Personal tools

FFCP PHASE1:Mm9::chr19:5489046..5489058,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr19:5489046..5489058,- |short_description=p@chr19:5489046..5489058,- |description=CAGE_peak_at_chr19:5489046..5489058,- |association_with_transcript=NA |Entr...")
 
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:5489046..5489058,-
|DHSsupport=NA
|short_description=p@chr19:5489046..5489058,-
|DPIdataset=NA
|description=CAGE_peak_at_chr19:5489046..5489058,-
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr19:5489046..5489058,-
|description=CAGE_peak_at_chr19:5489046..5489058,-
|id=chr19:5489046..5489058,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002250,7.20e-18,3;CL:0000066,4.67e-17,25;CL:0002563,2.08e-15,9;CL:0002251,2.08e-15,9;CL:0000223,5.01e-13,20;CL:0002076,6.43e-13,15;CL:0000197,2.30e-12,2;CL:0002491,2.30e-12,2;CL:0000098,2.30e-12,2;CL:0002321,8.92e-10,70;CL:0000075,1.29e-07,7;CL:0000710,3.59e-07,1;CL:0002077,3.59e-07,1;CL:0005014,3.59e-07,1;CL:0002315,3.59e-07,1;CL:0002490,3.59e-07,1;CL:0000213,4.10e-07,1;CL:0002078,4.10e-07,1;CL:0000115,4.10e-07,1;CL:0002262,4.10e-07,1;CL:1000398,4.10e-07,1;CL:0002374,7.89e-07,1;CL:0000202,7.89e-07,1;CL:0000199,7.89e-07,1;CL:0000855,7.89e-07,1;CL:0000589,7.89e-07,1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000485,2.55e-24,11;UBERON:0003350,2.08e-15,9;UBERON:0004808,2.08e-15,9;UBERON:0001277,2.08e-15,9;UBERON:0004766,2.30e-12,2;UBERON:0008193,2.30e-12,2;UBERON:0005913,2.30e-12,2;UBERON:0011158,2.30e-12,2;UBERON:0005744,2.30e-12,2;UBERON:0003457,2.30e-12,2;UBERON:0008001,2.30e-12,2;UBERON:0007497,2.30e-12,2;UBERON:0009955,2.30e-12,2;UBERON:0003067,2.30e-12,2;UBERON:0002546,2.30e-12,2;UBERON:0007914,2.30e-12,2;UBERON:0005253,2.30e-12,2;UBERON:0002227,2.30e-12,2;UBERON:0001846,2.30e-12,2;UBERON:0004339,2.30e-12,2;UBERON:0002105,2.30e-12,2;UBERON:0001678,2.30e-12,2;UBERON:0003128,2.30e-12,2;UBERON:0001694,2.30e-12,2;UBERON:0004681,2.30e-12,2;UBERON:0001839,2.30e-12,2;UBERON:0001690,2.30e-12,2;UBERON:0001844,2.30e-12,2;UBERON:0001849,2.30e-12,2;UBERON:0002499,2.30e-12,2;UBERON:0001855,2.30e-12,2;UBERON:0011137,2.30e-12,2;UBERON:0001703,2.30e-12,2;UBERON:0010323,2.30e-12,2;UBERON:0003129,2.30e-12,2;UBERON:0003069,2.30e-12,2;UBERON:0003051,2.30e-12,2;UBERON:0004637,2.30e-12,2;UBERON:0004761,2.30e-12,2;UBERON:0010113,2.30e-12,2;UBERON:0009123,2.30e-12,2;UBERON:0010351,2.30e-12,2;UBERON:0009617,2.30e-12,2;UBERON:0005641,2.30e-12,2;UBERON:0010349,2.30e-12,2;UBERON:0001242,1.20e-10,13;UBERON:0001262,1.20e-10,13;UBERON:0004786,1.20e-10,13;UBERON:0000344,3.27e-09,15;UBERON:0000490,8.29e-09,66;UBERON:0000058,6.14e-08,7;UBERON:0000013,6.43e-08,3;UBERON:0002394,4.10e-07,1;UBERON:0001281,4.10e-07,1;UBERON:0000353,4.10e-07,1;UBERON:0003497,4.10e-07,1;UBERON:0003909,4.10e-07,1;UBERON:0003928,4.10e-07,1;UBERON:0003835,4.10e-07,1;UBERON:0003513,4.10e-07,1;UBERON:0001280,4.10e-07,1;UBERON:0004647,4.10e-07,1;UBERON:0002294,4.10e-07,1;UBERON:0001173,4.10e-07,1;UBERON:0004912,4.10e-07,1;UBERON:0005171,4.10e-07,1;UBERON:0003929,4.13e-07,55
|phase1_expression=1.76163731815273,0,0,0,0.500895729946347,1.51091344720701,1.16806320297763,0.258246646883153,0.140788722151667,0.936258105287974,1.71217968225505,2.23362045186942,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0,0,0.680346321208558,0.496454756004426,0.783599367416806,0,0.45881856213434,0,0,0.430942465371778,0,0,0,0,0,0,2.59966457776147,1.82858109894342,4.49172583777212,0,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0.304130793658544,0.550640256485045,0.782391344348039,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,1.43752564364972,0.335565212115473,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0,0,0,0.244981598429908,0.191690942036473,0,0,0.255374676170375,0,0,0.274462930807229,0,0.279182999001381,0,0,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,2.6087803983151,0,0,0,0,0,0,0.852151612890289,0.519572009205738,0.35333957451034,4.08445917352373,1.28326477414318,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0,0,0.323533699894818,0,0.484875253135222