FFCP PHASE1:Mm9::chr5:23929334..23929356,-: Difference between revisions
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{{FFCP|EntrezGene=12568|HGNC=|MCL_coexpression_id=1|UniProt=P49615,Q543F6|association_with_transcript=0bp_to_ENSMUST00000030814,NM_007668,uc008wrl.1_5end|description=CAGE_peak_2_at_Cdk5_5end|id=chr5:23929334..23929356,-|ontology_enrichment_celltype=CL:0000221!1.37e-17!44;CL:0000133!1.37e-17!44;CL:0002319!3.24e-17!43;CL:0000055!8.55e-16!50;CL:0000540!2.52e-14!33;CL:0000047!2.52e-14!33;CL:0000031!2.52e-14!33;CL:0000404!2.52e-14!33;CL:0000393!6.91e-14!39;CL:0000211!6.91e-14!39;CL:0000117!2.73e-12!23;CL:0000337!2.73e-12!23|ontology_enrichment_celltype_v019_2=CL:0000221,1.36e-17,44;CL:0000133,1.36e-17,44;CL:0002319,3.24e-17,43;CL:0000540,2.52e-14,33;CL:0000047,2.52e-14,33;CL:0000031,2.52e-14,33;CL:0000404,2.52e-14,33;CL:0000393,6.91e-14,39;CL:0000211,6.91e-14,39;CL:0000117,2.73e-12,23;CL:0000337,2.73e-12,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.53e-34!75;UBERON:0001016!1.53e-34!75;UBERON:0001017!2.12e-34!73;UBERON:0005743!2.12e-34!73;UBERON:0001049!1.55e-25!52;UBERON:0005068!1.55e-25!52;UBERON:0006241!1.55e-25!52;UBERON:0007135!1.55e-25!52;UBERON:0004121!2.35e-25!102;UBERON:0000924!2.35e-25!102;UBERON:0006601!2.35e-25!102;UBERON:0000955!5.69e-24!50;UBERON:0006238!5.69e-24!50;UBERON:0002346!8.95e-24!71;UBERON:0003075!8.95e-24!71;UBERON:0007284!8.95e-24!71;UBERON:0002616!1.61e-23!49;UBERON:0000033!5.68e-22!63;UBERON:0003080!1.22e-18!40;UBERON:0002780!5.01e-18!39;UBERON:0001890!5.01e-18!39;UBERON:0006240!5.01e-18!39;UBERON:0002020!6.29e-18!34;UBERON:0003056!1.02e-17!49;UBERON:0002791!7.06e-15!29;UBERON:0003528!7.06e-15!29;UBERON:0001893!7.06e-15!29;UBERON:0000153!1.48e-13!94;UBERON:0007811!2.09e-12!86;UBERON:0000956!1.54e-10!21;UBERON:0001869!1.54e-10!21;UBERON:0000203!1.54e-10!21;UBERON:0002619!3.10e-09!17;UBERON:0003076!1.87e-07!12;UBERON:0003057!1.87e-07!12;UBERON:0002021!8.65e-07!10;UBERON:0000411!8.65e-07!10;UBERON:0001950!8.65e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.53e-34,75;UBERON:0001017,2.12e-34,73;UBERON:0000073,7.74e-27,54;UBERON:0004121,2.21e-26,95;UBERON:0000924,2.21e-26,95;UBERON:0006601,2.21e-26,95;UBERON:0002346,1.51e-25,64;UBERON:0003075,1.51e-25,64;UBERON:0007284,1.51e-25,64;UBERON:0001049,1.55e-25,52;UBERON:0005068,1.55e-25,52;UBERON:0006241,1.55e-25,52;UBERON:0007135,1.55e-25,52;UBERON:0000955,5.67e-22,47;UBERON:0006238,5.67e-22,47;UBERON:0002616,1.57e-21,46;UBERON:0010371,4.39e-20,73;UBERON:0003080,1.22e-18,40;UBERON:0002780,5.01e-18,39;UBERON:0001890,5.01e-18,39;UBERON:0006240,5.01e-18,39;UBERON:0002020,6.28e-18,34;UBERON:0003056,1.02e-17,49;UBERON:0010314,1.88e-16,92;UBERON:0003528,7.05e-15,29;UBERON:0002791,7.05e-15,29;UBERON:0001893,7.05e-15,29;UBERON:0000956,1.54e-10,21;UBERON:0001869,1.54e-10,21;UBERON:0000203,1.54e-10,21;UBERON:0002619,3.10e-09,17;UBERON:0003076,1.87e-07,12;UBERON:0003057,1.87e-07,12;UBERON:0002021,8.65e-07,10;UBERON:0000411,8.65e-07,10;UBERON:0001950,8.65e-07,10|phase1_expression=12.8119077683835,1.04692622291808,