FFCP PHASE1:Mm9::chr17:27078365..27078409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=295 | |MCL_coexpression_id=295 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27078365..27078409,+ | |||
|description=CAGE_peak_at_chr17:27078365..27078409,+ | |description=CAGE_peak_at_chr17:27078365..27078409,+ | ||
|id=chr17:27078365..27078409,+ | |id=chr17:27078365..27078409,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.17e-12!33;CL:0000047!3.17e-12!33;CL:0000031!3.17e-12!33;CL:0000404!3.17e-12!33;CL:0000117!1.15e-11!23;CL:0000337!1.15e-11!23;CL:0000393!3.22e-11!39;CL:0000211!3.22e-11!39;CL:0002319!2.13e-09!43;CL:0000221!3.42e-09!44;CL:0000133!3.42e-09!44;CL:0000055!8.04e-09!50 | |ontology_enrichment_celltype=CL:0000540!3.17e-12!33;CL:0000047!3.17e-12!33;CL:0000031!3.17e-12!33;CL:0000404!3.17e-12!33;CL:0000117!1.15e-11!23;CL:0000337!1.15e-11!23;CL:0000393!3.22e-11!39;CL:0000211!3.22e-11!39;CL:0002319!2.13e-09!43;CL:0000221!3.42e-09!44;CL:0000133!3.42e-09!44;CL:0000055!8.04e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.89e-13,33;CL:0000047,1.89e-13,33;CL:0000031,1.89e-13,33;CL:0000404,1.89e-13,33;CL:0000117,2.54e-13,23;CL:0000337,2.54e-13,23;CL:0000393,4.12e-11,39;CL:0000211,4.12e-11,39;CL:0002319,6.69e-09,43;CL:0000221,2.06e-08,44;CL:0000133,2.06e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.20e-27!73;UBERON:0005743!4.20e-27!73;UBERON:0000073!1.16e-25!75;UBERON:0001016!1.16e-25!75;UBERON:0002346!8.67e-24!71;UBERON:0003075!8.67e-24!71;UBERON:0007284!8.67e-24!71;UBERON:0001049!1.08e-23!52;UBERON:0005068!1.08e-23!52;UBERON:0006241!1.08e-23!52;UBERON:0007135!1.08e-23!52;UBERON:0000955!3.76e-22!50;UBERON:0006238!3.76e-22!50;UBERON:0003056!8.82e-22!49;UBERON:0000033!1.65e-21!63;UBERON:0002616!2.10e-21!49;UBERON:0003080!3.84e-20!40;UBERON:0004121!4.51e-20!102;UBERON:0000924!4.51e-20!102;UBERON:0006601!4.51e-20!102;UBERON:0002780!1.42e-19!39;UBERON:0001890!1.42e-19!39;UBERON:0006240!1.42e-19!39;UBERON:0002020!2.30e-18!34;UBERON:0002791!8.80e-16!29;UBERON:0003528!8.80e-16!29;UBERON:0001893!8.80e-16!29;UBERON:0000956!2.57e-12!21;UBERON:0001869!2.57e-12!21;UBERON:0000203!2.57e-12!21;UBERON:0000153!7.42e-12!94;UBERON:0007811!3.98e-11!86;UBERON:0002619!9.67e-10!17;UBERON:0000468!6.62e-09!333;UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10;UBERON:0000025!2.40e-07!114;UBERON:0000922!4.56e-07!328 | |ontology_enrichment_uberon=UBERON:0001017!4.20e-27!73;UBERON:0005743!4.20e-27!73;UBERON:0000073!1.16e-25!75;UBERON:0001016!1.16e-25!75;UBERON:0002346!8.67e-24!71;UBERON:0003075!8.67e-24!71;UBERON:0007284!8.67e-24!71;UBERON:0001049!1.08e-23!52;UBERON:0005068!1.08e-23!52;UBERON:0006241!1.08e-23!52;UBERON:0007135!1.08e-23!52;UBERON:0000955!3.76e-22!50;UBERON:0006238!3.76e-22!50;UBERON:0003056!8.82e-22!49;UBERON:0000033!1.65e-21!63;UBERON:0002616!2.10e-21!49;UBERON:0003080!3.84e-20!40;UBERON:0004121!4.51e-20!102;UBERON:0000924!4.51e-20!102;UBERON:0006601!4.51e-20!102;UBERON:0002780!1.42e-19!39;UBERON:0001890!1.42e-19!39;UBERON:0006240!1.42e-19!39;UBERON:0002020!2.30e-18!34;UBERON:0002791!8.80e-16!29;UBERON:0003528!8.80e-16!29;UBERON:0001893!8.80e-16!29;UBERON:0000956!2.57e-12!21;UBERON:0001869!2.57e-12!21;UBERON:0000203!2.57e-12!21;UBERON:0000153!7.42e-12!94;UBERON:0007811!3.98e-11!86;UBERON:0002619!9.67e-10!17;UBERON:0000468!6.62e-09!333;UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10;UBERON:0000025!2.40e-07!114;UBERON:0000922!4.56e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.09e-28,73;UBERON:0002346,1.64e-27,64;UBERON:0003075,1.64e-27,64;UBERON:0007284,1.64e-27,64;UBERON:0001016,4.33e-27,75;UBERON:0000073,1.08e-25,54;UBERON:0001049,4.18e-25,52;UBERON:0005068,4.18e-25,52;UBERON:0006241,4.18e-25,52;UBERON:0007135,4.18e-25,52;UBERON:0003056,2.44e-23,49