FFCP PHASE1:Mm9::chr7:146399392..146399411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:146399392..146399411,+ | |||
|description=CAGE_peak_at_chr7:146399392..146399411,+ | |description=CAGE_peak_at_chr7:146399392..146399411,+ | ||
|id=chr7:146399392..146399411,+ | |id=chr7:146399392..146399411,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.34e-12,1;CL:0002078,3.34e-12,1;CL:0000115,3.34e-12,1;CL:0002262,3.34e-12,1;CL:1000398,3.34e-12,1;CL:0000355,1.53e-11,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.64e-33,3;DOID:4045,4.64e-33,3;DOID:0050686,6.00e-17,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.34e-12,1;UBERON:0001281,3.34e-12,1;UBERON:0000353,3.34e-12,1;UBERON:0003497,3.34e-12,1;UBERON:0003909,3.34e-12,1;UBERON:0003928,3.34e-12,1;UBERON:0003835,3.34e-12,1;UBERON:0003513,3.34e-12,1;UBERON:0001280,3.34e-12,1;UBERON:0004647,3.34e-12,1;UBERON:0002294,3.34e-12,1;UBERON:0001173,3.34e-12,1;UBERON:0004912,3.34e-12,1;UBERON:0005171,3.34e-12,1;UBERON:0001134,1.53e-11,9;UBERON:0002036,1.53e-11,9;UBERON:0002385,1.53e-11,9;UBERON:0000486,1.53e-11,9;UBERON:0007503,1.53e-11,9;UBERON:0001015,1.53e-11,9;UBERON:0002329,1.53e-11,9;UBERON:0003082,1.53e-11,9;UBERON:0003059,1.53e-11,9;UBERON:0007282,1.53e-11,9;UBERON:0004290,1.53e-11,9;UBERON:0009618,1.53e-11,9;UBERON:0000383,1.87e-10,10;UBERON:0007524,1.46e-09,11;UBERON:0003077,1.46e-09,11;UBERON:0007285,1.46e-09,11 | |||
|phase1_expression=0.640595388419176,0,0,0.30246421130683,0.500895729946347,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.437102012094987,0,0,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.866554859253824,0.166234645358492,0.204169356262369,2.51118978442145,1.5626706890476,1.57057123192139,23.5292595212406,2.73218193983378,0.971020706062307,0.125896817975577,0.608261587317087,0,0,0,0,0.194429899074283,0.139986421625363,0,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0.263772575460388,0.182975287204819,0,0.279182999001381,0,0,0,0,0.186399445825301,0,0.0755715601067855,1.73918693221007,0,0,0,0,0,0,0,0.519572009205738,0.35333957451034,0.422530259330042,0,0,0,0,0.253359865475099,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0.884610551949874,0,0,0.484875253135222,0,0.292780797011547,0,0,0.11981512450592,0,0.254140454146129,0,0,0.376963056338593,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.468508622798644,0,0.215567992932842,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0,0.23674473558521,0.196764231747404,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0.129358683782755,0,0.709360934569094,0.178368817602071,0.658196082408484,2.13125464380219,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0.559805809294632,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0,0.404593039154462,0,0,0,0,0.56369293868419,0,0,0.388902376688095,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0.632022241256357,0.202725215290164,0,0,0.179026695667481,0,0.360586348559907,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,0,0.512200817262403,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0.640595388419176,0,0,0.30246421130683,0.500895729946347,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.437102012094987,0,0,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.866554859253824,0.166234645358492,0.204169356262369,2.51118978442145,1.5626706890476,1.57057123192139,23.5292595212406,2.73218193983378,0.971020706062307,0.125896817975577,0.608261587317087,0,0,0,0,0.194429899074283,0.139986421625363,0,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0.263772575460388,0.182975287204819,0,0.279182999001381,0,0,0,0,0.186399445825301,0,0.0755715601067855,1.73918693221007,0,0,0,0,0,0,0,0.519572009205738,0.35333957451034,0.422530259330042,0,0,0,0,0.253359865475099,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0.884610551949874,0,0,0.484875253135222,0,0.292780797011547,0,0,0.11981512450592,0,0.254140454146129,0,0,0.376963056338593,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.468508622798644,0,0.215567992932842,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0,0.23674473558521,0.196764231747404,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0.129358683782755,0,0.709360934569094,0.178368817602071,0.658196082408484,2.13125464380219,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0.559805809294632,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0,0.404593039154462,0,0,0,0,0.56369293868419,0,0,0.388902376688095,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0.632022241256357,0.202725215290164,0,0,0.179026695667481,0,0.360586348559907,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,0,0.512200817262403,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:146399392..146399411,+ | |short_description=p@chr7:146399392..146399411,+ | ||
}} | }} |
Latest revision as of 10:56, 4 August 2015
Short description: | p@chr7:146399392..146399411, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:146399392..146399411, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.34e-12 | 1 |
meso-epithelial cell | 3.34e-12 | 1 |
endothelial cell | 3.34e-12 | 1 |
endothelial cell of sinusoid | 3.34e-12 | 1 |
endothelial cell of hepatic sinusoid | 3.34e-12 | 1 |
multi-potent skeletal muscle stem cell | 1.53e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.34e-12 | 1 |
hepatic sinusoid | 3.34e-12 | 1 |
parenchyma | 3.34e-12 | 1 |
abdomen blood vessel | 3.34e-12 | 1 |
sinusoid | 3.34e-12 | 1 |
digestive system duct | 3.34e-12 | 1 |
abdominal segment blood vessel | 3.34e-12 | 1 |
trunk blood vessel | 3.34e-12 | 1 |
liver parenchyma | 3.34e-12 | 1 |
liver lobule | 3.34e-12 | 1 |
biliary system | 3.34e-12 | 1 |
biliary tree | 3.34e-12 | 1 |
biliary bud | 3.34e-12 | 1 |
hepatic duct | 3.34e-12 | 1 |
skeletal muscle tissue | 1.53e-11 | 9 |
striated muscle tissue | 1.53e-11 | 9 |
muscle tissue | 1.53e-11 | 9 |
multilaminar epithelium | 1.53e-11 | 9 |
epithelial vesicle | 1.53e-11 | 9 |
musculature | 1.53e-11 | 9 |
somite | 1.53e-11 | 9 |
myotome | 1.53e-11 | 9 |
presomitic mesoderm | 1.53e-11 | 9 |
presumptive segmental plate | 1.53e-11 | 9 |
dermomyotome | 1.53e-11 | 9 |
trunk paraxial mesoderm | 1.53e-11 | 9 |
musculature of body | 1.87e-10 | 10 |
dense mesenchyme tissue | 1.46e-09 | 11 |
paraxial mesoderm | 1.46e-09 | 11 |
presumptive paraxial mesoderm | 1.46e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.64e-33 | 3 |
muscle cancer | 4.64e-33 | 3 |
organ system cancer | 6.00e-17 | 6 |