FFCP PHASE1:Mm9::chr16:96689316..96689332,+: Difference between revisions
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{{FFCP|EntrezGene=18546|HGNC=|MCL_coexpression_id=251|UniProt=P63054|association_with_transcript=103bp_to_ENSMUST00000061739,NM_008791,uc008adc.1_5end|description=CAGE_peak_1_at_Pcp4_5end|id=chr16:96689316..96689332,+|ontology_enrichment_celltype=CL:0000117!1.83e-09!23;CL:0000337!1.83e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-09,23;CL:0000337,1.35e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.04e-22!63;UBERON:0002346!3.41e-21!71;UBERON:0003075!3.41e-21!71;UBERON:0007284!3.41e-21!71;UBERON:0004121!3.41e-20!102;UBERON:0000924!3.41e-20!102;UBERON:0006601!3.41e-20!102;UBERON:0001017!2.49e-19!73;UBERON:0005743!2.49e-19!73;UBERON:0001049!3.13e-19!52;UBERON:0005068!3.13e-19!52;UBERON:0006241!3.13e-19!52;UBERON:0007135!3.13e-19!52;UBERON:0000073!8.20e-19!75;UBERON:0001016!8.20e-19!75;UBERON:0000955!1.00e-18!50;UBERON:0006238!1.00e-18!50;UBERON:0002616!4.89e-18!49;UBERON:0003056!3.99e-16!49;UBERON:0002020!2.83e-14!34;UBERON:0003080!7.23e-14!40;UBERON:0002780!2.88e-13!39;UBERON:0001890!2.88e-13!39;UBERON:0006240!2.88e-13!39;UBERON:0002791!8.12e-12!29;UBERON:0003528!8.12e-12!29;UBERON:0001893!8.12e-12!29;UBERON:0007811!8.25e-12!86;UBERON:0000153!7.10e-11!94;UBERON:0000956!6.52e-08!21;UBERON:0001869!6.52e-08!21;UBERON:0000203!6.52e-08!21;UBERON:0002021!2.44e-07!10;UBERON:0000411!2.44e-07!10;UBERON:0001950!2.44e-07!10;UBERON:0002619!4.35e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.73e-21,64;UBERON:0003075,4.73e-21,64;UBERON:0007284,4.73e-21,64;UBERON:0000073,5.23e-21,54;UBERON:0001049,1.57e-19,52;UBERON:0005068,1.57e-19,52;UBERON:0006241,1.57e-19,52;UBERON:0007135,1.57e-19,52;UBERON:0010371,4.03e-19,73;UBERON:0001017,9.48e-19,73;UBERON:0004121,1.28e-18,95;UBERON:0000924,1.28e-18,95;UBERON:0006601,1.28e-18,95;UBERON:0001016,3.03e-18,75;UBERON:0000955,4.81e-17,47;UBERON:0006238,4.81e-17,47;UBERON:0003056,2.27e-16,49;UBERON:0002616,2.31e-16,46;UBERON:0002020,1.73e-14,34;UBERON:0010314,1.99e-14,92;UBERON:0003080,4.49e-14,40;UBERON:0002780,1.83e-13,39;UBERON:0001890,1.83e-13,39;UBERON:0006240,1.83e-13,39;UBERON:0003528,5.45e-12,29;UBERON:0002791,5.45e-12,29;UBERON:0001893,5.45e-12,29;UBERON:0000956,5.09e-08,21;UBERON:0001869,5.09e-08,21;UBERON:0000203,5.09e-08,21;UBERON:0002021,1.95e-07,10;UBERON:0000411,1.95e-07,10;UBERON:0001950,1.95e-07,10;UBERON:0002619,3.51e-07,17|phase1_expression=1291.76060074727,0,0,0,0,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,3.64455481301687,0,22.555544823114,19.8815928728321,14.004858509335,404.550931248639,0,0,1.75991665072747,0.45881856213434,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0.886922042621219,0,0,0,0.288851619751275,0,0.408338712524738,7.11503772252743,4.6880120671428,9.42342739152837,8.82347232046521,11.6117732442936,9.71020706062307,0,0,0,10.9534788208725,33.3578489262083,7.90870257844099,14.7766723296455,9.65906309215001,7.18762821824858,15.6037823633695,0,0,0,0,0,187.951992138566,255.502642988392,161.627007894076,0,0.889294796111139,0,0,0.7104801149461,70.4060259718251,36.5007390055477,49.6673242957608,48.0621140460819,54.8948149127107,309.074365124915,438.644922329904,41.5243809338694,30.1913233707445,22.9804696652505,611.143139546607,1671.17188085894,1344.21077252539,127.270267659637,185.170990651277,150.543964090904,686.790177543397,602.155992733898,427.071102536184,306.708357478088,478.226475804187,171.673889605102,4.84647637332378,3.85414956544606,0,0,0,2.69851595818909,0,0,77.9466531731223,3.40860645156115