FFCP PHASE1:Mm9::chr17:27089806..27089823,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=93 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27089806..27089823,+ | |||
|description=CAGE_peak_at_chr17:27089806..27089823,+ | |description=CAGE_peak_at_chr17:27089806..27089823,+ | ||
|id=chr17:27089806..27089823,+ | |id=chr17:27089806..27089823,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,6.43e-08,3;CL:0000765,6.43e-08,3;CL:0000038,6.43e-08,3;CL:0000547,6.43e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,6.43e-08,3;DOID:0060083,6.43e-08,3;DOID:1240,6.43e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003080!1.27e-16!40;UBERON:0000955!1.62e-16!50;UBERON:0006238!1.62e-16!50;UBERON:0002020!6.60e-16!34;UBERON:0002780!1.21e-15!39;UBERON:0001890!1.21e-15!39;UBERON:0006240!1.21e-15!39;UBERON:0002616!1.90e-15!49;UBERON:0001049!2.74e-15!52;UBERON:0005068!2.74e-15!52;UBERON:0006241!2.74e-15!52;UBERON:0007135!2.74e-15!52;UBERON:0002791!9.60e-15!29;UBERON:0003528!9.60e-15!29;UBERON:0001893!9.60e-15!29;UBERON:0002021!1.45e-14!10;UBERON:0000411!1.45e-14!10;UBERON:0001950!1.45e-14!10;UBERON:0003056!5.92e-13!49;UBERON:0002619!3.83e-12!17;UBERON:0000033!5.77e-12!63;UBERON:0000073!3.71e-11!75;UBERON:0001016!3.71e-11!75;UBERON:0001017!5.52e-11!73;UBERON:0005743!5.52e-11!73;UBERON:0000956!9.65e-11!21;UBERON:0001869!9.65e-11!21;UBERON:0000203!9.65e-11!21;UBERON:0002346!2.47e-10!71;UBERON:0003075!2.47e-10!71;UBERON:0007284!2.47e-10!71;UBERON:0000153!2.10e-07!94;UBERON:0007811!5.83e-07!86;UBERON:0004121!8.23e-07!102;UBERON:0000924!8.23e-07!102;UBERON:0006601!8.23e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.33e-55,10;UBERON:0000411,3.33e-55,10;UBERON:0001950,3.33e-55,10;UBERON:0002619,4.91e-32,17;UBERON:0000956,5.22e-31,21;UBERON:0001869,5.22e-31,21;UBERON:0000203,5.22e-31,21;UBERON:0003528,4.31e-22,29;UBERON:0002791,4.31e-22,29;UBERON:0001893,4.31e-22,29;UBERON:0002020,1.21e-18,34;UBERON:0002780,4.50e-16,39;UBERON:0001890,4.50e-16,39;UBERON:0006240,4.50e-16,39;UBERON:0000955,8.35e-16,47;UBERON:0006238,8.35e-16,47;UBERON:0003080,1.23e-15,40;UBERON:0002616,2.07e-13,46;UBERON:0000073,2.28e-13,54;UBERON:0003056,1.68e-12,49;UBERON:0001049,1.08e-11,52;UBERON:0005068,1.08e-11,52;UBERON:0006241,1.08e-11,52;UBERON:0007135,1.08e-11,52;UBERON:0001017,2.40e-11,73;UBERON:0001016,5.36e-11,75;UBERON:0002346,3.20e-09,64;UBERON:0003075,3.20e-09,64;UBERON:0007284,3.20e-09,64;UBERON:0004121,2.66e-08,95;UBERON:0000924,2.66e-08,95;UBERON:0006601,2.66e-08,95;UBERON:0010371,6.76e-08,73 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,2.54012269383853,1.23012957516914,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0,0,0,1.0214987046815,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.279182999001381,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,0.251308704225729,6.08385120672968,6.13717097592793,0.41557608911912,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.316182685621286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,35.024023489977,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1655331671072,9.20650473014354,15.4681788628637,17.1853182343688,15.7568979547248,17.3740596399631,9.45031500324528,10.3573876741571,14.9536994964788,11.39072685854,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,2.54012269383853,1.23012957516914,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0,0,0,1.0214987046815,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.279182999001381,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,0.251308704225729,6.08385120672968,6.13717097592793,0.41557608911912,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.316182685621286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,35.024023489977,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1655331671072,9.20650473014354,15.4681788628637,17.1853182343688,15.7568979547248,17.3740596399631,9.45031500324528,10.3573876741571,14.9536994964788,11.39072685854,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr17:27089806..27089823,+ | |short_description=p@chr17:27089806..27089823,+ | ||
}} | }} |
Latest revision as of 12:05, 4 August 2015
Short description: | p@chr17:27089806..27089823, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:27089806..27089823, + |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 6.43e-08 | 3 |
erythroblast | 6.43e-08 | 3 |
erythroid progenitor cell | 6.43e-08 | 3 |
proerythroblast | 6.43e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.33e-55 | 10 |
visual cortex | 3.33e-55 | 10 |
neocortex | 3.33e-55 | 10 |
regional part of cerebral cortex | 4.91e-32 | 17 |
cerebral cortex | 5.22e-31 | 21 |
cerebral hemisphere | 5.22e-31 | 21 |
pallium | 5.22e-31 | 21 |
brain grey matter | 4.31e-22 | 29 |
regional part of telencephalon | 4.31e-22 | 29 |
telencephalon | 4.31e-22 | 29 |
gray matter | 1.21e-18 | 34 |
regional part of forebrain | 4.50e-16 | 39 |
forebrain | 4.50e-16 | 39 |
future forebrain | 4.50e-16 | 39 |
brain | 8.35e-16 | 47 |
future brain | 8.35e-16 | 47 |
anterior neural tube | 1.23e-15 | 40 |
regional part of brain | 2.07e-13 | 46 |
regional part of nervous system | 2.28e-13 | 54 |
pre-chordal neural plate | 1.68e-12 | 49 |
neural tube | 1.08e-11 | 52 |
neural rod | 1.08e-11 | 52 |
future spinal cord | 1.08e-11 | 52 |
neural keel | 1.08e-11 | 52 |
central nervous system | 2.40e-11 | 73 |
nervous system | 5.36e-11 | 75 |
neurectoderm | 3.20e-09 | 64 |
neural plate | 3.20e-09 | 64 |
presumptive neural plate | 3.20e-09 | 64 |
ectoderm-derived structure | 2.66e-08 | 95 |
ectoderm | 2.66e-08 | 95 |
presumptive ectoderm | 2.66e-08 | 95 |
ecto-epithelium | 6.76e-08 | 73 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.43e-08 | 3 |
immune system cancer | 6.43e-08 | 3 |
leukemia | 6.43e-08 | 3 |