5.0049916332849,3.93203474698879,5.50985302940982,3.02182689441402,4.43864017131499,4.9066862907799,1.12630977721333,1.87251621057595,0.513653904676515,0.558405112967355,4.79362043807376,4.54586092578786,2.33176833270964,3.23960427823721,0.699561878128147,5.36285681109004,3.29074640653773,2.54633791078818,15.9881385484011,10.5248408272938,9.66439219814061,7.03966660290989,3.21172993494038,2.29692785646008,3.87685796543167,5.38678081714723,4.18051522804023,3.52842181663903,4.21287970245079,4.44521471421742,9.22597181376855,0,3.46621943701529,3.15845826181135,3.67504841272264,7.53356935326434,7.813353445238,7.32933241563318,4.70585190424811,6.14740936462601,11.1667381197165,9.4422613481683,10.5432008468295,15.6014739337429,13.3006528539167,19.4042389178597,15.5977189741475,18.4708404120569,13.1587236327841,15.8127820801469,3.52343472721246,8.70434570413613,6.72187598284928,8.2323019531503,8.88253663810146,9.7977697532714,20.8385954685386,23.2756030879694,22.8179305262225,15.5868484751801,15.1180115338894,12.5985960419396,4.94433181283487,7.104801149461,20.6724076257699,27.6637179831519,14.2054768862614,14.9856591548177,17.8776217148675,45.4185065202048,39.977205912242,14.4539143073646,19.456630616702,23.8996884518605,28.6301290598411,36.2632040161933,33.1790111833486,21.4974649000216,26.4399290010964,20.3156214517136,37.4105218661851,33.2029939918691,30.4068513075852,24.4541725943144,27.4777343942269,24.6047268489397,8.5570598466498,15.870027622425,4.92769630792852,2.58127163094416,4.75979933595425,3.77792234146472,5.19821133958135,4.03224198387602,7.72444310724635,11.930122580464,14.8078022623635,11.3068663843309,16.1969932743183,3.84979432242953,0,0,6.27824018932521,4.81383744402687,11.62706223534,6.96521666286266,5.69663344023778,6.53145411885229,8.67426633830679,9.43842982767638,9.68585088475446,10.0984169170257,7.76085467095652,6.91166252313215,7.66304399976559,4.916378135277,7.07688441559899,7.117741397686,3.97514733228708,5.81850303762267,0,15.2246014446005,22.8296910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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12568 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P49615,uniprot:Q543F6 | |||
|association_with_transcript=0bp_to_ENSMUST00000030814,NM_007668,uc008wrl.1_5end | |||
|cluster_id=chr5:23929334..23929356,- | |||
|description=CAGE_peak_2_at_Cdk5_5end | |||
|id=chr5:23929334..23929356,- | |||
|ontology_enrichment_celltype=CL:0000221!1.37e-17!44;CL:0000133!1.37e-17!44;CL:0002319!3.24e-17!43;CL:0000055!8.55e-16!50;CL:0000540!2.52e-14!33;CL:0000047!2.52e-14!33;CL:0000031!2.52e-14!33;CL:0000404!2.52e-14!33;CL:0000393!6.91e-14!39;CL:0000211!6.91e-14!39;CL:0000117!2.73e-12!23;CL:0000337!2.73e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.36e-17,44;CL:0000133,1.36e-17,44;CL:0002319,3.24e-17,43;CL:0000540,2.52e-14,33;CL:0000047,2.52e-14,33;CL:0000031,2.52e-14,33;CL:0000404,2.52e-14,33;CL:0000393,6.91e-14,39;CL:0000211,6.91e-14,39;CL:0000117,2.73e-12,23;CL:0000337,2.73e-12,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.53