FFCP PHASE1:Mm9::chr3:95032558..95032641,-: Difference between revisions
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{{FFCP|EntrezGene=56772|HGNC=|MCL_coexpression_id=13|UniProt=P97783,Q543U0|association_with_transcript=0bp_to_ENSMUST00000065482,NM_019914,uc008qit.2_5end|description=CAGE_peak_2_at_Mllt11_5end|id=chr3:95032558..95032641,-|ontology_enrichment_celltype=CL:0002319!5.18e-16!43;CL:0000221!1.84e-15!44;CL:0000133!1.84e-15!44;CL:0000540!1.13e-14!33;CL:0000047!1.13e-14!33;CL:0000031!1.13e-14!33;CL:0000404!1.13e-14!33;CL:0000117!1.92e-14!23;CL:0000337!1.92e-14!23;CL:0000055!1.79e-13!50;CL:0000393!6.41e-13!39;CL:0000211!6.41e-13!39|ontology_enrichment_celltype_v019_2=CL:0002319,5.15e-16,43;CL:0000221,1.83e-15,44;CL:0000133,1.83e-15,44;CL:0000540,1.12e-14,33;CL:0000047,1.12e-14,33;CL:0000031,1.12e-14,33;CL:0000404,1.12e-14,33;CL:0000117,1.91e-14,23;CL:0000337,1.91e-14,23;CL:0000393,6.37e-13,39;CL:0000211,6.37e-13,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.22e-30!73;UBERON:0005743!1.22e-30!73;UBERON:0000073!1.43e-30!75;UBERON:0001016!1.43e-30!75;UBERON:0004121!6.13e-25!102;UBERON:0000924!6.13e-25!102;UBERON:0006601!6.13e-25!102;UBERON:0001049!5.11e-24!52;UBERON:0005068!5.11e-24!52;UBERON:0006241!5.11e-24!52;UBERON:0007135!5.11e-24!52;UBERON:0000955!4.20e-23!50;UBERON:0006238!4.20e-23!50;UBERON:0002616!1.37e-22!49;UBERON:0002346!8.60e-22!71;UBERON:0003075!8.60e-22!71;UBERON:0007284!8.60e-22!71;UBERON:0000033!1.71e-20!63;UBERON:0002020!5.69e-19!34;UBERON:0003080!1.83e-17!40;UBERON:0002780!8.80e-17!39;UBERON:0001890!8.80e-17!39;UBERON:0006240!8.80e-17!39;UBERON:0002791!3.84e-16!29;UBERON:0003528!3.84e-16!29;UBERON:0001893!3.84e-16!29;UBERON:0003056!1.15e-15!49;UBERON:0007811!1.69e-14!86;UBERON:0000153!5.12e-13!94;UBERON:0000956!3.04e-11!21;UBERON:0001869!3.04e-11!21;UBERON:0000203!3.04e-11!21;UBERON:0002619!2.08e-09!17;UBERON:0003076!3.50e-07!12;UBERON:0003057!3.50e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-30,73;UBERON:0001016,1.40e-30,75;UBERON:0004121,1.05e-25,95;UBERON:0000924,1.05e-25,95;UBERON:0006601,1.05e-25,95;UBERON:0000073,1.22e-25,54;UBERON:0001049,5.05e-24,52;UBERON:0005068,5.05e-24,52;UBERON:0006241,5.05e-24,52;UBERON:0007135,5.05e-24,52;UBERON:0002346,4.07e-23,64;UBERON:0003075,4.07e-23,64;UBERON:0007284,4.07e-23,64;UBERON:0010314,6.57e-21,92;UBERON:0000955,6.80e-21,47;UBERON:0006238,6.80e-21,47;UBERON:0002616,2.17e-20,46;UBERON:0010371,1.58e-19,73;UBERON:0002020,5.64e-19,34;UBERON:0003080,1.82e-17,40;UBERON:0002780,8.73e-17,39;UBERON:0001890,8.73e-17,39;UBERON:0006240,8.73e-17,39;UBERON:0003528,3.81e-16,29;UBERON:0002791,3.81e-16,29;UBERON:0001893,3.81e-16,29;UBERON:0003056,1.14e-15,49;UBERON:0000956,3.02e-11,21;UBERON:0001869,3.02e-11,21;UBERON:0000203,3.02e-11,21;UBERON:0002619,2.08e-09,17;UBERON:0003076,3.49e-07,12;UBERON:0003057,3.49e-07,12|phase1_expression=3.68342348341026,0.697950815278722,0.909998478779072,0.30246421130683,1.00179145989269,2.68606835059024,1.40167584357315,3.74457637980571,8.30653460