728611944923,2.13022309130459,1.72684981865896,1.3018415272336,0,0,0.983528546038072,3.31124095565679,198.440529224911,198.908232146969,0,0.504941854408746,1.57754109708128,1.95219372148319,10.3403230911743,0.477937595905104,1.55959071857676,1.41538265394416,2.02405350837447,3.79932615284705,3.95287777946523,219.783780432516,1.13552068166615,0,0,1.64970122972535,3.98235415019888,1.45668381692989,0.302323556964751,0.377210159511796,0,0.922305443831782,0.516856586336442,1.09060118843252,2.13898427030833,2.21225730555071,1.05418608574999,1.03135543248187,43.9167091422387,1.62054984628179,4.52755393239641,6.85878512101095,6.91626911204867,6.24290861607247,7.40470592709544,6.39376393140658,1.40803024838226,0.42366414172764,1.54369878638473,0.49465875882444,0.161464426695906,0.241251699712623,0,0,1.45740418314925,190.431785164793,6.83483523191411,0.206386867963223,1.29636169158798,1.88368457004691,7.65487675237741,8.23601423543482,0.509935289981566,0.419854356970974,1.52019971184866,0.954670618015114,0,0.203319467126849,0.756037385752609,0.627264888043406,0.655087691238533,0.674321731924103,1.07449492442937,0.26175594198403,1.03691978633434,2.4853572523477,0,0,0,0.388902376688095,0.387479470433193,0.168956125490778,0.352071715937262,1.0416350787516,1.57289016638566,0.241584120826006,0.288030006257865,15.4845449107807,0.405450430580328,0.821687657318618,1.29920822977795,3.04345382634718,7.74857283646933,16.8273629327956,14.1781946087594,13.8324036428962,11.43102099825,17.9470609543576,22.9026019738418,19.8196393779079,21.7391038057718,1.58711268530648,0.443971906748129,1.34570784914214,0.335769232728157,0.772758376128762,0,0.183151624267265,0.643105137237198,0,157.001012247545,136.256270006124,139.786505279213,131.639537675265,174.010960021743,191.114656039594,155.930197553547,183.280729712258,182.16324841165,204.515323141969,1.97195960409936,2.79317411380722,2.73173769206615,0.972426868273176,2.30574478890781,4.22840069435032,3.33370091702423,3.91466608753899,3.53011130550997,4.04315538822076,2.28131369901216,2.07488975524684,3.46473577638565,2.81710670581425,3.27382173046996,4.76293691283074,3.24476112645595,2.89363830695558,2.47251540481984,3.09117732282234,3.77156177623957,3.72699192934609,3.33810665926249,2.32554266611726,3.19971893412124,3.21535509988371,3.84148743032822,2.36762740294059,3.12349461845482,2.80571135828869,4.1522256343461,2.75812550651578,2.86461730218783,2.47898945897546,2.89359916471712,7.24450676020043,2.33931608445408,2.79332370262788,3.44318997723918,3.52946270591225,3.70988536992674|short_description=p1@Pacsin1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:23969 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61644 | |||
|association_with_transcript=0bp_to_ENSMUST00000045896_5end | |||
|cluster_id=chr17:27792517..27792567,+ | |||
|description=CAGE_peak_1_at_Pacsin1_5end | |||
|id=chr17:27792517..27792567,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.31e-10!23;CL:0000337!8.31e-10!23;CL:0000540!1.67e-09!33;CL:0000047!1.67e-09!33;CL:0000031!1.67e-09!33;CL:0000404!1.67e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-10,23;CL:0000337,1.26e-10,23;CL:0000540,4.23e-10,33;CL:0000047,4.23e-10,33;CL:0000031,4.23e-10,33;CL:0000404,4.23e-10,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!8.95e-26!86;UBERON:0000153!2.40e-24!94;UBERON:0000033!4.94e-21!63;UBERON:0001017!4.12e-20!73;UBERON:0005743!4.12e-20!73;UBERON:0000073!8.77e-20!75;UBERON:0001016!8.77e-20!75;UBERON:0002346!1.26e-19!71;UBERON:0003075!1.26e-19!71;UBERON:0007284!1.26e-19!71;UBERON:0001049!2.26e-19!52;UBERON:0005068!2.26e-19!52;UBERON:0006241!2.26e-19!52;UBERON:0007135!2.26e-19!52;UBERON:0000955!6.53e-19!50;UBERON:0006238!6.53e-19!50