,0,0,0.209446706813455,0,0.239630249011841,0,0.127070227073065,0.149790639404823,0,0.628271760564322,0,0,0,0.162241263067758,0.101839363850316,0.373220911830279,0,0,0.260240885925407,0,0,0.150704817835715,0,0.2562274405697,0.187403449119458,0,0.862271971731369,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0.51469581422943,0,0,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0.898819408654221,0,0,0.948339504765408,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0.472905432318573,0,0.318909537314974,0.655453258862952,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0.504941854408746,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0.404810701674894,1.16902343164525,1.18586333383957,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0.164549020602121,0,0.469343416127421,0.42366414172764,0,0.49465875882444,0,0.241251699712623,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0.509935289981566,0.419854356970974,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,5.6369293868419,0.149516546043979,0.165458490457098,0,0.516639293910924,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0,2.30424005006292,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.604957110821043,0.194915761479505,0.384847366561318,0.584384510907845,0,0,0.0897138566094757,0.503653849092235,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0.679020569229309,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.499621155875892,0.467863216890817,0,0.382576664137687,0,0
|phase1_expression=1.76163731815273,0,0,0,0.500895729946347,1.51091344720701,1.16806320297763,0.258246646883153,0.140788722151667,0.936258105287974,1.71217968225505,2.23362045186942,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0,0,0.680346321208558,0.496454756004426,0.783599367416806,0,0.45881856213434,0,0,0.430942465371778,0,0,0,0,0,0,2.59966457776147,1.82858109894342,4.49172583777212,0,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0.304130793658544,0.550640256485045,0.782391344348039,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,1.43752564364972,0.335565212115473,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0,0,0,0.244981598429908,0.191690942036473,0,0,0.255374676170375,0,0,0.274462930807229,0,0.279182999001381,0,0,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,2.6087803983151,0,0,0,0,0,0,0.852151612890289,0.519572009205738,0.35333957451034,4.08445917352373,1.28326477414318,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0,0,0.323533699894818,0,0.484875253135222,0,0,0.209446706813455,0,0.239630249011841,0,0.127070227073065,0.149790639404823,0,0.628271760564322,0,0,0,0.162241263067758,0.101839363850316,0.373220911830279,0,0,0.260240885925407,0,0,0.150704817835715,0,0.2562274405697,0.187403449119458,0,0.862271971731369,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0.51469581422943,0,0,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0.898819408654221,0,0,0.948339504765408,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0.472905432318573,0,0.318909537314974,0.655453258862952,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0.504941854408746,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0.404810701674894,1.16902343164525,1.18586333383957,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0.164549020602121,0,0.469343416127421,0.42366414172764,0,0.49465875882444,0,0.241251699712623,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0.509935289981566,0.419854356970974,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,5.6369293868419,0.149516546043979,0.165458490457098,0,0.516639293910924,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0,2.30424005006292,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.604957110821043,0.194915761479505,0.384847366561318,0.584384510907845,0,0,0.0897138566094757,0.503653849092235,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0.679020569229309,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.499621155875892,0.467863216890817,0,0.382576664137687,0,0
|short_description=p@chr19:5489046..5489058,-
}}
}}