694834,6.78787126333781,11.3003859028833,8.93448180747768,6.67682846731702,6.29426897416781,2.33176833270964,2.22722794128809,2.09868563438444,4.57420139769445,3.70208970735495,4.2438965179803,13.5218831340201,4.96454756004426,3.6567970479451,1.11994695955385,0.91763712426868,1.14846392823004,0.430761996159075,1.29282739611533,0.950117097281869,1.00812051903972,2.43903561720835,12.065582795733,7.38077745101484,15.8481681015439,1.1554064790051,3.32469290716985,2.24586291888606,0.418531630736908,2.3440060335714,0.523523743973798,0,0,1.94204141212461,3.02152363141385,4.05507724878058,4.58866880404204,10.1710874765245,9.59310688073965,8.5677611266444,14.387812531497,6.7193482380174,12.9377307928474,4.02678254538567,1.45072428402269,3.6970317905671,4.3734104126111,4.87106847895886,5.15672092277442,32.9775831201144,36.5003775697703,39.9313784208893,5.08266798103698,4.4464739805557,1.7997994345628,6.92206453796882,3.5524005747305,7.19040265244171,6.91592949578798,24.2633692801838,27.8112232963283,25.4493203235172,34.849420097264,36.2224407160646,23.7632150477011,16.9646483702278,35.8495326777908,56.1590993096882,48.3935011342861,48.2324514424605,38.5107960172166,38.8822485310241,37.5057626800867,63.3745407733135,51.7741601229146,40.9499304041851,33.8822873294718,30.3251680102089,27.7735174279698,5.60373830665562,5.81901012822248,2.89864488701678,0,2.719885334831,1.61910957491345,1.94932925234301,0.896053774194671,14.0444420131752,3.2381761289831,2.85764605063156,2.47337702157238,3.23939865486365,2.56652954828636,5.09610479413291,0,10.6080610095495,10.8944742154292,16.6823066854878,4.5673551887624,5.43769555659061,3.71105347662062,3.46970653532272,4.87144765299426,4.15107895060905,6.33035090321015,5.17390311397101,4.77533047052767,2.71914464507811,5.20557684911682,12.3845477272982,10.5148452465816,15.0172232553068,9.69750506270444,0,26.9358333250623,28.9036455402568,1.02182822083437,1.67741174308288,2.99951365496704,1.14363204365758,41.6417977545407,17.8425235099264,30.5340075634261,27.4642425903797,31.1972857943003,41.55760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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56772 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97783,uniprot:Q543U0 | |||
|association_with_transcript=0bp_to_ENSMUST00000065482,NM_019914,uc008qit.2_5end | |||
|cluster_id=chr3:95032558..95032641,- | |||
|description=CAGE_peak_2_at_Mllt11_5end | |||
|id=chr3:95032558..95032641,- | |||
|ontology_enrichment_celltype=CL:0002319!5.18e-16!43;CL:0000221!1.84e-15!44;CL:0000133!1.84e-15!44;CL:0000540!1.13e-14!33;CL:0000047!1.13e-14!33;CL:0000031!1.13e-14!33;CL:0000404!1.13e-14!33;CL:0000117!1.92e-14!23;CL:0000337!1.92e-14!23;CL:0000055!1.79e-13!50;CL:0000393!6.41e-13!39;CL:0000211!6.41e-13!