e-34!75;UBERON:0001016!1.53e-34!75;UBERON:0001017!2.12e-34!73;UBERON:0005743!2.12e-34!73;UBERON:0001049!1.55e-25!52;UBERON:0005068!1.55e-25!52;UBERON:0006241!1.55e-25!52;UBERON:0007135!1.55e-25!52;UBERON:0004121!2.35e-25!102;UBERON:0000924!2.35e-25!102;UBERON:0006601!2.35e-25!102;UBERON:0000955!5.69e-24!50;UBERON:0006238!5.69e-24!50;UBERON:0002346!8.95e-24!71;UBERON:0003075!8.95e-24!71;UBERON:0007284!8.95e-24!71;UBERON:0002616!1.61e-23!49;UBERON:0000033!5.68e-22!63;UBERON:0003080!1.22e-18!40;UBERON:0002780!5.01e-18!39;UBERON:0001890!5.01e-18!39;UBERON:0006240!5.01e-18!39;UBERON:0002020!6.29e-18!34;UBERON:0003056!1.02e-17!49;UBERON:0002791!7.06e-15!29;UBERON:0003528!7.06e-15!29;UBERON:0001893!7.06e-15!29;UBERON:0000153!1.48e-13!94;UBERON:0007811!2.09e-12!86;UBERON:0000956!1.54e-10!21;UBERON:0001869!1.54e-10!21;UBERON:0000203!1.54e-10!21;UBERON:0002619!3.10e-09!17;UBERON:0003076!1.87e-07!12;UBERON:0003057!1.87e-07!12;UBERON:0002021!8.65e-07!10;UBERON:0000411!8.65e-07!10;UBERON:0001950!8.65e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.53e-34,75;UBERON:0001017,2.12e-34,73;UBERON:0000073,7.74e-27,54;UBERON:0004121,2.21e-26,95;UBERON:0000924,2.21e-26,95;UBERON:0006601,2.21e-26,95;UBERON:0002346,1.51e-25,64;UBERON:0003075,1.51e-25,64;UBERON:0007284,1.51e-25,64;UBERON:0001049,1.55e-25,52;UBERON:0005068,1.55e-25,52;UBERON:0006241,1.55e-25,52;UBERON:0007135,1.55e-25,52;UBERON:0000955,5.67e-22,47;UBERON:0006238,5.67e-22,47;UBERON:0002616,1.57e-21,46;UBERON:0010371,4.39e-20,73;UBERON:0003080,1.22e-18,40;UBERON:0002780,5.01e-18,39;UBERON:0001890,5.01e-18,39;UBERON:0006240,5.01e-18,39;UBERON:0002020,6.28e-18,34;UBERON:0003056,1.02e-17,49;UBERON:0010314,1.88e-16,92;UBERON:0003528,7.05e-15,29;UBERON:0002791,7.05e-15,29;UBERON:0001893,7.05e-15,29;UBERON:0000956,1.54e-10,21;UBERON:0001869,1.54e-10,21;UBERON:0000203,1.54e-10,21;UBERON:0002619,3.10e-09,17;UBERON:0003076,1.87e-07,12;UBERON:0003057,1.87e-07,12;UBERON:0002021,8.65e-07,10;UBERON:0000411,8.65e-07,10;UBERON:0001950,8.65e-07,10 | |||
|phase1_expression=12.8119077683835,1.04692622291808,5.0049916332849,3.93203474698879,5.50985302940982,3.02182689441402,4.43864017131499,4.9066862907799,1.12630977721333,1.87251621057595,0.513653904676515,0.558405112967355,4.79362043807376,4.54586092578786,2.33176833270964,3.23960427823721,0.699561878128147,5.36285681109004,3.29074640653773,2.54633791078818,15.9881385484011,10.5248408272938,9.66439219814061,7.03966660290989,3.21172993494038,2.29692785646008,3.87685796543167,5.38678081714723,4.18051522804023,3.52842181663903,4.21287970245079,4.44521471421742,9.22597181376855,0,3.46621943701529,3.15845826181135,3.67504841272264,7.53356935326434,7.813353445238,7.32933241563318,4.70585190424811,6.14740936462601,11.1667381197165,9.4422613481683,10.5432008468295,15.6014739337429,13.3006528539167,19.4042389178597,15.5977189741475,18.4708404120569,13.1587236327841,15.8127820801469,3.52343472721246,8.70434570413613,6.72187598284928,8.2323019531503,8.88253663810146,9.7977697532714,20.8385954685386,23.2756030879694,22.8179305262225,15.