FFCP PHASE1:Mm9::chr8:88364776..88364856,-: Difference between revisions
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{{FFCP|EntrezGene=71927|HGNC=|MCL_coexpression_id=240|UniProt=Q99KW9|association_with_transcript=0bp_to_ENSMUST00000034140,NM_028007,uc009mqf.2_5end|description=CAGE_peak_1_at_Itfg1_5end|id=chr8:88364776..88364856,-|ontology_enrichment_celltype=CL:0000117!4.49e-10!23;CL:0000337!4.49e-10!23;CL:0000393!3.02e-09!39;CL:0000211!3.02e-09!39;CL:0000540!1.34e-07!33;CL:0000047!1.34e-07!33;CL:0000031!1.34e-07!33;CL:0000404!1.34e-07!33;CL:0002321!1.83e-07!70;CL:0000220!1.83e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,4.49e-10,23;CL:0000337,4.49e-10,23;CL:0000393,3.02e-09,39;CL:0000211,3.02e-09,39;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33;CL:0002321,1.83e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.10e-16!34;UBERON:0001049!3.66e-16!52;UBERON:0005068!3.66e-16!52;UBERON:0006241!3.66e-16!52;UBERON:0007135!3.66e-16!52;UBERON:0000955!1.75e-15!50;UBERON:0006238!1.75e-15!50;UBERON:0000073!5.43e-15!75;UBERON:0001016!5.43e-15!75;UBERON:0002616!5.82e-15!49;UBERON:0002791!2.02e-14!29;UBERON:0003528!2.02e-14!29;UBERON:0001893!2.02e-14!29;UBERON:0001017!2.52e-14!73;UBERON:0005743!2.52e-14!73;UBERON:0002346!2.67e-14!71;UBERON:0003075!2.67e-14!71;UBERON:0007284!2.67e-14!71;UBERON:0000033!1.08e-13!63;UBERON:0004121!2.68e-13!102;UBERON:0000924!2.68e-13!102;UBERON:0006601!2.68e-13!102;UBERON:0003080!6.36e-13!40;UBERON:0002780!2.35e-12!39;UBERON:0001890!2.35e-12!39;UBERON:0006240!2.35e-12!39;UBERON:0003056!7.62e-11!49;UBERON:0000956!3.27e-10!21;UBERON:0001869!3.27e-10!21;UBERON:0000203!3.27e-10!21;UBERON:0007023!8.40e-10!51;UBERON:0002619!7.62e-09!17;UBERON:0004111!3.91e-08!122;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10;UBERON:0000025!2.31e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.83e-17,54;UBERON:0002020,1.10e-16,34;UBERON:0001049,3.66e-16,52;UBERON:0005068,3.66e-16,52;UBERON:0006241,3.66e-16,52;UBERON:0007135,3.66e-16,52;UBERON:0001016,5.43e-15,75;UBERON:0003528,2.02e-14,29;UBERON:0002791,2.02e-14,29;UBERON:0001893,2.02e-14,29;UBERON:0001017,2.52e-14,73;UBERON:0002346,4.62e-14,64;UBERON:0003075,4.62e-14,64;UBERON:0007284,4.62e-14,64;UBERON:0000955,8.39e-14,47;UBERON:0006238,8.39e-14,47;UBERON:0002616,2.70e-13,46;UBERON:0003080,6.36e-13,40;UBERON:0004121,8.70e-13,95;UBERON:0000924,8.70e-13,95;UBERON:0006601,8.70e-13,95;UBERON:0002780,2.35e-12,39;UBERON:0001890,2.35e-12,39;UBERON:0006240,2.35e-12,39;UBERON:0010371,2.73e-12,73;UBERON:0003056,7.62e-11,49;UBERON:0000956,3.27e-10,21;UBERON:0001869,3.27e-10,21;UBERON:0000203,3.27e-10,21;UBERON:0010314,4.17e-10,92;UBERON:0007023,8.40e-10,51;UBERON:0002619,7.62e-09,17;UBERON:0004111,3.91e-08,122;UBERON:0002021,6.12e-08,10;UBERON:0000411,6.12e-08,10;UBERON:0001950,6.12e-08,10;UBERON:0000025,2.31e-07,114|phase1_expression=36.0334905985786,91.0825813938732,106.469822017151,70.4741612344914,83.64958690104,42.9770936094438,48.1242039626783,25.3081713945489,10.98152032783,9.59664557920173,15.923271044972,15.7948874810766,26.7073138692681,25.8764391160232,13.9906099962578,15.1856450542369,6.29605690315332,21.293696161681,23.8579114473985,27.1609377150739,49.8353680285269,17.0780436065523,17.2391860831697,64.6369388085363,86.7167082433903,105.084449433049,81.4140172740651,65.5032547365103,78.289648816026,73.0887376303799,62.0845429834853,10.7955214488137,7.99584223