;UBERON:0000955,2.34e-22,47;UBERON:0006238,2.34e-22,47;UBERON:0004121,4.29e-22,95;UBERON:0000924,4.29e-22,95;UBERON:0006601,4.29e-22,95;UBERON:0003080,5.86e-22,40;UBERON:0002616,1.63e-21,46;UBERON:0002780,2.65e-21,39;UBERON:0001890,2.65e-21,39;UBERON:0006240,2.65e-21,39;UBERON:0010371,2.66e-21,73;UBERON:0002020,7.35e-20,34;UBERON:0003528,7.21e-17,29;UBERON:0002791,7.21e-17,29;UBERON:0001893,7.21e-17,29;UBERON:0010314,1.13e-14,92;UBERON:0000956,7.95e-13,21;UBERON:0001869,7.95e-13,21;UBERON:0000203,7.95e-13,21;UBERON:0002619,7.02e-10,17;UBERON:0002021,1.46e-08,10;UBERON:0000411,1.46e-08,10;UBERON:0001950,1.46e-08,10 | |||
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|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.4192770370732,0.734187008646726,0.782391344348039,0.65407546914134,0.878744730937887,0.777719596297134,0.419959264876088,0,0,0,0,0.771778308107841,0.85960031981627,1.03134418455488,7.08107613008592,7.93486468908049,3.1691570175309,1.0165335962074,0,0,0,0,2.69640099466564,3.45796474789399,12.9612015385597,13.2305819565057,13.2504725651371,4.57041575046086,5.07997644188711,11.2691535277758,11.8848384062613,11.0306254393203,1.10115880999389,5.36286819957788,5.68344173048101,7.78129097608144,5.94669683415663,8.33461392890816,3.35019598801657,1.68828783009504,3.97275444219706,8.2496003932627,5.83723891276322,6.52398060388552,0.151452386666368,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0.35333957451034,0.704217098883403,1.28326477414318,2.54805239706646,7.11066703153331,0,0,0,0.45673551887624,0,0.890652834388949,1.56136794089522,0,0.691846491768175,1.05505848386836,1.29347577849275,0.376999773989026,0,0.433798070759735,0,1.13236794963186,0,0,0,2.63502717310392,7.95897485891129,0,0,0,0,7.04016005202667,6.40500843946077,34.9319098873763,9.03886464999838,13.2972037811772,8.3115217823824,12.0058534670141,2.85150218780886,0.746441823660558,0.252722758433675,0.841767423545896,3.6433724029557,1.83921683546778,2.16074555766419,3.61691562805716,3.53789795586905,3.58718416797579,2.71735001223214,3.10444044886819,0.862271971731369,2.64748512234947,3.69497360744293,2.6303487891309,3.89266148915837,1.74126083261083,1.64625709126355,4.17971960318836,0,0,0,1.03562886267751,1.40715635988658,0.540186184383045,0.946978942340841,0.787056926989615,1.07986979021165,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.492502392237286,0.486412857275134,0,0.219550115291051,0.671032093801859,11.3556572224629,15.5385964692719,0,0.264450566663544,3.62590025909898,3.94802342162745,2.83508414908605,1.61346819698674,1.77902435075896,0.951128130562796,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,1.36474860983384,0,0.648414149624083,0.398282546508734,2.46568271239006,2.05647322697512,2.25415471346161,1.4255592949172,2.90928730751439,2.10407459670956,0.505892296994058,0,0.31399745568275,0.123397163921801,0,0.667380422864376,0.393117990226406,0.449724224769707,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0,0,0,0.482443521363367,0.184753190166605,3.60033682363921,2.11854469374634,2.20668611507745,0.704070744865506,0.167506257441816,0.238043640886014,0.780534591431195,0.788175720530955,0.8858587585951,0.956728611944923,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0.275936746304732,2.40825884981688,4.10240903072711,0.983609672260053,0.757412781613119,2.52406575533005,1.95219372148319,3.44677436372478,2.38968797952552,2.67358408898873,0.849229592366497,2.02405350837447,5.26060544240361,1.97643888973262,16.3873871375122,2.6968616189571,7.83488656135923,3.25773918707152,7.25868541079156,0,1.69946445308487,0.302323556964751,0.943025398779491,0.885905678642318,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0.316036757935816,1.05418608574999,0,2.7235168460303,5.94