FFCP PHASE1:Mm9::chr17:26645694..26645719,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:26645694..26645719,+ | |||
|description=CAGE_peak_at_chr17:26645694..26645719,+ | |description=CAGE_peak_at_chr17:26645694..26645719,+ | ||
|id=chr17:26645694..26645719,+ | |id=chr17:26645694..26645719,+ | ||
|ontology_enrichment_celltype=CL:0000063!1.16e-07!66 | |ontology_enrichment_celltype=CL:0000063!1.16e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.44e-14,9;CL:0002251,1.44e-14,9;CL:0000223,1.47e-12,20;CL:0000066,7.26e-12,25;CL:0002250,9.25e-09,3;CL:0000838,1.67e-08,12;CL:0000791,1.87e-08,9;CL:0000789,1.87e-08,9;CL:0002420,1.87e-08,9;CL:0002419,1.87e-08,9;CL:0000790,1.87e-08,9;CL:0002076,2.21e-08,15;CL:0000239,6.49e-08,6;CL:0000677,6.49e-08,6;CL:0000584,6.49e-08,6;CL:0000542,8.45e-08,13;CL:0000051,8.45e-08,13;CL:0000034,6.29e-07,97;CL:0002320,6.60e-07,46;CL:0000134,6.60e-07,46;CL:0000084,7.51e-07,11;CL:0000827,7.51e-07,11;CL:0000075,8.68e-07,7;CL:0000723,9.96e-07,91;CL:0000048,9.96e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.82e-10,3;DOID:4045,3.82e-10,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.44e-14,9;UBERON:0004808,1.44e-14,9;UBERON:0001277,1.44e-14,9;UBERON:0000485,9.30e-12,11;UBERON:0000490,1.70e-10,66;UBERON:0001242,8.24e-10,13;UBERON:0001262,8.24e-10,13;UBERON:0004786,8.24e-10,13;UBERON:0003929,1.35e-08,55;UBERON:0000344,2.21e-08,15;UBERON:0002384,6.60e-07,46 | |||
|phase1_expression=0.640595388419176,1.04692622291808,0,4.83942738090928,4.50806156951712,1.17515490338323,0.467225281191051,5.16493293766305,0.140788722151667,0.468129052643987,0,0.0797721589953364,4.10881751834894,2.53519167015092,0,0.607425802169478,0,1.26184866143295,0.548457734422955,1.69755860719212,0.0850432901510698,0.0992909512008853,0,0,0,2.8711598205751,0,0.861884930743556,0,0.252030129759931,0.221730510655305,0,0,0,2.3108129580102,1.16364251750945,1.02084678131185,10.4632907684227,4.6880120671428,3.66466620781659,66.4701581475046,32.1031377930469,9.71020706062307,0.125896817975577,0.101376931219515,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,1.00669563634642,7.97898356212479,3.02484419228218,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,5.2175607966302,0,2.03991400112325,0,1.29955283489534,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,0.29688427812965,0,0,0.461230994512117,0,0,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.599075622529601,2.39961092397363,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0.702213187313235,0.51469581422943,0.852490498186778,0,0.234526059981096,0,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.493679549740441,0.32833492815819,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.295220295959204,0,0.123397163921801,1.1858105083486,0.166845105716094,0,0.674586337154561,0.405720242777006,0,0,0,0.648540907100142,0,0,1.11642284300551,0,0.252578877947112,0,1.4473305640901,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0,0.780534591431195,0,0.221464689648775,0.159454768657487,0.983179888294428,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,1.51482556322624,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0.913394847343798,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0.512612642393558,0.206386867963223,0,0.188368457004691,0.27338845544205,0.915112692826091,1.01987057996313,0.419854356970974,0.829199842826543,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0.388844919875379,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0.282328141245992,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0.640595388419176,1.04692622291808,0,4.83942738090928,4.50806156951712,1.17515490338323,0.467225281191051,5.16493293766305,0.140788722151667,0.468129052643987,0,0.0797721589953364,4.10881751834894,2.53519