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.15e-16,43;CL:0000221,1.83e-15,44;CL:0000133,1.83e-15,44;CL:0000540,1.12e-14,33;CL:0000047,1.12e-14,33;CL:0000031,1.12e-14,33;CL:0000404,1.12e-14,33;CL:0000117,1.91e-14,23;CL:0000337,1.91e-14,23;CL:0000393,6.37e-13,39;CL:0000211,6.37e-13,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.22e-30!73;UBERON:0005743!1.22e-30!73;UBERON:0000073!1.43e-30!75;UBERON:0001016!1.43e-30!75;UBERON:0004121!6.13e-25!102;UBERON:0000924!6.13e-25!102;UBERON:0006601!6.13e-25!102;UBERON:0001049!5.11e-24!52;UBERON:0005068!5.11e-24!52;UBERON:0006241!5.11e-24!52;UBERON:0007135!5.11e-24!52;UBERON:0000955!4.20e-23!50;UBERON:0006238!4.20e-23!50;UBERON:0002616!1.37e-22!49;UBERON:0002346!8.60e-22!71;UBERON:0003075!8.60e-22!71;UBERON:0007284!8.60e-22!71;UBERON:0000033!1.71e-20!63;UBERON:0002020!5.69e-19!34;UBERON:0003080!1.83e-17!40;UBERON:0002780!8.80e-17!39;UBERON:0001890!8.80e-17!39;UBERON:0006240!8.80e-17!39;UBERON:0002791!3.84e-16!29;UBERON:0003528!3.84e-16!29;UBERON:0001893!3.84e-16!29;UBERON:0003056!1.15e-15!49;UBERON:0007811!1.69e-14!86;UBERON:0000153!5.12e-13!94;UBERON:0000956!3.04e-11!21;UBERON:0001869!3.04e-11!21;UBERON:0000203!3.04e-11!21;UBERON:0002619!2.08e-09!17;UBERON:0003076!3.50e-07!12;UBERON:0003057!3.50e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-30,73;UBERON:0001016,1.40e-30,75;UBERON:0004121,1.05e-25,95;UBERON:0000924,1.05e-25,95;UBERON:0006601,1.05e-25,95;UBERON:0000073,1.22e-25,54;UBERON:0001049,5.05e-24,52;UBERON:0005068,5.05e-24,52;UBERON:0006241,5.05e-24,52;UBERON:0007135,5.05e-24,52;UBERON:0002346,4.07e-23,64;UBERON:0003075,4.07e-23,64;UBERON:0007284,4.07e-23,64;UBERON:0010314,6.57e-21,92;UBERON:0000955,6.80e-21,47;UBERON:0006238,6.80e-21,47;UBERON:0002616,2.17e-20,46;UBERON:0010371,1.58e-19,73;UBERON:0002020,5.64e-19,34;UBERON:0003080,1.82e-17,40;UBERON:0002780,8.73e-17,39;UBERON:0001890,8.73e-17,39;UBERON:0006240,8.73e-17,39;UBERON:0003528,3.81e-16,29;UBERON:0002791,3.81e-16,29;UBERON:0001893,3.81e-16,29;UBERON:0003056,1.14e-15,49;UBERON:0000956,3.02e-11,21;UBERON:0001869,3.02e-11,21;UBERON:0000203,3.02e-11,21;UBERON:0002619,2.08e-09,17;UBERON:0003076,3.49e-07,12;UBERON:0003057,3.49e-07,12 | |||
|phase1_expression=3.68342348341026,0.697950815278722,0.909998478779072,0.30246421130683,1.00179145989269,2.68606835059024,1.40167584357315,3.74457637980571,8.30653460694834,6.78787126333781,11.3003859028833,8.93448180747768,6.67682846731702,6.29426897416781,2.33176833270964,2.22722794128809,2.09868563438444,4.57420139769445,3.70208970735495,4.2438965179803,13.5218831340201,4.96454756004426,3.6567970479451,1.11994695955385,0.91763712426868,1.14846392823004,0.430761996159075,1.29282739611533,0.950117097281869,1.00812051903972,2.43903561720835,12.065582795733,7.38077745101484,15.8481681015439,1.1554064790051,3.32469290716985,2.24586291888606,0.418531630736908,2.3440060335714,0.523523743973798,0,0,1.94204141212461,3.02152363141385,4.05507724878058,4.58866880404204,10.1710874765245,9.59310688073965,8.5677611266444,14.387812531497,6.7193482380174,12.9377307928474,4.02678254538567,1.45072428402269,3.6970317905671,4.3734104126111,4.87106847895886,5.15672092277442,32.9775831201144,36.5003775697703,39.9313784208893,5.08266798103698,4.4464739805557,1.