859941,0,19.3530585233354,19.7819227976606,21.6419517638111,42.6902263351646,33.5974198145234,49.7347556775108,61.7643062432565,49.1792749170081,57.7757320107073,47.9666876486949,46.5320114297572,46.0702347925821,25.0365230191373,22.6746162635664,29.2182623036848,56.1902408324679,28.557230011574,21.5628846547457,18.2883040602933,27.5637613964311,17.4768775554081,79.2359062990717,79.3697628630356,76.8351417493389,57.4578748841258,64.536899471188,54.5095007015314,15.5868484751801,22.2323699027785,20.2477436388315,21.7550599764734,17.0515227587064,13.4820049733282,17.28982373947,59.7252166896831,53.3273456410178,56.5774146035218,60.2723577092026,60.5179802207421,65.0426143831406,49.6479539874464,49.6378144769411,103.508928139425,116.067790319436,121.656374338945,66.2069164405573,71.1773867226747,65.6350846901518,110.556467604547,118.180148106653,115.515475319268,111.369605309046,101.653380090559,94.5045190334274,52.8568829465625,65.2182563721559,33.0445517119913,90.3445070830456,45.5580793584193,70.701118104554,83.1713814333016,66.3079792904057,57.3013234137548,44.6527445154511,41.565760736459,44.5207863883029,46.0557982669745,43.6310023208681,40.7688383530633,14.2213340630666,42.6487350792092,46.8715751128932,44.4861511613009,60.7458240105399,34.697676408721,51.0640958382997,28.9720495699447,37.4492538323934,43.355713484139,47.3269091335235,41.1560474974967,47.3763049312877,41.2815596116404,44.8258006451726,28.307537662396,28.3091987407966,26.0592991783264,30.0622656943838,50.325775528893,79.0508151931177,61.1584383895289,38.0631012260801,17.8524535513821,13.797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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71927 | |||
|HGNC= | |||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99KW9 | |||
|association_with_transcript=0bp_to_ENSMUST00000034140,NM_028007,uc009mqf.2_5end | |||
|cluster_id=chr8:88364776..88364856,- | |||
|description=CAGE_peak_1_at_Itfg1_5end | |||
|id=chr8:88364776..88364856,- | |||
|ontology_enrichment_celltype=CL:0000117!4.49e-10!23;CL:0000337!4.49e-10!23;CL:0000393!3.02e-09!39;CL:0000211!3.02e-09!39;CL:0000540!1.34e-07!33;CL:0000047!1.34e-07!33;CL:0000031!1.34e-07!33;CL:0000404!1.34e-07!33;CL:0002321!1.83e-07!70;CL:0000220!1.83e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.49e-10,23;CL:0000337,4.49e-10,23;CL:0000393,3.02e-09,39;CL:0000211,3.02e-09,39;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33;CL:0002321,1.83e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.10e-16!34;UBERON:0001049!3.66e-16!52;UBERON:0005068!3.66e-16!52;UBERON:0006241!3.66e-16!52;UBERON:0007135!3.66e-16!52;UBERON:0000955!1.75e-15!50;UBERON:0006238!1.75e-15!50;UBERON:0000073!5.43e-15!75;UBERON:0001016!5.43e-15!75;UBERON:0002616!5.82e-15!49;UBERON:0002791!2.02e-14!29;UBERON:0003528!2.02e-14!29;UBERON:0001893!2.02e-14!29;UBERON:0001017!2.52e-14!73;UBERON:0005743!2.52e-14!73;UBERON:0002346!2.67e-14!71;UBERON:0003075!2.67e-14!71;UBERON:0007284!2.67e-14!71;UBERON:0000033!1.08e-13!63;UBERON:0004121!2.68e-13!102;UBERON:0000924!2.68e-13!102;UBERON:0006601!2.68e-13!102;UBERON:0003080!6.36e-13!40;UBERON:0002780!2.35e-12!39;UBERON:0001890!2.35e-12!39;UBERON:0006240!2.35e-12!39;UBERON:0003056!7.62e-11!49;UBERON:0000956!3.27e-10!21;UBERON:0001869!3.27e-10!21;UBERON:0000203!3.27e-10!21;UBERON:0007023!8.40e-10!51;UBERON:0002619!7.62e-09!17;UBERON:0004111!3.91e-08!122;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