167015092,0,0.607425802169478,0,1.26184866143295,0.548457734422955,1.69755860719212,0.0850432901510698,0.0992909512008853,0,0,0,2.8711598205751,0,0.861884930743556,0,0.252030129759931,0.221730510655305,0,0,0,2.3108129580102,1.16364251750945,1.02084678131185,10.4632907684227,4.6880120671428,3.66466620781659,66.4701581475046,32.1031377930469,9.71020706062307,0.125896817975577,0.101376931219515,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,1.00669563634642,7.97898356212479,3.02484419228218,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,5.2175607966302,0,2.03991400112325,0,1.29955283489534,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,0.29688427812965,0,0,0.461230994512117,0,0,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.599075622529601,2.39961092397363,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0.702213187313235,0.51469581422943,0.852490498186778,0,0.234526059981096,0,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.493679549740441,0.32833492815819,0.243206428637567,0.438599962275997,0.219550115291051,0.268412837520744,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.295220295959204,0,0.123397163921801,1.1858105083486,0.166845105716094,0,0.674586337154561,0.405720242777006,0,0,0,0.648540907100142,0,0,1.11642284300551,0,0.252578877947112,0,1.4473305640901,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0,0.780534591431195,0,0.221464689648775,0.159454768657487,0.983179888294428,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,1.51482556322624,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0.913394847343798,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0.512612642393558,0.206386867963223,0,0.188368457004691,0.27338845544205,0.915112692826091,1.01987057996313,0.419854356970974,0.829199842826543,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0.388844919875379,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0.282328141245992,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr17:26645694..26645719,+ | |short_description=p@chr17:26645694..26645719,+ | ||
}} | }} |
Latest revision as of 11:47, 4 August 2015
Short description: | p@chr17:26645694..26645719, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:26645694..26645719, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.44e-14 | 9 |
epithelial cell of alimentary canal | 1.44e-14 | 9 |
endodermal cell | 1.47e-12 | 20 |
epithelial cell | 7.26e-12 | 25 |
intestinal crypt stem cell | 9.25e-09 | 3 |
lymphoid lineage restricted progenitor cell | 1.67e-08 | 12 |
mature alpha-beta T cell | 1.87e-08 | 9 |
alpha-beta T cell | 1.87e-08 | 9 |
immature T cell | 1.87e-08 | 9 |
mature T cell | 1.87e-08 | 9 |
immature alpha-beta T cell | 1.87e-08 | 9 |
endo-epithelial cell | 2.21e-08 | 15 |
brush border epithelial cell | 6.49e-08 | 6 |
gut absorptive cell | 6.49e-08 | 6 |
enterocyte | 6.49e-08 | 6 |
lymphocyte | 8.45e-08 | 13 |
common lymphoid progenitor | 8.45e-08 | 13 |
stem cell | 6.29e-07 | 97 |
connective tissue cell | 6.60e-07 | 46 |
mesenchymal cell | 6.60e-07 | 46 |
T cell | 7.51e-07 | 11 |
pro-T cell | 7.51e-07 | 11 |
columnar/cuboidal epithelial cell | 8.68e-07 | 7 |
somatic stem cell | 9.96e-07 | 91 |
multi fate stem cell | 9.96e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.44e-14 | 9 |
gastrointestinal system epithelium | 1.44e-14 | 9 |
intestinal epithelium | 1.44e-14 | 9 |
simple columnar epithelium | 9.30e-12 | 11 |
unilaminar epithelium | 1.70e-10 | 66 |
intestinal mucosa | 8.24e-10 | 13 |
wall of intestine | 8.24e-10 | 13 |
gastrointestinal system mucosa | 8.24e-10 | 13 |
gut epithelium | 1.35e-08 | 55 |
mucosa | 2.21e-08 | 15 |
connective tissue | 6.60e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.82e-10 | 3 |
muscle cancer | 3.82e-10 | 3 |