FFCP PHASE1:Mm9::chr14:52935860..52935874,-: Difference between revisions
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{{FFCP|EntrezGene=50524|HGNC=|MCL_coexpression_id=1|UniProt=E9Q3Q0,Q8BP69|association_with_transcript=35bp_to_ENSMUST00000163383,uc007tpe.1_5end|description=CAGE_peak_3_at_Sall2_5end|id=chr14:52935860..52935874,-|ontology_enrichment_celltype=CL:0000540!2.47e-12!33;CL:0000047!2.47e-12!33;CL:0000031!2.47e-12!33;CL:0000404!2.47e-12!33;CL:0000117!6.31e-12!23;CL:0000337!6.31e-12!23;CL:0000221!7.29e-10!44;CL:0000133!7.29e-10!44;CL:0000393!1.46e-09!39;CL:0000211!1.46e-09!39;CL:0002319!2.34e-09!43;CL:0000055!5.36e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.99e-16,23;CL:0000337,7.99e-16,23;CL:0000540,1.39e-12,33;CL:0000047,1.39e-12,33;CL:0000031,1.39e-12,33;CL:0000404,1.39e-12,33;CL:0000393,2.17e-09,39;CL:0000211,2.17e-09,39;CL:0000221,3.05e-09,44;CL:0000133,3.05e-09,44;CL:0002319,1.38e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.33e-26!73;UBERON:0005743!7.33e-26!73;UBERON:0000073!6.22e-25!75;UBERON:0001016!6.22e-25!75;UBERON:0001049!3.03e-21!52;UBERON:0005068!3.03e-21!52;UBERON:0006241!3.03e-21!52;UBERON:0007135!3.03e-21!52;UBERON:0002346!6.10e-21!71;UBERON:0003075!6.10e-21!71;UBERON:0007284!6.10e-21!71;UBERON:0000033!2.94e-20!63;UBERON:0000955!6.01e-20!50;UBERON:0006238!6.01e-20!50;UBERON:0004121!1.54e-19!102;UBERON:0000924!1.54e-19!102;UBERON:0006601!1.54e-19!102;UBERON:0002616!2.13e-19!49;UBERON:0000153!1.76e-17!94;UBERON:0003056!4.25e-17!49;UBERON:0007811!1.24e-16!86;UBERON:0003080!4.36e-16!40;UBERON:0002780!2.18e-15!39;UBERON:0001890!2.18e-15!39;UBERON:0006240!2.18e-15!39;UBERON:0002020!1.01e-14!34;UBERON:0002791!1.18e-11!29;UBERON:0003528!1.18e-11!29;UBERON:0001893!1.18e-11!29;UBERON:0000475!7.98e-08!200;UBERON:0000956!1.72e-07!21;UBERON:0001869!1.72e-07!21;UBERON:0000203!1.72e-07!21;UBERON:0000025!2.69e-07!114;UBERON:0000468!3.25e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.35e-32,54;UBERON:0001017,1.11e-31,73;UBERON:0001016,2.70e-30,75;UBERON:0001049,1.34e-29,52;UBERON:0005068,1.34e-29,52;UBERON:0006241,1.34e-29,52;UBERON:0007135,1.34e-29,52;UBERON:0002346,8.26e-29,64;UBERON:0003075,8.26e-29,64;UBERON:0007284,8.26e-29,64;UBERON:0004121,1.17e-26,95;UBERON:0000924,1.17e-26,95;UBERON:0006601,1.17e-26,95;UBERON:0010371,1.01e-25,73;UBERON:0000955,2.42e-24,47;UBERON:0006238,2.42e-24,47;UBERON:0002616,1.59e-23,46;UBERON:0003056,1.17e-21,49;UBERON:0003080,1.96e-21,40;UBERON:0002780,2.22e-20,39;UBERON:0001890,2.22e-20,39;UBERON:0006240,2.22e-20,39;UBERON:0010314,7.93e-20,92;UBERON:0002020,1.62e-19,34;UBERON:0003528,6.85e-15,29;UBERON:0002791,6.85e-15,29;UBERON:0001893,6.85e-15,29;UBERON:0002021,9.62e-09,10;UBERON:0000411,9.62e-09,10;UBERON:0001950,9.62e-09,10;UBERON:0000956,1.07e-08,21;UBERON:0001869,1.07e-08,21;UBERON:0000203,1.07e-08,21;UBERON:0003076,1.51e-08,12;UBERON:0003057,1.51e-08,12;UBERON:0002420,4.95e-08,8;UBERON:0007245,4.95e-08,8;UBERON:0010009,4.95e-08,8;UBERON:0010011,4.95e-08,8;UBERON:0000454,4.95e-08,8;UBERON:0002619,7.01e-08,17;UBERON:0000025,2.09e-07,114;UBERON:0002240,2.64e-07,6;UBERON:0005174,2.64e-07,6;UBERON:0001137,2.64e-07,6;UBERON:0004111,3.74e-07,122;UBERON:0000489,6.05e-07,21|phase1_expression=1.92178616525753,0,0,0,0.500895729946347,0,0,0.516493293766305,0.422366166455,0.234064526321993,0,0.0797721589953364,0.856003649656029,0.524522414513984,0,0,0,0,0,0,1.27564935226605,