FFCP PHASE1:Mm9::chr3:95124914..95124936,+: Difference between revisions
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{{FFCP|EntrezGene=76893|HGNC=|MCL_coexpression_id=111|UniProt=|association_with_transcript=50bp_to_uc008qjk.1_5end|description=CAGE_peak_8_at_Lass2_5end|id=chr3:95124914..95124936,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,5.26e-10,4;CL:0000766,5.26e-10,4;CL:0000234,5.26e-10,4;CL:0000576,5.26e-10,4;CL:0000235,5.26e-10,4;CL:0000864,5.26e-10,4;CL:0002009,5.26e-10,4;CL:0000040,5.26e-10,4;CL:0000559,5.26e-10,4;CL:0000182,9.03e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!4.99e-11!66;UBERON:0005172!1.20e-09!49;UBERON:0005173!1.20e-09!49;UBERON:0002417!1.20e-09!49;UBERON:0000916!1.20e-09!49;UBERON:0000926!4.23e-07!193;UBERON:0004120!4.23e-07!193;UBERON:0006603!4.23e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.15e-09,49;UBERON:0005173,4.15e-09,49;UBERON:0002417,4.15e-09,49;UBERON:0000916,4.15e-09,49;UBERON:0003104,1.18e-08,61;UBERON:0009142,1.18e-08,61;UBERON:0002107,1.47e-08,22;UBERON:0007499,1.47e-08,22;UBERON:0006925,1.47e-08,22;UBERON:0009497,1.47e-08,22;UBERON:0000015,1.47e-08,22;UBERON:0002423,1.47e-08,22;UBERON:0006235,1.47e-08,22;UBERON:0008835,1.47e-08,22;UBERON:0003894,1.47e-08,22;UBERON:0004161,1.47e-08,22;UBERON:0008836,1.47e-08,22;UBERON:0005256,1.88e-08,45;UBERON:0009854,4.08e-08,23;UBERON:0009856,4.08e-08,23;UBERON:0009569,4.85e-08,66;UBERON:0002365,2.46e-07,25;UBERON:0002330,2.46e-07,25;UBERON:0002100,2.57e-07,90|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0,0.159544317990673,0,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0,0,0.17008658030214,0,0,0.319984845586813,0,0,0,0.430942465371778,0.950117097281869,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0.588231488031014,0,0,0.755380907853464,1.21652317463417,1.10128051297009,1.56478268869608,0.218025156380447,0.659058548203415,0.58328969722285,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0,1.03134418455488,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,1.19840044207362,1.15265491596466,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0,0.287536413054709,0,0,0,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0,0,0.37863096666592,0.151143120213571,0.289864488701678,0.860423876981386,6.11974200336975,1.07940638327563,3.24888208723835,1.34408066129201,0.280888840263504,0.340860645156116,0,0,0,0,0,0,0,0.506719730950197,0,1.59857431606684,0.258937883647172,0.445326417194474,0,0.304465478312141,1.15307748628029,0.301445281105245,1.52865319276416,0.251333182659351,1.48316980640624,0.722996784599558,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,1.46612694769419,2.55457055208591,0.838705871541442,0,0,0,0,0,0,0,0,0.324482526135515,0.407357455401265,0.746441823660558,0.505445516867349,0.210441855886474,0.910843100738926,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.187403449119458,0,0,0.567318240503458,0.703804496655795,0.876782929710299,0.278047249225598,0,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0,0.467061369468678,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0,0,0.102904612379284,0,0.528901133327089,0,0.232236671860439,0.38660238396628,0.403367049246685,0,0.190225626112559,0.474529061544512,0,0.502670417600539,5.96869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,3.22435431620239,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.561086559122548,0.189709611372772,0.885660887877613,0.31399745568275,1.35736880313981,0.592905254174298,0.500535317148282,1.57247196090562,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,1.15078454980324,3.24270453550071,0,0,14.1413560114031,0,0.505157755894224,0.179397413521912,4.82443521363367,0.369506380333209,0,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,1.56106918286239,0.630540576424764,1.55025282754142,0.797273843287435,0.163863314715738,0.690