;UBERON:0002616!3.45e-18!49;UBERON:0004121!1.12e-17!102;UBERON:0000924!1.12e-17!102;UBERON:0006601!1.12e-17!102;UBERON:0003056!2.29e-16!49;UBERON:0003080!4.83e-15!40;UBERON:0002780!1.98e-14!39;UBERON:0001890!1.98e-14!39;UBERON:0006240!1.98e-14!39;UBERON:0002020!8.74e-14!34;UBERON:0002791!2.11e-11!29;UBERON:0003528!2.11e-11!29;UBERON:0001893!2.11e-11!29;UBERON:0000956!9.84e-08!21;UBERON:0001869!9.84e-08!21;UBERON:0000203!9.84e-08!21;UBERON:0002021!2.09e-07!10;UBERON:0000411!2.09e-07!10;UBERON:0001950!2.09e-07!10;UBERON:0002619!4.74e-07!17;UBERON:0000064!5.10e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-22,64;UBERON:0003075,1.04e-22,64;UBERON:0007284,1.04e-22,64;UBERON:0000073,2.01e-22,54;UBERON:0001017,7.20e-22,73;UBERON:0001016,3.67e-21,75;UBERON:0001049,7.03e-21,52;UBERON:0005068,7.03e-21,52;UBERON:0006241,7.03e-21,52;UBERON:0007135,7.03e-21,52;UBERON:0004121,2.00e-19,95;UBERON:0000924,2.00e-19,95;UBERON:0006601,2.00e-19,95;UBERON:0010371,3.19e-19,73;UBERON:0000955,3.84e-18,47;UBERON:0006238,3.84e-18,47;UBERON:0003056,1.22e-17,49;UBERON:0002616,2.25e-17,46;UBERON:0003080,3.57e-16,40;UBERON:0002780,1.67e-15,39;UBERON:0001890,1.67e-15,39;UBERON:0006240,1.67e-15,39;UBERON:0002020,8.71e-15,34;UBERON:0010314,1.50e-12,92;UBERON:0003528,3.57e-12,29;UBERON:0002791,3.57e-12,29;UBERON:0001893,3.57e-12,29;UBERON:0000956,3.70e-08,21;UBERON:0001869,3.70e-08,21;UBERON:0000203,3.70e-08,21;UBERON:0002021,5.46e-08,10;UBERON:0000411,5.46e-08,10;UBERON:0001950,5.46e-08,10;UBERON:0002619,2.12e-07,17;UBERON:0007811,3.01e-07,36 | |||
|phase1_expression=12.9720566154883,0,0,0,0,0.671517087647559,0.233612640595526,53.5861792282542,16.6130692138967,37.450324211519,21.5734639964136,25.0484579245356,42.1153795630766,37.5033526377499,4.99664642723494,5.06188168474565,2.09868563438444,18.2968055907778,18.2362196695633,15.7024171165271,36.8237446354132,7.24823943766463,3.6567970479451,2.71987118748791,3.44113921600755,0,0,0,0,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0,0,16.7782606057736,39.8949178106239,29.5762543245368,0,0,0,10.5204559646991,12.1667925232568,8.87363964908651,0,0,0.449949858640699,0,0.7104801149461,0.898800331555214,0,3.00699875694585,3.37514845829227,2.52389953621658,53.7023850679151,37.5476519617743,4.16468717330844,5.75072826109418,10.1114066527102,211.422491518826,194.084753889485,183.559807241211,10.2871304429551,11.8019060247108,10.4182674111352,198.21992929098,117.617385496621,150.353475812381,33.5876587439981,36.7318936461686,14.911955666024,0.757261933331841,2.26714680320357,0,0,0,2.15881276655127,0,0,8.70755404816862,0,0,0,8.59144860637751,1.28326477414318,0,0,0,0,0,5.709193985953,12.6879562987114,5.78924342352817,1.38788261412909,0.913396434936424,1.15307748628029,0.60289056221049,1.17588707135705,1.0053327306374,0.247194967734374,0.722996784599558,0.884610551949874,2.26473589926373,2.42925670306433,2.42437626567611,1.86391761218122,203.189873126014,198.764924765969,0.510914110417183,0.239630249011841,0,0.254140454146129,178.250860891739,156.46520616397,23.4973638451056,185.296725324967,188.206576595123,167.269375870446,155.751612545047,0,4.35424397135326,15.6688110228878,32.6184876624035,1.30120442962704,1.37941262660084,1.26043490863744,3.76762044589288,6.19132142277083,5.89323113310309,8.80796210861451,76.3174943680096,1.07783996466421,2.08016688184601,2.46331573829528,1.53437012699302,1.11218899690239,0,0.411564272815887,0.59710280045548,0,0,0,1.24275463521301,1.64168241986767,0.720248245844059,0.473489471170421,0.196764231747404,0,0,0,0.116765342367169,0,0,0.243206428637567,0,1.3173006917463,0.805238512562231,127.225418881297,10.2904612379284,0.991256348951394,0.528901133327089,0.426576501070468,1.16118335930