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.436050312760893,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0.515672092277442,3.23706337375356,2.64495489636016,2.53532561402472,0,0,0.449949858640699,0,0,0.898800331555214,1.53687322128622,1.03689612308478,0.675029691658453,1.68259969081106,4.85606673486466,5.30084498283872,1.46988959057945,0.766763768145891,1.83843757322004,9.91042928994498,9.06580100404833,6.45147439676223,3.42904348098504,2.10421580285542,3.12548022334056,5.862842979029,7.31591393041184,5.65353516774197,6.77645746589436,3.70166370077668,4.65998614563251,0.151452386666368,0.377857800533928,0.869593466105033,0,0,0,0,0,0.561777680527007,0.511290967734173,0,0,4.08445917352373,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,1.56136794089522,0,0.691846491768175,0.150722640552623,1.05829836422134,0.376999773989026,0,0,0,0,0.220841518460394,0,0,2.63502717310392,3.97948742945565,0.255457055208591,0,0,0,8.23848516726525,5.49000723382352,1.88481528169297,3.65031072403781,2.55715457330331,7.68815764870372,7.13861557498134,0.81471491080253,0.248813941220186,0,0.631325567659422,1.56144531555244,0.229902104433473,1.44049703844279,1.05493372485001,0.680364991513279,1.15302348256365,1.3118241438362,1.29351685369508,1.29340795759705,1.89106080167819,0.879755620819744,0.657587197282725,0.834141747676794,0.696504333044333,0.411564272815887,1.99034266818493,0,0,0,1.03562886267751,0.234526059981096,0.36012412292203,1.18372367792605,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0.35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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50524 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q3Q0,uniprot:Q8BP69 | |||
|association_with_transcript=35bp_to_ENSMUST00000163383,uc007tpe.1_5end | |||
|cluster_id=chr14:52935860..52935874,- | |||
|description=CAGE_peak_3_at_Sall2_5end | |||
|id=chr14:52935860..52935874,- | |||
|ontology_enrichment_celltype=CL:0000540!2.47e-12!33;CL:0000047!2.47e-12!33;CL:0000031!2.47e-12!33;CL:0000404!2.47e-12!33;CL:0000117!6.31e-12!23;CL:0000337!6.31e-12!23;CL:0000221!7.29e-10!44;CL:0000133!7.29e-10!44;CL:0000393!1.46e-09!39;CL:0000211!1.46e-09!39;CL:0002319!2.34e-09!43;CL:0000055!5.36e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.99e-16,23;CL:0000337,7.99e-16,23;CL:0000540,1.39e-12,33;CL:0000047,1.39e-12,33;CL:0000031,1.39e-12,33;CL:0000404,1.39e-12,33;CL:0000393,2.17e-09,39;CL:0000211,2.17e-09,39;CL:0000221,3.05e-09,44;CL:0000133,3.05e-09,44;CL:0002319,1.38e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.33e-26!73;UBERON:0005743!7.33e-26!73;UBERON:0000073!6.22e-25!75;UBERON:0001016!6.22e-25!75;UBERON:0001049!3.03e-21!52;UBERON:0005068!3.03e-21!52;UBERON:0006241!3.03e-21!52;UBERON:0007135!3.03e-21!52;UBERON:0002346!6.10e-21!71;UBERON:0003075!6.10e-21!71;UBERON:0007284!6.10e-21!71;UBERON:0000033!2.94e-20!63;UBERON:0000955!6.01e-20!50;UBERON:0006238!6.01e-20!50;UBERON:0004121!1.54e-19!102;UBERON:0000924!1.54e-19!102;UBERON:0006601!1.54e-19!102;UBERON:0002616!2.13e-19!49;UBERON:0000153!1.76e-17!94;UBERON:0003056!4.25e-17!49;UBERON:0007811!1.24e-16!86;UBERON:0003080!4.36e-16!40;UBERON:0002780!2.18e-15!39;UBERON:0001890!2.18e-15!39;UBERON:0006240!2.18e-15!39;UBERON:0002020!1.01e-14!34;UBERON:0002791!1.18e-11!29;UBERON:0003528!1.18e-11!29;UBERON:0001893!1.18e-11!29;UBERON:0000475!7.98e-08!200;UBERON:0000956!1.72e-07!21;UBERON:0001869!1.72e-07