739927463582,0.723245292907558,1.50791283939272,1.08781136763742,0,0,0,0.117211686592203,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0,1.41940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0,0.713475270408282,0.329098041204242,0,0.938686832254841,0,0,0,0.484393280087717,0.180938774784468,0.238744688006273,0.328281799490123,1.1659233465194,0,0.854354403989263,0.82554747185289,0.185194527369712,0.188368457004691,4.37421528707281,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0,0,0.330613822901344,0.26175594198403,0.388844919875379,0.621339313086926,0,1.19613236835183,0.330916980914195,0.388902376688095,0,0.168956125490778,0.821500670520278,0.13020438484395,0.629156066554265,0.241584120826006,0.288030006257865,0.948033361884535,0.405450430580328,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0.706765149637033,0.685861259894999,0.100826185136841,0.487289403698762,0.192423683280659,0.350630706544707,0,0.887943813496259,0.62799699626633,0.503653849092235,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.578719832943424,0.499621155875892,0,3.22306581072447,1.14772999241306,0.220591419119515,0.231867835620421|short_description=p8@Lass2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76893 | |||
|HGNC= | |||
|MCL_coexpression_id=111 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=50bp_to_uc008qjk.1_5end | |||
|cluster_id=chr3:95124914..95124936,+ | |||
|description=CAGE_peak_8_at_Lass2_5end | |||
|id=chr3:95124914..95124936,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.26e-10,4;CL:0000766,5.26e-10,4;CL:0000234,5.26e-10,4;CL:0000576,5.26e-10,4;CL:0000235,5.26e-10,4;CL:0000864,5.26e-10,4;CL:0002009,5.26e-10,4;CL:0000040,5.26e-10,4;CL:0000559,5.26e-10,4;CL:0000182,9.03e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!4.99e-11!66;UBERON:0005172!1.20e-09!49;UBERON:0005173!1.20e-09!49;UBERON:0002417!1.20e-09!49;UBERON:0000916!1.20e-09!49;UBERON:0000926!4.23e-07!193;UBERON:0004120!4.23e-07!193;UBERON:0006603!4.23e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.15e-09,49;UBERON:0005173,4.15e-09,49;UBERON:0002417,4.15e-09,49;UBERON:0000916,4.15e-09,49;UBERON:0003104,1.18e-08,61;UBERON:0009142,1.18e-08,61;UBERON:0002107,1.47e-08,22;UBERON:0007499,1.47e-08,22;UBERON:0006925,1.47e-08,22;UBERON:0009497,1.47e-08,22;UBERON:0000015,1.47e-08,22;UBERON:0002423,1.47e-08,22;UBERON:0006235,1.47e-08,22;UBERON:0008835,1.47e-08,22;UBERON:0003894,1.47e-08,22;UBERON:0004161,1.47e-08,22;UBERON:0008836,1.47e-08,22;UBERON:0005256,1.88e-08,45;UBERON:0009854,4.08e-08,23;UBERON:0009856,4.08e-08,23;UBERON:0009569,4.85e-08,66;UBERON:0002365,2.46e-07,25;UBERON:0002330,2.46e-07,25;UBERON:0002100,2.57e-07,90 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0,0.159544317990673,0,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0,0,0.17008658030214,0,0,0.319984845586813,0,0,0,0.430942465371778,0.950117097281869,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0.588231488031014,0,0,0.755380907853464,1.21652317463417,1.10128051297009,1.56478268869608,0.218025156380447,0.659058548203415,0.58328969722285,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0,1.03134418455488,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,1.19840044207362,1.15265491596466,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0,0.287536413054709,0,0,0,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0,0,0.37863096666592,0.151143120213571,0.289864488701678,0.860423876981386,6.11974200336975,1.07940638327563,3.24888208723835,1.34408066129201,0.280888840263504,0.340860645156116,0,0,0,0,0,0,0,0.506719730950197,0,1.59857431606684,0.258937883647172,0.445326417194474,0,0.304465478312141,1.15307748628029,0.301445281105245,1.52865319276416,0.251333182659351,1.48316980640624,0.722996784599558,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,1.46612694769419,2.55457055208591,