FFCP PHASE1:Mm9::chr10:39089366..39089401,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=102 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:39089366..39089401,- | |||
|description=CAGE_peak_at_chr10:39089366..39089401,- | |description=CAGE_peak_at_chr10:39089366..39089401,- | ||
|id=chr10:39089366..39089401,- | |id=chr10:39089366..39089401,- | ||
|ontology_enrichment_celltype=CL:0000791!2.40e-08!9;CL:0000789!2.40e-08!9;CL:0002420!2.40e-08!9;CL:0002419!2.40e-08!9;CL:0000790!2.40e-08!9;CL:0000624!1.31e-07!8;CL:0000838!1.38e-07!12;CL:0000542!1.68e-07!13;CL:0000051!1.68e-07!13;CL:0000084!7.35e-07!11;CL:0000827!7.35e-07!11 | |ontology_enrichment_celltype=CL:0000791!2.40e-08!9;CL:0000789!2.40e-08!9;CL:0002420!2.40e-08!9;CL:0002419!2.40e-08!9;CL:0000790!2.40e-08!9;CL:0000624!1.31e-07!8;CL:0000838!1.38e-07!12;CL:0000542!1.68e-07!13;CL:0000051!1.68e-07!13;CL:0000084!7.35e-07!11;CL:0000827!7.35e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.91e-37,9;CL:0000789,1.91e-37,9;CL:0002420,1.91e-37,9;CL:0002419,1.91e-37,9;CL:0000790,1.91e-37,9;CL:0000838,2.99e-34,12;CL:0000624,1.53e-33,8;CL:0000542,1.69e-31,13;CL:0000051,1.69e-31,13;CL:0000084,2.11e-30,11;CL:0000827,2.11e-30,11;CL:0000893,2.05e-25,6;CL:0002489,2.05e-25,6;CL:0000898,2.05e-25,6;CL:0000809,2.05e-25,6;CL:0000810,2.05e-25,6;CL:0000895,2.05e-25,6;CL:0000808,2.05e-25,6;CL:0000894,2.05e-25,6;CL:0000806,2.05e-25,6;CL:0000807,2.05e-25,6;CL:0000805,2.05e-25,6;CL:0002425,2.05e-25,6;CL:0002436,2.05e-25,6;CL:0002427,2.05e-25,6;CL:0002428,2.05e-25,6;CL:0002429,2.05e-25,6;CL:0002433,2.05e-25,6;CL:0002431,2.05e-25,6;CL:0002432,2.05e-25,6;CL:0000738,1.03e-23,17;CL:0002087,1.03e-23,17;CL:0002031,1.31e-15,25;CL:0000988,7.82e-12,32;CL:0002032,7.82e-12,32;CL:0000037,7.82e-12,32;CL:0000837,7.82e-12,32;CL:0002320,1.85e-09,46;CL:0000134,1.85e-09,46;CL:0000219,8.91e-08,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.91e-08!14;UBERON:0000991!4.33e-07!18;UBERON:0005564!4.33e-07!18;UBERON:0003135!5.26e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.71e-26,14;UBERON:0003135,1.92e-24,15;UBERON:0003101,8.00e-23,16;UBERON:0000079,8.00e-23,16;UBERON:0004176,2.15e-21,17;UBERON:0009196,2.15e-21,17;UBERON:0009117,2.15e-21,17;UBERON:0000991,4.01e-20,18;UBERON:0005564,4.01e-20,18;UBERON:0003133,1.02e-14,24;UBERON:0005156,1.82e-13,26;UBERON:0000990,1.82e-13,26;UBERON:0002384,1.85e-09,46;UBERON:0002323,5.24e-09,37;UBERON:0004458,5.24e-09,37;UBERON:0003886,9.92e-09,38;UBERON:0002553,1.82e-08,39;UBERON:0000926,6.85e-08,120;UBERON:0004120,6.85e-08,120;UBERON:0006603,6.85e-08,120;UBERON:0001048,9.86e-07,134 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,8.00564605337773,16.8946466582,16.3845168425395,1.88339765048055,1.99430397488341,9.0736386863539,6.46910977900581,0,0.404950534779652,0.699561878128147,0.788655413395594,0.274228867211478,0,0.255129870453209,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,7.25362142011344,2.35265659399725,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.414758449233911,0.135005938331691,0.210324961351382,0,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0.711858403995515,0.186399445825301,0,0,6.95674772884027,0.860423876981386,0,0,0,0.448026887097336,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.753613202763113,0.23517741427141,0.251333182659351,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.324482526135515,0.407357455401265,0.248813941220186,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0.278047249225598,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0.473489471170421,0.787056926989615,0,0.232533944750408,0.536546802799238,0.467061369468678,0.16455984991348,0,0,0.146199987425332,0,0.268412837520744,0,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0.581857461502877,0,0.252946148497029,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0,0.312037673114561,0,0.179397413521912,0.964887042726734,0.184753190166605,0,0.651859905768103,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0.275936746304732,0.321101179975584,0,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0,0.98931751764888,0,0.301564624640779,0.238744688006273,0.656563598980245,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0,0,0.679913719975421,0.279902904647316,0.276399947608848,0,0.316335993581135,0,0,0.209088296014469,0.436725127492355,0.674321731924103,0.165306