10;UBERON:0000025!2.31e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.83e-17,54;UBERON:0002020,1.10e-16,34;UBERON:0001049,3.66e-16,52;UBERON:0005068,3.66e-16,52;UBERON:0006241,3.66e-16,52;UBERON:0007135,3.66e-16,52;UBERON:0001016,5.43e-15,75;UBERON:0003528,2.02e-14,29;UBERON:0002791,2.02e-14,29;UBERON:0001893,2.02e-14,29;UBERON:0001017,2.52e-14,73;UBERON:0002346,4.62e-14,64;UBERON:0003075,4.62e-14,64;UBERON:0007284,4.62e-14,64;UBERON:0000955,8.39e-14,47;UBERON:0006238,8.39e-14,47;UBERON:0002616,2.70e-13,46;UBERON:0003080,6.36e-13,40;UBERON:0004121,8.70e-13,95;UBERON:0000924,8.70e-13,95;UBERON:0006601,8.70e-13,95;UBERON:0002780,2.35e-12,39;UBERON:0001890,2.35e-12,39;UBERON:0006240,2.35e-12,39;UBERON:0010371,2.73e-12,73;UBERON:0003056,7.62e-11,49;UBERON:0000956,3.27e-10,21;UBERON:0001869,3.27e-10,21;UBERON:0000203,3.27e-10,21;UBERON:0010314,4.17e-10,92;UBERON:0007023,8.40e-10,51;UBERON:0002619,7.62e-09,17;UBERON:0004111,3.91e-08,122;UBERON:0002021,6.12e-08,10;UBERON:0000411,6.12e-08,10;UBERON:0001950,6.12e-08,10;UBERON:0000025,2.31e-07,114 | |||
|phase1_expression=36.0334905985786,91.0825813938732,106.469822017151,70.4741612344914,83.64958690104,42.9770936094438,48.1242039626783,25.3081713945489,10.98152032783,9.59664557920173,15.923271044972,15.7948874810766,26.7073138692681,25.8764391160232,13.9906099962578,15.1856450542369,6.29605690315332,21.293696161681,23.8579114473985,27.1609377150739,49.8353680285269,17.0780436065523,17.2391860831697,64.6369388085363,86.7167082433903,105.084449433049,81.4140172740651,65.5032547365103,78.289648816026,73.0887376303799,62.0845429834853,10.7955214488137,7.99584223859941,0,19.3530585233354,19.7819227976606,21.6419517638111,42.6902263351646,33.5974198145234,49.7347556775108,61.7643062432565,49.1792749170081,57.7757320107073,47.9666876486949,46.5320114297572,46.0702347925821,25.0365230191373,22.6746162635664,29.2182623036848,56.1902408324679,28.557230011574,21.5628846547457,18.2883040602933,27.5637613964311,17.4768775554081,79.2359062990717,79.3697628630356,76.8351417493389,57.4578748841258,64.536899471188,54.5095007015314,15.5868484751801,22.2323699027785,20.2477436388315,21.7550599764734,17.0515227587064,13.4820049733282,17.28982373947,59.7252166896831,53.3273456410178,56.5774146035218,60.2723577092026,60.5179802207421,65.0426143831406,49.6479539874464,49.6378144769411,103.508928139425,116.067790319436,121.656374338945,66.2069164405573,71.1773867226747,65.6350846901518,110.556467604547,118.180148106653,115.515475319268,111.369605309046,101.653380090559,94.5045190334274,52.8568829465625,65.2182563721559,33.0445517119913,90.3445070830456,45.5580793584193,70.701118104554,83.1713814333016,66.3079792904057,57.3013234137548,44.6527445154511,41.565760736459,44.5207863883029,46.0557982669745,43.6310023208681,40.7688383530633,14.2213340630666,42.6487350792092,46.8715751128932,44.4861511613009,60.7458240105399,34.697676408721,51.0640958382997,28.9720495699447,37.4492538323934,43.355713484139,47.3269091335235,41.1560474974967,47.3763049312877,41.2815596116404,44.8258006451726,28.307537662396,28.3091987407966,26.0592991783264,30.0622656943838,50.325775528893,79.0508151931177,61.1584383895289,38.0631012260801,17.8524535513821,13.7977628128484,14.8672165675486,119.083558326834,168.360221837255,126.659586929767,135.93061839036,143.712087019646,119.685913666307,120.383017196276,22.9138568663212,27.3695