7997994345628,6.92206453796882,3.5524005747305,7.19040265244171,6.91592949578798,24.2633692801838,27.8112232963283,25.4493203235172,34.849420097264,36.2224407160646,23.7632150477011,16.9646483702278,35.8495326777908,56.1590993096882,48.3935011342861,48.2324514424605,38.5107960172166,38.8822485310241,37.5057626800867,63.3745407733135,51.7741601229146,40.9499304041851,33.8822873294718,30.3251680102089,27.7735174279698,5.60373830665562,5.81901012822248,2.89864488701678,0,2.719885334831,1.61910957491345,1.94932925234301,0.896053774194671,14.0444420131752,3.2381761289831,2.85764605063156,2.47337702157238,3.23939865486365,2.56652954828636,5.09610479413291,0,10.6080610095495,10.8944742154292,16.6823066854878,4.5673551887624,5.43769555659061,3.71105347662062,3.46970653532272,4.87144765299426,4.15107895060905,6.33035090321015,5.17390311397101,4.77533047052767,2.71914464507811,5.20557684911682,12.3845477272982,10.5148452465816,15.0172232553068,9.69750506270444,0,26.9358333250623,28.9036455402568,1.02182822083437,1.67741174308288,2.99951365496704,1.14363204365758,41.6417977545407,17.8425235099264,30.5340075634261,27.4642425903797,31.1972857943003,41.557608911912,34.0706652442291,2.74966282395854,6.09594155989456,4.80173241023982,3.99839526184301,2.86264974517948,5.9774547152703,5.40186389416048,4.52114453507145,4.49040894398764,6.40568601424249,6.27801554550183,4.9153640440413,2.15567992932842,3.40390944302075,3.51902248327898,5.91828477554452,3.05851974148158,3.48252166522167,4.11564272815887,2.9855140022774,2.80885274925294,1.02939162845886,2.55747149456033,4.55676699578104,4.22146907965973,3.96136535214233,4.49814997611899,4.32881309844288,2.31400669331067,5.58081467400979,4.29237442239391,6.18856314545998,7.89887279584706,8.20837320395476,8.10688095458557,7.60239934611728,9.00155472693308,6.97873377553933,22.0804445992334,33.7527128604053,0.330418782983798,1.05780226665418,2.77274725695804,3.25131340604614,2.06187938115349,2.01683524623343,2.66853652613844,1.71203063501303,0.474529061544512,1.31759163779209,0.754005626400808,0.994782360205754,1.75467678407208,3.59527763461689,1.94524244887225,1.7922714592893,3.60369011810855,2.85621281524322,5.63538678365402,3.05476991767971,1.93952487167626,1.8936671370386,2.40298841072178,2.21415221969403,2.04098346193787,2.34454611451421,2.07516838961004,3.33690211432188,1.57247196090562,2.02375901146368,1.42002084971952,1.92941727801933,2.5462585178142,1.43848068725405,0.810676133875177,0.823684239564244,2.87536413054709,2.23284568601102,1.87222603868736,1.26289438973556,0.717589654087649,0.964887042726734,3.51031061316549,3.7898282354097,1.95557971730431,3.73439188705414,2.81628297946203,2.51259386162724,2.85652369063216,3.90267295715598,3.4679731703362,0.8858587585951,5.42146213435456,2.94953966488328,3.45369963731791,2.89298117163023,0,2.17562273527484,6.88469982226651,1.93155722413313,41.9037039868137,39.1487033217959,2.78689407140348,40.647819279904,11.6738041184015,10.1514073517126,10.3403230911743,4.77937595905104,8.