,4.1565760736459,1.7666978725517,716.61131982375,15.3991772897181,15.2883143823987,0,0,0,0,58.8046980553159,9.58070169494535,13.0629082377046,26.8902256487511,59.0663027925554,45.4312529594435,60.7412241427069,45.3892409543821,11.5613264023301,0,0.144599356919912,0.884610551949874,1.94120219936891,4.41683036920787,7.75800405016355,113.698974343055,2038.6326895914,2105.98663700929,47.7704693240066,0,0,0,943.980609529193,3453.67205067781,241.130701704587,949.428436890214,1223.85417878296,2099.69819027435,2505.81630808152,0.305518091550949,86.4628445740146,5.05445516867349,108.587997637421,39.4264942176992,37.933847231523,41.0541655956196,60.5833367699575,74.0237110766447,101.97852134674,84.6126572774351,592.430718992346,0.215567992932842,11.535470890237,13.724187684788,6.79506770525482,8.06337022754234,4.179025998266,3.90986059175093,1.59227413454795,0,0,0,1.24275463521301,3.51789089971644,1.44049649168812,1.65721314909647,0.393528463494808,1.07986979021165,0,1.3413670069981,0.467061369468678,1.6455984991348,6.895033491322,4.70199095365963,7.74859933354261,8.78200461164202,3.75777972529041,366.955960244402,108.049842998249,4.29544417878937,43.1054423661577,8.53153002140936,25.5460339046482,31.5725280239129,38.5215532030584,48.4784135581817,54.5947546943045,88.2624054472792,55.8329456514397,97.2667258057043,125.541533857966,132.380615153883,71.9055526923377,88.1843243488753,69.6994456390285,40.2095950020533,64.5504096244968,54.0997131230786,82.4787877773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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18546 | |||
|HGNC= | |||
|MCL_coexpression_id=251 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63054 | |||
|association_with_transcript=103bp_to_ENSMUST00000061739,NM_008791,uc008adc.1_5end | |||
|cluster_id=chr16:96689316..96689332,+ | |||
|description=CAGE_peak_1_at_Pcp4_5end | |||
|id=chr16:96689316..96689332,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.83e-09!23;CL:0000337!1.83e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-09,23;CL:0000337,1.35e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.04e-22!63;UBERON:0002346!3.41e-21!71;UBERON:0003075!3.41e-21!71;UBERON:0007284!3.41e-21!71;UBERON:0004121!3.41e-20!102;UBERON:0000924!3.41e-20!102;UBERON:0006601!3.41e-20!102;UBERON:0001017!2.49e-19!73;UBERON:0005743!2.49e-19!73;UBERON:0001049!3.13e-19!52;UBERON:0005068!3.13e-19!52;UBERON:0006241!3.13e-19!52;UBERON:0007135!3.13e-19!52;UBERON:0000073!8.20e-19!75;UBERON:0001016!8.20e-19!75;UBERON:0000955!1.00e-18!50;UBERON:0006238!1.00e-18!50;UBERON:0002616!4.89e-18!49;UBERON:0003056!3.99e-16!49;UBERON:0002020!2.83e-14!34;UBERON:0003080!7.23e-14!40;UBERON:0002780!2.88e-13!39;UBERON:0001890!2.88e-13!39;UBERON:0006240!2.88e-13!39;UBERON:0002791!8.12e-12!29;UBERON:0003528!8.12e-12!29;UBERON:0001893!8.12e-12!29;UBERON:0007811!8.25e-12!86;UBERON:0000153!7.10e-11!94;UBERON:0000956!6.52e-08!21;UBERON:0001869!6.52e-08!21;UBERON:0000203!6.52e-08!21;UBERON:0002021!2.44e-07!10;UBERON:0000411!2.44e-07!10;UBERON:0001950!2.44e-07!10;UBERON:0002619!4.35e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.73e-21,64;UBERON:0003075,4.73e-21,64;UBERON:0007284,4.73e-21,64;UBERON:0000073,5.23e-21,54;UBERON:0001049,1.57e-19,52;UBERON:0005068,1.57e-19,52;UBERON:0006241,1.57e-19,52;UBERON:0007135,1.57e-19,52;UBERON:0010371,4.03e-19,73;UBERON:0001017,9.48e-19,73;UBERON:0004121,1.28e-18,95;UBERON:0000924,1.28e-18,95;UBERON:0006601,1.28e-18,95;UBERON:0001016,3.03e-18,75;UBERON:0000955,4.81e-17,47;UBERON:0006238,4.81e-17,47;UBERON:0003056,2.27e-16,49;UBERON:0002616,2.31e-16,46;UBERON:0002020,1.73e-14,34;UBERON:0010314,1.99e-14,92;UBERON:0003080,4.49e-14,40;UBERON:0002780,1.83e-13,39;UBERON:0001890,1.83e-13,39;UBERON:0006240,1.83e-13,39;UBERON:0003528,5.45e-12,29;UBERON:0002791,5.45e-12,29;UBERON:0001893,5.45e-12,29;UBERON:0000956,5.09e-08,21;UBERON:0001869,5.09e-08,21;UBERON:0000203,5.09e-08,21;UBERON:0002021,1.95e-07,10;UBERON:0000411,1.95e-07,10;UBERON:0001950,1.95e-07,10;UBERON:0002619,3.51e-07,17 | |||