911450672,0,0,0.621339313086926,1.12738587736838,1.19613236835183,0.66183396182839,2.13896307178452,1.54991788173277,1.520605129417,1.5256441023948,1.3020438484395,1.46803082195995,1.93267296660805,1.44015003128933,0,0,0,0,0.537080087002444,0,0.240390899039938,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.194915761479505,0.0962118416403295,0.818138315270983,0,0,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.459483751644906,0.476293691283074,0.463537303779422,0.38581844092741,0.824171801606613,0.294397840268795,0,0.532427418478012,0.715308569841963,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0,0.814824683075171,0.561142271657738,0.118635018124174,0,0,0.464810523557898,0.385813221962283,0.499621155875892,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,8.00564605337773,16.8946466582,16.3845168425395,1.88339765048055,1.99430397488341,9.0736386863539,6.46910977900581,0,0.404950534779652,0.699561878128147,0.788655413395594,0.274228867211478,0,0.255129870453209,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,7.25362142011344,2.35265659399725,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.414758449233911,0.135005938331691,0.210324961351382,0,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0.711858403995515,0.186399445825301,0,0,6.95674772884027,0.860423876981386,0,0,0,0.448026887097336,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.753613202763113,0.23517741427141,0.251333182659351,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.324482526135515,0.407357455401265,0.248813941220186,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0.278047249225598,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0.473489471170421,0.787056926989615,0,0.232533944750408,0.536546802799238,0.467061369468678,0.16455984991348,0,0,0.146199987425332,0,0.268412837520744,0,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0.581857461502877,0,0.252946148497029,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0,0.312037673114561,0,0.179397413521912,0.964887042726734,0.184753190166605,0,0.651859905768103,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0.275936746304732,0.321101179975584,0,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0,0.98931751764888,0,0.301564624640779,0.238744688006273,0.656563598980245,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0,0,0.679913719975421,0.279902904647316,0.276399947608848,0,0.316335993581135,0,0,0.209088296014469,0.436725127492355,0.674321731924103,0.165306911450672,0,0,0.621339313086926,1.12738587736838,1.19613236835183,0.66183396182839,2.13896307178452,1.54991788173277,1.520605129417,1.5256441023948,1.3020438484395,1.46803082195995,1.93267296660805,1.44015003128933,0,0,0,0,0.537080087002444,0,0.240390899039938,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.194915761479505,0.0962118416403295,0.818138315270983,0,0,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.459483751644906,0.476293691283074,0.463537303779422,0.38581844092741,0.824171801606613,0.294397840268795,0,0.532427418478012,0.715308569841963,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0,0.814824683075171,0.561142271657738,0.118635018124174,0,0,0.464810523557898,0.385813221962283,0.499621155875892,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr10:39089366..39089401,- | |short_description=p@chr10:39089366..39089401,- | ||
}} | }} |
Latest revision as of 08:34, 4 August 2015
Short description: | p@chr10:39089366..39089401, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:39089366..39089401, - |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 2.71e-26 | 14 |
male reproductive organ | 1.92e-24 | 15 |
male organism | 8.00e-23 | 16 |
male reproductive system | 8.00e-23 | 16 |
external genitalia | 2.15e-21 | 17 |
indifferent external genitalia | 2.15e-21 | 17 |
indifferent gonad | 2.15e-21 | 17 |
gonad | 4.01e-20 | 18 |
gonad primordium | 4.01e-20 | 18 |
reproductive organ | 1.02e-14 | 24 |
reproductive structure | 1.82e-13 | 26 |
reproductive system | 1.82e-13 | 26 |
connective tissue | 1.85e-09 | 46 |
body cavity | 5.24e-09 | 37 |
body cavity or lining | 5.24e-09 | 37 |
body cavity precursor | 9.92e-09 | 38 |
anatomical cavity | 1.82e-08 | 39 |
mesoderm | 6.85e-08 | 120 |
mesoderm-derived structure | 6.85e-08 | 120 |
presumptive mesoderm | 6.85e-08 | 120 |
primordium | 9.86e-07 | 134 |