219,0.902072229254653,0.605050573870028,0.667134131534611,0.951128130562796,0.474529061544512,0.988193728344065,0.754005626400808,0.994782360205754,1.16978452271472,0.898819408654221,0.648414149624083,1.39398891278057,0.758671603812327,0.114248512609729,0,0.610953983535943,0.193952487167626,0.210407459670956,0.569128834118316,0.295220295959204,0.627994911365499,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.324270453550071,0,1.43768206527355,2.23284568601102,0.312037673114561,0.252578877947112,0,0.964887042726734,2.03228509183265,0.37898282354097,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.664394068946325,0.956728611944923,2.13022309130459,1.72684981865896,1.3018415272336,0,0,0.983528546038072,3.31124095565679,198.440529224911,198.908232146969,0,0.504941854408746,1.57754109708128,1.95219372148319,10.3403230911743,0.477937595905104,1.55959071857676,1.41538265394416,2.02405350837447,3.79932615284705,3.95287777946523,219.783780432516,1.13552068166615,0,0,1.64970122972535,3.98235415019888,1.45668381692989,0.302323556964751,0.377210159511796,0,0.922305443831782,0.516856586336442,1.09060118843252,2.13898427030833,2.21225730555071,1.05418608574999,1.03135543248187,43.9167091422387,1.62054984628179,4.52755393239641,6.85878512101095,6.91626911204867,6.24290861607247,7.40470592709544,6.39376393140658,1.40803024838226,0.42366414172764,1.54369878638473,0.49465875882444,0.161464426695906,0.241251699712623,0,0,1.45740418314925,190.431785164793,6.83483523191411,0.206386867963223,1.29636169158798,1.88368457004691,7.65487675237741,8.23601423543482,0.509935289981566,0.419854356970974,1.52019971184866,0.954670618015114,0,0.203319467126849,0.756037385752609,0.627264888043406,0.655087691238533,0.674321731924103,1.07449492442937,0.26175594198403,1.03691978633434,2.4853572523477,0,0,0,0.388902376688095,0.387479470433193,0.168956125490778,0.352071715937262,1.0416350787516,1.57289016638566,0.241584120826006,0.288030006257865,15.4845449107807,0.405450430580328,0.821687657318618,1.29920822977795,3.04345382634718,7.74857283646933,16.8273629327956,14.1781946087594,13.8324036428962,11.43102099825,17.9470609543576,22.9026019738418,19.8196393779079,21.7391038057718,1.58711268530648,0.443971906748129,1.34570784914214,0.335769232728157,0.772758376128762,0,0.183151624267265,0.643105137237198,0,157.001012247545,136.256270006124,139.786505279213,131.639537675265,174.010960021743,191.114656039594,155.930197553547,183.280729712258,182.16324841165,204.515323141969,1.97195960409936,2.79317411380722,2.73173769206615,0.972426868273176,2.30574478890781,4.22840069435032,3.33370091702423,3.91466608753899,3.53011130550997,4.04315538822076,2.28131369901216,2.07488975524684,3.46473577638565,2.81710670581425,3.27382173046996,4.76293691283074,3.24476112645595,2.89363830695558,2.47251540481984,3.09117732282234,3.77156177623957,3.72699192934609,3.33810665926249,2.32554266611726,3.19971893412124,3.21535509988371,3.84148743032822,2.36762740294059,3.12349461845482,2.80571135828869,4.1522256343461,2.75812550651578,2.86461730218783,2.47898945897546,2.89359916471712,7.24450676020043,2.33931608445408,2.79332370262788,3.44318997723918,3.52946270591225,3.70988536992674 | |||
|short_description=p1@Pacsin1 | |||
}} |
Revision as of 12:32, 4 August 2015
Short description: | p1@Pacsin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pacsin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000045896_5end |
EntrezGene: | 23969 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.26e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-10 | 23 |
neuron | 4.23e-10 | 33 |
neuronal stem cell | 4.23e-10 | 33 |
neuroblast | 4.23e-10 | 33 |
electrically signaling cell | 4.23e-10 | 33 |