|phase1_expression=1291.76060074727,0,0,0,0,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,3.64455481301687,0,22.555544823114,19.8815928728321,14.004858509335,404.550931248639,0,0,1.75991665072747,0.45881856213434,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0.886922042621219,0,0,0,0.288851619751275,0,0.408338712524738,7.11503772252743,4.6880120671428,9.42342739152837,8.82347232046521,11.6117732442936,9.71020706062307,0,0,0,10.9534788208725,33.3578489262083,7.90870257844099,14.7766723296455,9.65906309215001,7.18762821824858,15.6037823633695,0,0,0,0,0,187.951992138566,255.502642988392,161.627007894076,0,0.889294796111139,0,0,0.7104801149461,70.4060259718251,36.5007390055477,49.6673242957608,48.0621140460819,54.8948149127107,309.074365124915,438.644922329904,41.5243809338694,30.1913233707445,22.9804696652505,611.143139546607,1671.17188085894,1344.21077252539,127.270267659637,185.170990651277,150.543964090904,686.790177543397,602.155992733898,427.071102536184,306.708357478088,478.226475804187,171.673889605102,4.84647637332378,3.85414956544606,0,0,0,2.69851595818909,0,0,77.9466531731223,3.40860645156115,4.1565760736459,1.7666978725517,716.61131982375,15.3991772897181,15.2883143823987,0,0,0,0,58.8046980553159,9.58070169494535,13.0629082377046,26.8902256487511,59.0663027925554,45.4312529594435,60.7412241427069,45.3892409543821,11.5613264023301,0,0.144599356919912,0.884610551949874,1.94120219936891,4.41683036920787,7.75800405016355,113.698974343055,2038.6326895914,2105.98663700929,47.7704693240066,0,0,0,943.980609529193,3453.67205067781,241.130701704587,949.428436890214,1223.85417878296,2099.69819027435,2505.81630808152,0.305518091550949,86.4628445740146,5.05445516867349,108.587997637421,39.4264942176992,37.933847231523,41.0541655956196,60.5833367699575,74.0237110766447,101.97852134674,84.6126572774351,592.430718992346,0.215567992932842,11.535470890237,13.724187684788,6.79506770525482,8.06337022754234,4.179025998266,3.90986059175093,1.59227413454795,0,0,0,1.24275463521301,3.51789089971644,1.44049649168812,1.65721314909647,0.393528463494808,1.07986979021165,0,1.3413670069981,0.467061369468678,1.6455984991348,6.895033491322,4.70199095365963,7.74859933354261,8.78200461164202,3.75777972529041,366.955960244402,108.049842998249,4.29544417878937,43.1054423661577,8.53153002140936,25.5460339046482,31.5725280239129,38.5215532030584,48.4784135581817,54.5947546943045,88.2624054472792,55.8329456514397,97.2667258057043,125.541533857966,132.380615153883,71.9055526923377,88.1843243488753,69.6994456390285,40.2095950020533,64.5504096244968,54.0997131230786,82.4787877773523,68.4652279701719,47.4819500657457,10.1178459398812,3.54264355151045,4.55296310739987,3.33172342588861,0.296452627087149,0.333690211432188,0.393117990226406,0,0.202860121388503,0,0.763877555344259,0,0,0,0,1.11642284300551,0,0.505157755894224,0.179397413521912,0,2.03228509183265,11.1799932944586,5.70377417547091,3.56464680127895,2.34690248288502,0.670025029767263,1.19021820443007,0.585400943573396,1.89162172927429,0.44292937929755,2.07291199254733,5.24362607090362,2.59027472798843,1.01254341007058,0,0,50.6517201209607,