68914828921337,5.09537755419898,7.2865926301481,13.151513606009,8.69633111482352,24.7417413644791,4.25820255624806,4.45164009168138,2.93196526836437,3.95928295134085,7.96470830039777,3.39892890616974,6.34879469625977,2.82907619633847,3.83892460745005,4.61152721915891,2.58428293168221,2.90826983582004,3.92147116223193,1.8962205476149,2.10837217149998,4.12542172992747,10.8940673841212,3.6012218806262,4.91562998374467,4.07240366560025,7.62563004661776,8.02659679209317,9.21474515371877,7.00269382963578,3.75474732901937,5.2958017715955,4.85162475720916,8.73897140589844,3.39075296061402,3.43783672090488,2.38744688006273,2.9545361954111,1.1659233465194,35.9725085900389,1.87957968877638,2.06386867963222,1.29636169158798,1.50694765603753,2.1871076435364,1.83022538565218,1.01987057996313,1.6794174278839,2.07299960706636,5.72802370809068,3.32152793260192,4.67634774391752,3.02414954301044,4.59994251231831,4.58561383866973,2.697286927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| |||
|short_description=p2@Mllt11 | |||
}} |
Revision as of 08:00, 4 August 2015
Short description: | p2@Mllt11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mllt11_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000065482, NM_019914, uc008qit.2_5end |
EntrezGene: | 56772 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.15e-16 | 43 |
ectodermal cell | 1.83e-15 | 44 |
neurectodermal cell | 1.83e-15 | 44 |
neuron | 1.12e-14 | 33 |
neuronal stem cell | 1.12e-14 | 33 |
neuroblast | 1.12e-14 | 33 |
electrically signaling cell | 1.12e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.91e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-14 | 23 |
electrically responsive cell | 6.37e-13 | 39 |
electrically active cell | 6.37e-13 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.20e-30 | 73 |
nervous system | 1.40e-30 | 75 |
ectoderm-derived structure | 1.05e-25 | 95 |
ectoderm | 1.05e-25 | 95 |
presumptive ectoderm | 1.05e-25 | 95 |
regional part of nervous system | 1.22e-25 | 54 |
neural tube | 5.05e-24 | 52 |
neural rod | 5.05e-24 | 52 |
future spinal cord | 5.05e-24 | 52 |
neural keel | 5.05e-24 | 52 |
neurectoderm | 4.07e-23 | 64 |
neural plate | 4.07e-23 | 64 |
presumptive neural plate | 4.07e-23 | 64 |
structure with developmental contribution from neural crest | 6.57e-21 | 92 |
brain | 6.80e-21 | 47 |
future brain | 6.80e-21 | 47 |
regional part of brain | 2.17e-20 | 46 |
ecto-epithelium | 1.58e-19 | 73 |
gray matter | 5.64e-19 | 34 |
anterior neural tube | 1.82e-17 | 40 |
regional part of forebrain | 8.73e-17 | 39 |
forebrain | 8.73e-17 | 39 |
future forebrain | 8.73e-17 | 39 |
brain grey matter | 3.81e-16 | 29 |
regional part of telencephalon | 3.81e-16 | 29 |
telencephalon | 3.81e-16 | 29 |
pre-chordal neural plate | 1.14e-15 | 49 |
cerebral cortex | 3.02e-11 | 21 |
cerebral hemisphere | 3.02e-11 | 21 |
pallium | 3.02e-11 | 21 |
regional part of cerebral cortex | 2.08e-09 | 17 |
posterior neural tube | 3.49e-07 | 12 |
chordal neural plate | 3.49e-07 | 12 |