201610303324,3.75140182969988,3.42939256050548,4.96552654198366,2.67553226403106,3.1264313914403,3.04464949114599,0.469343416127421,0,0.220528398054962,0.16488625294148,0.484393280087717,0.663442174209714,0.238744688006273,0,0,3.52308073819968,0,1.23832120777933,0.740778109478847,0.188368457004691,0,0,0,0,0,0.954670618015114,3.63786392618306,2.64315307264903,2.16010681643603,1.46361807210128,1.52853794622324,1.21377911746339,1.1571483801547,0.785267825952089,0.259229946583586,0,0,1.64468200648377,1.32366792365678,3.11121901350476,2.19571699912143,2.53434188236167,1.64300134104056,1.43224823328345,0.943734099831398,0.724752362478018,0.576060012515731,0,0.405450430580328,1.1298205288131,0.25984164595559,0.358053391334963,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0,0,0.350630706544707,0,0.221985953374065,0,0,1.15913756419314,1.12609485270709,3.6630324853453,0.214368379079066,0,15.8130515932779,13.3494318587081,17.1868654031819,19.0757032401493,9.59115527678899,9.82012066606611,5.40018000185445,11.2580300806055,7.25027854374727,8.28416498802912,2.07574695168353,6.78342284781753,3.92687293234509,5.34834777550247,1.88651846365184,2.02227859295016,4.4449345560323,3.09052585858341,3.20919209591815,3.03236654116557,2.5347929989024,2.64076877940507,3.183811253976,2.4969809437899,2.46972516509137,2.85776214769844,2.54945517078682,1.92909220463705,2.06042950401653,2.94397840268795,1.37147700954166,3.19456451086807,2.14592570952589,3.77900683244054,3.19971893412124,3.38458431566706,1.46342378298218,2.36762740294059,2.8518863907631,2.80571135828869,3.55905054372522,3.34915240076916,2.455386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| ||
|short_description=p@chr17:27078365..27078409,+ | |short_description=p@chr17:27078365..27078409,+ | ||
}} | }} |
Latest revision as of 12:03, 4 August 2015
Short description: | p@chr17:27078365..27078409, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:27078365..27078409, + |
Coexpression cluster: | MCL_coexpression_mm9:295 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.89e-13 | 33 |
neuronal stem cell | 1.89e-13 | 33 |
neuroblast | 1.89e-13 | 33 |
electrically signaling cell | 1.89e-13 | 33 |
CNS neuron (sensu Vertebrata) | 2.54e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.54e-13 | 23 |
electrically responsive cell | 4.12e-11 | 39 |
electrically active cell | 4.12e-11 | 39 |
neural cell | 6.69e-09 | 43 |
ectodermal cell | 2.06e-08 | 44 |
neurectodermal cell | 2.06e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.09e-28 | 73 |
neurectoderm | 1.64e-27 | 64 |
neural plate | 1.64e-27 | 64 |
presumptive neural plate | 1.64e-27 | 64 |
nervous system | 4.33e-27 | 75 |
regional part of nervous system | 1.08e-25 | 54 |
neural tube | 4.18e-25 | 52 |
neural rod | 4.18e-25 | 52 |
future spinal cord | 4.18e-25 | 52 |
neural keel | 4.18e-25 | 52 |
pre-chordal neural plate | 2.44e-23 | 49 |
brain | 2.34e-22 | 47 |
future brain | 2.34e-22 | 47 |
ectoderm-derived structure | 4.29e-22 | 95 |
ectoderm | 4.29e-22 | 95 |
presumptive ectoderm | 4.29e-22 | 95 |
anterior neural tube | 5.86e-22 | 40 |
regional part of brain | 1.63e-21 | 46 |
regional part of forebrain | 2.65e-21 | 39 |
forebrain | 2.65e-21 | 39 |
future forebrain | 2.65e-21 | 39 |
ecto-epithelium | 2.66e-21 | 73 |
gray matter | 7.35e-20 | 34 |
brain grey matter | 7.21e-17 | 29 |
regional part of telencephalon | 7.21e-17 | 29 |
telencephalon | 7.21e-17 | 29 |
structure with developmental contribution from neural crest | 1.13e-14 | 92 |
cerebral cortex | 7.95e-13 | 21 |
cerebral hemisphere | 7.95e-13 | 21 |
pallium | 7.95e-13 | 21 |
regional part of cerebral cortex | 7.02e-10 | 17 |
occipital lobe | 1.46e-08 | 10 |
visual cortex | 1.46e-08 | 10 |
neocortex | 1.46e-08 | 10 |