0.838705871541442,0,0,0,0,0,0,0,0,0.324482526135515,0.407357455401265,0.746441823660558,0.505445516867349,0.210441855886474,0.910843100738926,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.187403449119458,0,0,0.567318240503458,0.703804496655795,0.876782929710299,0.278047249225598,0,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0,0.467061369468678,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0,0,0.102904612379284,0,0.528901133327089,0,0.232236671860439,0.38660238396628,0.403367049246685,0,0.190225626112559,0.474529061544512,0,0.502670417600539,5.96869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,3.22435431620239,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.561086559122548,0.189709611372772,0.885660887877613,0.31399745568275,1.35736880313981,0.592905254174298,0.500535317148282,1.57247196090562,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,1.15078454980324,3.24270453550071,0,0,14.1413560114031,0,0.505157755894224,0.179397413521912,4.82443521363367,0.369506380333209,0,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,1.56106918286239,0.630540576424764,1.55025282754142,0.797273843287435,0.163863314715738,0.690739927463582,0.723245292907558,1.50791283939272,1.08781136763742,0,0,0,0.117211686592203,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0,1.41940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0,0.713475270408282,0.329098041204242,0,0.938686832254841,0,0,0,0.484393280087717,0.180938774784468,0.238744688006273,0.328281799490123,1.1659233465194,0,0.854354403989263,0.82554747185289,0.185194527369712,0.188368457004691,4.37421528707281,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0,0,0.330613822901344,0.26175594198403,0.388844919875379,0.621339313086926,0,1.19613236835183,0.330916980914195,0.388902376688095,0,0.168956125490778,0.821500670520278,0.13020438484395,0.629156066554265,0.241584120826006,0.288030006257865,0.948033361884535,0.405450430580328,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0.706765149637033,0.685861259894999,0.100826185136841,0.487289403698762,0.192423683280659,0.350630706544707,0,0.887943813496259,0.62799699626633,0.503653849092235,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.578719832943424,0.499621155875892,0,3.22306581072447,1.14772999241306,0.220591419119515,0.231867835620421 | |||
|short_description=p8@Lass2 | |||
}} |
Revision as of 08:15, 4 August 2015
Short description: | p8@Lass2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Lass2_5end |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | 50bp_to_uc008qjk.1_5end |
EntrezGene: | 76893 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.26e-10 | 4 |
myeloid leukocyte | 5.26e-10 | 4 |
phagocyte | 5.26e-10 | 4 |
monocyte | 5.26e-10 | 4 |
macrophage | 5.26e-10 | 4 |
tissue-resident macrophage | 5.26e-10 | 4 |
macrophage dendritic cell progenitor | 5.26e-10 | 4 |
monoblast | 5.26e-10 | 4 |
promonocyte | 5.26e-10 | 4 |
hepatocyte | 9.03e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 4.15e-09 | 49 |
abdominal segment element | 4.15e-09 | 49 |
abdominal segment of trunk | 4.15e-09 | 49 |
abdomen | 4.15e-09 | 49 |
mesenchyme | 1.18e-08 | 61 |
entire embryonic mesenchyme | 1.18e-08 | 61 |
liver | 1.47e-08 | 22 |
epithelial sac | 1.47e-08 | 22 |
digestive gland | 1.47e-08 | 22 |
epithelium of foregut-midgut junction | 1.47e-08 | 22 |
anatomical boundary | 1.47e-08 | 22 |
hepatobiliary system | 1.47e-08 | 22 |
foregut-midgut junction | 1.47e-08 | 22 |
hepatic diverticulum | 1.47e-08 | 22 |
liver primordium | 1.47e-08 | 22 |
septum transversum | 1.47e-08 | 22 |
liver bud | 1.47e-08 | 22 |
trunk mesenchyme | 1.88e-08 | 45 |
digestive tract diverticulum | 4.08e-08 | 23 |
sac | 4.08e-08 | 23 |
subdivision of trunk | 4.85e-08 | 66 |
exocrine gland | 2.46e-07 | 25 |
exocrine system | 2.46e-07 | 25 |
trunk | 2.57e-07 | 90 |