1.10374698521893,621.65188443273,685.571154877796,0,1.26235463602186,3.47059041357882,7.41833614163613,6.89354872744957,0.716906393857656,1.78238939265915,0.849229592366497,0.809621403349789,0.876767573733936,1.58115111178609,1493.50147872856,135.552781373897,1.78065603667255,5.04949573996086,661.69516324284,2.65490276679926,3.39892890616974,3.62788268357701,2.07465587731488,3.54362271456927,7.99331384654211,13.1798429515793,2.54473610634254,1.06949213515416,99.551578749782,0,0,139.580238359053,16.3855595568492,2.71653235943784,17.5756368725906,28.1970971491215,52.6188011926108,73.388863188546,51.1501114512527,12.4376005273766,0,318.66353518942,8.57408515295696,0.322928853391811,0.603129249281559,2.26807453605959,2.46211349617592,97.9375611076298,355.460303954147,1.36696704638282,10.1129565301979,0.925972636848558,1.50694765603753,3.00727300986255,6.17701067657611,0,0.139951452323658,0,108.832450453723,7.27572785236611,18.7053909756701,41.9060722388589,54.9902218518053,71.1861957812539,80.3791504453531,83.5626437383146,62.036158250215,95.9150802359267,152.849471019384,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,0.844780627453891,0.352071715937262,27.8637383566053,0,1.93267296660805,0.576060012515731,2.52808896502543,2.22997736819181,1.33524244314275,1.55904987573354,2.14832034800978,2.58285761215644,1.20195449519969,1.62458479892035,2.82706059854813,2.59103142626999,2.21817607301049,3.99577311032985,3.36741445741153,3.50630706544707,7.9355634265324,0,0,0,360.878161652132,211.518149833482,873.633247754854,184.785542766155,250.284479913646,1169.60106605994,1195.92496444565,1138.91628071752,972.345305700584,670.010704335688,736.509049954958,740.499682754291,656.117993097689,720.496430284885,469.090842447149,18.9930846079043,17.1580695562443,24.4149056228412,34.0349403895612,51.5648380064836,62.3229493645548,5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| |||
|short_description=p1@Pcp4 | |||
}} |
Revision as of 06:44, 4 August 2015
Short description: | p1@Pcp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:251 |
Association with transcript: | 103bp_to_ENSMUST00000061739, NM_008791, uc008adc.1_5end |
EntrezGene: | 18546 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.35e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.35e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.73e-21 | 64 |
neural plate | 4.73e-21 | 64 |
presumptive neural plate | 4.73e-21 | 64 |
regional part of nervous system | 5.23e-21 | 54 |
neural tube | 1.57e-19 | 52 |
neural rod | 1.57e-19 | 52 |
future spinal cord | 1.57e-19 | 52 |
neural keel | 1.57e-19 | 52 |
ecto-epithelium | 4.03e-19 | 73 |
central nervous system | 9.48e-19 | 73 |
ectoderm-derived structure | 1.28e-18 | 95 |
ectoderm | 1.28e-18 | 95 |
presumptive ectoderm | 1.28e-18 | 95 |
nervous system | 3.03e-18 | 75 |
brain | 4.81e-17 | 47 |
future brain | 4.81e-17 | 47 |
pre-chordal neural plate | 2.27e-16 | 49 |
regional part of brain | 2.31e-16 | 46 |
gray matter | 1.73e-14 | 34 |
structure with developmental contribution from neural crest | 1.99e-14 | 92 |
anterior neural tube | 4.49e-14 | 40 |
regional part of forebrain | 1.83e-13 | 39 |
forebrain | 1.83e-13 | 39 |
future forebrain | 1.83e-13 | 39 |
brain grey matter | 5.45e-12 | 29 |
regional part of telencephalon | 5.45e-12 | 29 |
telencephalon | 5.45e-12 | 29 |
cerebral cortex | 5.09e-08 | 21 |
cerebral hemisphere | 5.09e-08 | 21 |
pallium | 5.09e-08 | 21 |
occipital lobe | 1.95e-07 | 10 |
visual cortex | 1.95e-07 | 10 |
neocortex | 1.95e-07 | 10 |
regional part of cerebral cortex | 3.51e-07 | 17 |