Latest revision as of 08:28, 4 August 2015

Short description:p@chr19:5489046..5489058, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr19:5489046..5489058, -
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr19:5489046..5489058-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal crypt stem cell7.20e-183
epithelial cell4.67e-1725
intestinal epithelial cell2.08e-159
epithelial cell of alimentary canal2.08e-159
endodermal cell5.01e-1320
endo-epithelial cell6.43e-1315
receptor cell2.30e-122
auditory epithelial cell2.30e-122
sensory epithelial cell2.30e-122
embryonic cell8.92e-1070
columnar/cuboidal epithelial cell1.29e-077
neurecto-epithelial cell3.59e-071
ecto-epithelial cell3.59e-071
auditory epithelial support cell3.59e-071
supporting cell of cochlea3.59e-071
organ of Corti supporting cell3.59e-071
lining cell4.10e-071
meso-epithelial cell4.10e-071
endothelial cell4.10e-071
endothelial cell of sinusoid4.10e-071
endothelial cell of hepatic sinusoid4.10e-071
ear hair cell7.89e-071
auditory hair cell7.89e-071
mechanoreceptor cell7.89e-071
sensory hair cell7.89e-071
cochlear inner hair cell7.89e-071

Uber anatomy
Ontology termp-valuen
simple columnar epithelium2.55e-2411
epithelium of mucosa2.08e-159
gastrointestinal system epithelium2.08e-159
intestinal epithelium2.08e-159
cranial bone2.30e-122
pneumatized bone2.30e-122
zone of bone organ2.30e-122
primary subdivision of skull2.30e-122
cranial conduit2.30e-122
head bone2.30e-122
irregular bone2.30e-122
developing epithelial placode2.30e-122
neurogenic placode2.30e-122
dorsolateral placode2.30e-122
cranial placode2.30e-122
head or neck bone2.30e-122
head mesenchyme2.30e-122
spiral organ of cochlea2.30e-122
internal ear2.30e-122
calvarium2.30e-122
vestibulo-auditory system2.30e-122
temporal bone2.30e-122
cranium2.30e-122
petrous part of temporal bone2.30e-122
vestibular system2.30e-122
bony labyrinth2.30e-122
ear2.30e-122
cochlea2.30e-122
membranous labyrinth2.30e-122
cochlear labyrinth2.30e-122
cochlear duct of membranous labyrinth2.30e-122
axial skeletal system2.30e-122
neurocranium2.30e-122
cranial skeletal system2.30e-122
skull2.30e-122
otic placode2.30e-122
ear vesicle2.30e-122
otic capsule2.30e-122
cartilaginous neurocranium2.30e-122
future membranous labyrinth2.30e-122
otic cup2.30e-122
otic capsule cartilage condensation2.30e-122
head paraxial mesoderm2.30e-122
otocyst epithelium2.30e-122
otic capsule pre-cartilage condensation2.30e-122
intestinal mucosa1.20e-1013
wall of intestine1.20e-1013
gastrointestinal system mucosa1.20e-1013
mucosa3.27e-0915
unilaminar epithelium8.29e-0966
duct6.14e-087
sympathetic nervous system6.43e-083
bile duct4.10e-071
hepatic sinusoid4.10e-071
parenchyma4.10e-071
abdomen blood vessel4.10e-071
sinusoid4.10e-071
digestive system duct4.10e-071
abdominal segment blood vessel4.10e-071
trunk blood vessel4.10e-071
liver parenchyma4.10e-071
liver lobule4.10e-071
biliary system4.10e-071
biliary tree4.10e-071
biliary bud4.10e-071
hepatic duct4.10e-071
gut epithelium4.13e-0755
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:5489046..5489058,-&oldid=3756853"