!21;UBERON:0000203!1.72e-07!21;UBERON:0000025!2.69e-07!114;UBERON:0000468!3.25e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.35e-32,54;UBERON:0001017,1.11e-31,73;UBERON:0001016,2.70e-30,75;UBERON:0001049,1.34e-29,52;UBERON:0005068,1.34e-29,52;UBERON:0006241,1.34e-29,52;UBERON:0007135,1.34e-29,52;UBERON:0002346,8.26e-29,64;UBERON:0003075,8.26e-29,64;UBERON:0007284,8.26e-29,64;UBERON:0004121,1.17e-26,95;UBERON:0000924,1.17e-26,95;UBERON:0006601,1.17e-26,95;UBERON:0010371,1.01e-25,73;UBERON:0000955,2.42e-24,47;UBERON:0006238,2.42e-24,47;UBERON:0002616,1.59e-23,46;UBERON:0003056,1.17e-21,49;UBERON:0003080,1.96e-21,40;UBERON:0002780,2.22e-20,39;UBERON:0001890,2.22e-20,39;UBERON:0006240,2.22e-20,39;UBERON:0010314,7.93e-20,92;UBERON:0002020,1.62e-19,34;UBERON:0003528,6.85e-15,29;UBERON:0002791,6.85e-15,29;UBERON:0001893,6.85e-15,29;UBERON:0002021,9.62e-09,10;UBERON:0000411,9.62e-09,10;UBERON:0001950,9.62e-09,10;UBERON:0000956,1.07e-08,21;UBERON:0001869,1.07e-08,21;UBERON:0000203,1.07e-08,21;UBERON:0003076,1.51e-08,12;UBERON:0003057,1.51e-08,12;UBERON:0002420,4.95e-08,8;UBERON:0007245,4.95e-08,8;UBERON:0010009,4.95e-08,8;UBERON:0010011,4.95e-08,8;UBERON:0000454,4.95e-08,8;UBERON:0002619,7.01e-08,17;UBERON:0000025,2.09e-07,114;UBERON:0002240,2.64e-07,6;UBERON:0005174,2.64e-07,6;UBERON:0001137,2.64e-07,6;UBERON:0004111,3.74e-07,122;UBERON:0000489,6.05e-07,21 | |||
|phase1_expression=1.92178616525753,0,0,0,0.500895729946347,0,0,0.516493293766305,0.422366166455,0.234064526321993,0,0.0797721589953364,0.856003649656029,0.524522414513984,0,0,0,0,0,0,1.27564935226605,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.436050312760893,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0.515672092277442,3.23706337375356,2.64495489636016,2.53532561402472,0,0,0.449949858640699,0,0,0.898800331555214,1.53687322128622,1.03689612308478,0.675029691658453,1.68259969081106,4.85606673486466,5.30084498283872,1.46988959057945,0.766763768145891,1.83843757322004,9.91042928994498,9.06580100404833,6.45147439676223,3.42904348098504,2.10421580285542,3.12548022334056,5.862842979029,7.31591393041184,5.65353516774197,6.77645746589436,3.70166370077668,4.65998614563251,0.151452386666368,0.377857800533928,0.869593466105033,0,0,0,0,0,0.561777680527007,0.511290967734173,0,0,4.08445917352373,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,1.56136794089522,0,0.691846491768175,0.150722640552623,1.05829836422134,0.376999773989026,0,0,0,0,0.220841518460394,0,0,2.63502717310392,3.97948742945565,0.255457055208591,0,0,0,8.23848516726525,5.49000723382352,1.88481528169297,3.65031072403781,2.55715457330331,7.68815764870372,7.13861557498134,0.81471491080253,0.248813941220186,0,0.631325567659422,1.56144531555244,0.229902104433473,1.44049703844279,1.05493372485001,0.680364991513279,1.15302348256365,1.3118241438362,1.29351685369508,1.29340795759705,1.89106080167819,0.879755620819744,0.657587197282725,0.834141747676794,0.696504333044333,0.411564272815887,1.99034266818493,0,0,0,1.03562886267751,0.234526059981096,0.36012412292203,1.18372367792605,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0.350296027101508,0.822799249567402,0.32833492815819,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,2.3131894342054,1.13195073617213,0,0,2.98603550749328,2.09013004674395,0.644337306610467,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,5.87970492954553,3.88444942873078,3.38123207019