FFCP PHASE1:Mm9::chr17:26669879..26669900,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |MCL_coexpression_id=6 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:26669879..26669900,+ | |||
|description=CAGE_peak_at_chr17:26669879..26669900,+ | |description=CAGE_peak_at_chr17:26669879..26669900,+ | ||
|id=chr17:26669879..26669900,+ | |id=chr17:26669879..26669900,+ | ||
|ontology_enrichment_celltype=CL:0000553!1.98e-19!6;CL:0000556!1.98e-19!6;CL:0000414!5.51e-14!11;CL:0000050!9.23e-13!9;CL:0000049!2.09e-12!19;CL:0000988!3.06e-12!32;CL:0002032!3.06e-12!32;CL:0000037!3.06e-12!32;CL:0000566!3.06e-12!32;CL:0000837!3.06e-12!32;CL:0002027!2.02e-10!3;CL:0002006!2.02e-10!3;CL:0002024!2.02e-10!3;CL:0002320!2.30e-09!46;CL:0000134!2.30e-09!46;CL:0002031!4.21e-09!25;CL:0000839!1.20e-08!13;CL:0000219!1.32e-07!54;CL:0000034!2.67e-07!97;CL:0000763!6.59e-07!16 | |ontology_enrichment_celltype=CL:0000553!1.98e-19!6;CL:0000556!1.98e-19!6;CL:0000414!5.51e-14!11;CL:0000050!9.23e-13!9;CL:0000049!2.09e-12!19;CL:0000988!3.06e-12!32;CL:0002032!3.06e-12!32;CL:0000037!3.06e-12!32;CL:0000566!3.06e-12!32;CL:0000837!3.06e-12!32;CL:0002027!2.02e-10!3;CL:0002006!2.02e-10!3;CL:0002024!2.02e-10!3;CL:0002320!2.30e-09!46;CL:0000134!2.30e-09!46;CL:0002031!4.21e-09!25;CL:0000839!1.20e-08!13;CL:0000219!1.32e-07!54;CL:0000034!2.67e-07!97;CL:0000763!6.59e-07!16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,7.11e-12,1;CL:0000792,7.11e-12,1;CL:0000355,1.41e-11,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.85e-11!3;DOID:4045!2.85e-11!3 | |ontology_enrichment_disease=DOID:0060100!2.85e-11!3;DOID:4045!2.85e-11!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.61e-33,3;DOID:4045,3.61e-33,3;DOID:0050686,5.29e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.30e-09!46;UBERON:0002204!1.02e-08!32;UBERON:0002371!6.59e-07!16 | |ontology_enrichment_uberon=UBERON:0002384!2.30e-09!46;UBERON:0002204!1.02e-08!32;UBERON:0002371!6.59e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,1.10411757875383,0.548457734422955,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,12.5013655123808,5.75876118371178,129.999158854854,51.2284113718834,14.5653105909346,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,1.10411757875383,0.548457734422955,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,12.5013655123808,5.75876118371178,129.999158854854,51.2284113718834,14.5653105909346,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:26669879..26669900,+ | |short_description=p@chr17:26669879..26669900,+ | ||
}} | }} |
Latest revision as of 11:50, 4 August 2015
Short description: | p@chr17:26669879..26669900, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:26669879..26669900, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 7.11e-12 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.11e-12 | 1 |
multi-potent skeletal muscle stem cell | 1.41e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.41e-11 | 9 |
striated muscle tissue | 1.41e-11 | 9 |
muscle tissue | 1.41e-11 | 9 |
multilaminar epithelium | 1.41e-11 | 9 |
epithelial vesicle | 1.41e-11 | 9 |
musculature | 1.41e-11 | 9 |
somite | 1.41e-11 | 9 |
myotome | 1.41e-11 | 9 |
presomitic mesoderm | 1.41e-11 | 9 |
presumptive segmental plate | 1.41e-11 | 9 |
dermomyotome | 1.41e-11 | 9 |
trunk paraxial mesoderm | 1.41e-11 | 9 |
musculature of body | 1.74e-10 | 10 |
dense mesenchyme tissue | 1.36e-09 | 11 |
paraxial mesoderm | 1.36e-09 | 11 |
presumptive paraxial mesoderm | 1.36e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.61e-33 | 3 |
muscle cancer | 3.61e-33 | 3 |
organ system cancer | 5.29e-17 | 6 |