FFCP PHASE1:Mm9::chr10:36855821..36855858,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:36855821..36855858,- | |||
|description=CAGE_peak_at_chr10:36855821..36855858,- | |description=CAGE_peak_at_chr10:36855821..36855858,- | ||
|id=chr10:36855821..36855858,- | |id=chr10:36855821..36855858,- | ||
|ontology_enrichment_celltype=CL:0000117!2.82e-11!23;CL:0000337!2.82e-11!23;CL:0000393!5.84e-10!39;CL:0000211!5.84e-10!39;CL:0000055!3.76e-09!50;CL:0000221!6.71e-08!44;CL:0000133!6.71e-08!44;CL:0002319!1.36e-07!43;CL:0000540!1.66e-07!33;CL:0000047!1.66e-07!33;CL:0000031!1.66e-07!33;CL:0000404!1.66e-07!33 | |ontology_enrichment_celltype=CL:0000117!2.82e-11!23;CL:0000337!2.82e-11!23;CL:0000393!5.84e-10!39;CL:0000211!5.84e-10!39;CL:0000055!3.76e-09!50;CL:0000221!6.71e-08!44;CL:0000133!6.71e-08!44;CL:0002319!1.36e-07!43;CL:0000540!1.66e-07!33;CL:0000047!1.66e-07!33;CL:0000031!1.66e-07!33;CL:0000404!1.66e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.79e-11,23;CL:0000337,2.79e-11,23;CL:0000393,5.79e-10,39;CL:0000211,5.79e-10,39;CL:0000221,6.67e-08,44;CL:0000133,6.67e-08,44;CL:0002319,1.35e-07,43;CL:0000540,1.65e-07,33;CL:0000047,1.65e-07,33;CL:0000031,1.65e-07,33;CL:0000404,1.65e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.36e-10!34;UBERON:0000073!9.23e-09!75;UBERON:0001016!9.23e-09!75;UBERON:0003056!9.30e-09!49;UBERON:0001017!9.77e-09!73;UBERON:0005743!9.77e-09!73;UBERON:0004121!2.14e-08!102;UBERON:0000924!2.14e-08!102;UBERON:0006601!2.14e-08!102;UBERON:0002346!3.40e-08!71;UBERON:0003075!3.40e-08!71;UBERON:0007284!3.40e-08!71;UBERON:0001049!1.10e-07!52;UBERON:0005068!1.10e-07!52;UBERON:0006241!1.10e-07!52;UBERON:0007135!1.10e-07!52;UBERON:0002780!1.32e-07!39;UBERON:0001890!1.32e-07!39;UBERON:0006240!1.32e-07!39;UBERON:0000468!1.50e-07!333;UBERON:0000033!1.57e-07!63;UBERON:0003080!2.83e-07!40;UBERON:0002791!4.90e-07!29;UBERON:0003528!4.90e-07!29;UBERON:0001893!4.90e-07!29;UBERON:0000922!4.98e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.29e-10,34;UBERON:0000073,7.75e-09,54;UBERON:0001016,9.17e-09,75;UBERON:0003056,9.23e-09,49;UBERON:0001017,9.69e-09,73;UBERON:0004121,2.02e-08,95;UBERON:0000924,2.02e-08,95;UBERON:0006601,2.02e-08,95;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0010314,4.14e-08,92;UBERON:0010371,7.75e-08,73;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0002780,1.31e-07,39;UBERON:0001890,1.31e-07,39;UBERON:0006240,1.31e-07,39;UBERON:0003080,2.81e-07,40;UBERON:0003528,4.87e-07,29;UBERON:0002791,4.87e-07,29;UBERON:0001893,4.87e-07,29 | |||
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| ||
|short_description=p@chr10:36855821..36855858,- | |short_description=p@chr10:36855821..36855858,- | ||
}} | }} |
Latest revision as of 08:20, 4 August 2015
Short description: | p@chr10:36855821..36855858, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:36855821..36855858, - |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.79e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.79e-11 | 23 |
electrically responsive cell | 5.79e-10 | 39 |
electrically active cell | 5.79e-10 | 39 |
ectodermal cell | 6.67e-08 | 44 |
neurectodermal cell | 6.67e-08 | 44 |
neural cell | 1.35e-07 | 43 |
neuron | 1.65e-07 | 33 |
neuronal stem cell | 1.65e-07 | 33 |
neuroblast | 1.65e-07 | 33 |
electrically signaling cell | 1.65e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 8.29e-10 | 34 |
regional part of nervous system | 7.75e-09 | 54 |
nervous system | 9.17e-09 | 75 |
pre-chordal neural plate | 9.23e-09 | 49 |
central nervous system | 9.69e-09 | 73 |
ectoderm-derived structure | 2.02e-08 | 95 |
ectoderm | 2.02e-08 | 95 |
presumptive ectoderm | 2.02e-08 | 95 |
neurectoderm | 2.08e-08 | 64 |
neural plate | 2.08e-08 | 64 |
presumptive neural plate | 2.08e-08 | 64 |
structure with developmental contribution from neural crest | 4.14e-08 | 92 |
ecto-epithelium | 7.75e-08 | 73 |
neural tube | 1.09e-07 | 52 |
neural rod | 1.09e-07 | 52 |
future spinal cord | 1.09e-07 | 52 |
neural keel | 1.09e-07 | 52 |
regional part of forebrain | 1.31e-07 | 39 |
forebrain | 1.31e-07 | 39 |
future forebrain | 1.31e-07 | 39 |
anterior neural tube | 2.81e-07 | 40 |
brain grey matter | 4.87e-07 | 29 |
regional part of telencephalon | 4.87e-07 | 29 |
telencephalon | 4.87e-07 | 29 |