241,3.25842124552503,3.68509725618489,2.66516115583211,1.13825766823663,1.47610147979602,0.470996183524124,0.987177311374404,0.296452627087149,0.333690211432188,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0.505157755894224,0.179397413521912,0,0,1.51593129416388,2.11854469374634,0.848725428875941,0.938760993154008,0.670025029767263,0,0.390267295715598,0.315270288212382,0.221464689648775,0.318909537314974,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,7.70642831941401,7.85318300167761,0.163934945376675,0,1.26203287766503,0.780877488593277,0.646270193198397,1.19484398976276,0.891194696329576,1.13230612315533,0.809621403349789,0.584511715822624,0.395287777946524,3.21321316421807,0.709700426041343,1.24645922567079,1.30309567482861,0.824850614862677,0,0.728341908464944,0.906970670894253,0.565815239267694,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,3.78128297465751,3.49268446213437,3.00071849044229,1.24138163549592,1.42695054081656,1.81003922662333,1.522324745573,0,0,0.441056796109924,0,0.484393280087717,0.241251699712623,0,0.164140899745061,0,8.52956389248344,0.170870880797853,2.47664241555867,1.85194527369712,0,0.546776910884101,0.457556346413045,0,0.419854356970974,0.276399947608848,0,3.16335993581135,1.42323626988794,0.540026704109006,0.418176592028937,0.218362563746178,0,0.247960367176008,0,0.259229946583586,0,0,1.79419855252775,1.98550188548517,1.36115831840833,0.774958940866387,0.844780627453891,0.938857909166032,0.651021924219751,0.943734099831398,0.966336483304024,0,1.26404448251271,1.21635129174099,0.616265742988964,0.389762468933385,0.895133478337407,0.79472541912506,0.480781798079875,0.738447635872886,0.302899349844443,0.381034033274999,1.10908803650525,0.584747284438515,0.577271049841977,0.818138315270983,0,0,0.179427713218951,0,0.19318959403219,0,0,0.214368379079066,0,2.25900737046827,2.76195141904306,4.58316410751517,2.40594455281163,3.42541259885321,1.5107877947794,4.72515750162264,2.2516060161211,3.62513927187364,4.65984280576638,3.63255716544618,3.19219898720825,1.53660245178721,0.486213434136588,0.419226325255965,0.551530525350042,1.11123363900808,0.618105171716683,0.64183841918363,1.01078884705519,0.50695859978048,0.188626341386076,0.468207537349412,0.960377286073039,0.804096565378586,0,0,0.578727661391115,0.412085900803307,0.883193520806384,0.342869252385415,0.354951612318675,1.1921809497366,0.290692833264657,0.752875043322645,0.592302255241736,0.73171189149109,0.789209134313529,0.407412341537585,1.68342681497322,0.593175090620871,0.591026894253381,0,0.619747364743864,1.15743966588685,2.49810577937946,1.40358965067245,0.644613162144895,0.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| |||
|short_description=p3@Sall2 | |||
}} |
Revision as of 10:03, 4 August 2015
Short description: | p3@Sall2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sall2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 35bp_to_ENSMUST00000163383, uc007tpe.1_5end |
EntrezGene: | 50524 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.99e-16 | 23 |
neuroblast (sensu Vertebrata) | 7.99e-16 | 23 |
neuron | 1.39e-12 | 33 |
neuronal stem cell | 1.39e-12 | 33 |
neuroblast | 1.39e-12 | 33 |
electrically signaling cell | 1.39e-12 | 33 |
electrically responsive cell | 2.17e-09 | 39 |
electrically active cell | 2.17e-09 | 39 |
ectodermal cell | 3.05e-09 | 44 |
neurectodermal cell | 3.05e-09 | 44 |
neural cell | 1.38e-08 | 43 |