335342205,27.0413351524032,60.396812639418,24.8530046058764,28.0480567408837,34.5719289226271,30.7437828384859,30.8885706147028,35.7437279594731,41.7909691536391,47.0840134745008,17.6765754204931,26.8530633838303,26.2167175004284,24.9883134967435,27.2486304241086,28.2084254882955,29.6326276427439,29.457071489137,20.3641824320838,17.2423097766859,17.3339734631312,25.6835957944022,32.3645962773913,34.3918537390538,28.6461130058104,29.3178705303632,29.9278199001514,21.3931229170375,19.3156849007726,24.6374872394728,22.7092592880603,28.7293062138417,27.1580511978617,32.0177972461478,29.2001653337097,33.0147790150515,112.715412430372,110.313744470593,87.5609774907065,61.6169820326058,24.9547253126224,24.6170872172065,24.2270827285535,30.050845168878,28.9091456998331,44.1323452581137,40.3349702312835,45.951008367999,39.9622981992429,44.9641626813001,44.4518118631594,31.4586793028978,47.7665090223074,52.3741548658986,17.6391147886366,26.3914064128474,27.0498565615393,28.3075345704987,34.5235427158374,28.2647354157984,39.6493087769093,54.0253141605344,72.6904109905565,71.8171494024879,75.0025146530487,19.0203420516347,25.3561103696032,23.8353839127945,27.9946967516134,27.2530190520231,32.3374831762403,28.7696137450811,25.7795010572306,31.8491239298175,27.3159592401974,39.4469404528614,41.8130481973511,46.4745135422686,57.9453645675776,84.4276162385893,46.5578039219844,27.4762547067203,27.5410810187024,29.5356449248827,23.9384053254272,30.8211513692941,35.9445897737881,24.9771069257982,35.3102722797868,32.5553093783699,37.1529610971945,38.0162890140512,35.2277363006427,34.5711250009813,66.3481649332798,50.0393229113213,49.1764273019036,36.6995872585294,125.06890960049,124.713234534104,34.4263385291018,35.0934588814078,40.3850520852809,43.7291393612235,37.2682478077742,34.4115069051675,32.9742037641943,38.4984081872812,33.1944775373413,31.2713767965104,31.6230222357219,96.0750736101203,41.0206846251896,19.0530195923963,22.4784003907935,33.8188752093698,65.0451177865818,25.734747432428,25.0928552280743,36.0235702333765,31.5973025382427,39.9665692327106,32.8203932323641,34.8992380298405,25.6678112436999,32.2357493094532,52.7093042874994,57.7559042189846,61.9600082471894,29.1698972330723,16.5579115241926,27.2208034490122,41.6749549059343,36.2088699732203,48.8710591188299,27.7063103694285,37.5474732901937,55.7118346371847,47.4136055818168,34.6261131177108,28.0948102450876,29.0708298153711,24.2325858326367,30.8584891520715,32.0628920292836,123.493251138999,26.8267282852629,22.7025554759545,23.3345104485837,16.1996873024034,21.0509110690379,20.590035588587,14.10820968949,18.4735917067229,15.0637971446822,55.3708958448766,18.9801596148681,25.82157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| |||
|short_description=p1@Itfg1 | |||
}} |
Revision as of 07:09, 4 August 2015
Short description: | p1@Itfg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Itfg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 0bp_to_ENSMUST00000034140, NM_028007, uc009mqf.2_5end |
EntrezGene: | 71927 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.49e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.49e-10 | 23 |
electrically responsive cell | 3.02e-09 | 39 |
electrically active cell | 3.02e-09 | 39 |
neuron | 1.34e-07 | 33 |
neuronal stem cell | 1.34e-07 | 33 |
neuroblast | 1.34e-07 | 33 |
electrically signaling cell | 1.34e-07 | 33 |
embryonic cell | 1.83e-07 | 70 |