5868484751801,15.1180115338894,12.5985960419396,4.94433181283487,7.104801149461,20.6724076257699,27.6637179831519,14.2054768862614,14.9856591548177,17.8776217148675,45.4185065202048,39.977205912242,14.4539143073646,19.456630616702,23.8996884518605,28.6301290598411,36.2632040161933,33.1790111833486,21.4974649000216,26.4399290010964,20.3156214517136,37.4105218661851,33.2029939918691,30.4068513075852,24.4541725943144,27.4777343942269,24.6047268489397,8.5570598466498,15.870027622425,4.92769630792852,2.58127163094416,4.75979933595425,3.77792234146472,5.19821133958135,4.03224198387602,7.72444310724635,11.930122580464,14.8078022623635,11.3068663843309,16.1969932743183,3.84979432242953,0,0,6.27824018932521,4.81383744402687,11.62706223534,6.96521666286266,5.69663344023778,6.53145411885229,8.67426633830679,9.43842982767638,9.68585088475446,10.0984169170257,7.76085467095652,6.91166252313215,7.66304399976559,4.916378135277,7.07688441559899,7.117741397686,3.97514733228708,5.81850303762267,0,15.2246014446005,22.8296910426666,4.59822699375465,4.55297473122497,6.59893004092748,4.82866862877646,30.5572904385838,32.9400434029411,21.6125485634127,33.0266208365325,39.1244649715406,38.0252121543995,44.1296235544301,10.9986512958342,4.97627882440372,10.108910337347,4.41927897361595,14.053007839972,20.0014830857121,10.803727788321,14.9197769657358,9.72921937863988,10.6334387836425,9.18276900685342,6.72628763921441,12.5029435901048,15.695804653929,14.9558455539357,15.1245055375027,12.2340789659263,11.1440693287093,9.67176041117334,17.1169469463904,4.91549231119264,5.66165395652373,5.39910648851626,6.83515049367156,7.03578179943289,5.94204802821349,8.52281048106757,7.28027657465394,6.78775296704464,7.67362017676346,5.633741429392,4.78737903705395,5.10135534731789,7.38753588355929,5.02626619184305,3.80119967305864,3.95190207523891,5.77087600669599,32.3846520788756,15.5385964692719,5.94753809370836,3.96675849995316,15.3567540385368,13.9342003116263,8.24751752461397,8.67239155880373,5.78182913996663,8.3699275489526,5.21981967698963,4.77626968699632,8.04272668160862,6.36660710531683,5.06906626509712,2.69645822596266,8.42938394511308,4.18196673834171,13.0870851657626,10.0538691096561,6.76246414038483,10.1825663922657,10.6673867942194,7.64480436804472,6.70307293517127,5.46157547524528,7.37894020854462,8.76119863844784,6.22550516883013,4.67166296005063,5.50365186316968,4.04751802292737,2.02860121388503,3.61765739628625,3.8193877767213,4.02774592431135,3.08056930872567,2.47105271869273,5.75072826109418,2.97712758134803,3.43241440426017,4.2938409251009,2.87035861635059,5.78932225636041,5.35784251483154,15.9172785887207,10.7556884451737,8.48725428875941,8.91822943496308,9.04533790185805,6.42717830392237,4.48807390072937,6.77831119656621,7.0868700687608,7.97273843287435,5.07976275618788,5.00786447411097,5.35201516751593,4.52373851817817,4.35124547054968,0.983528546038072,4.41498794087572,42.2248051667893,58.4886316095094,11.639381121744,3.7870639080656,15.1443945319803,14.8366722832723,15.5104846367615,16.010909462821,14.2591151412732,13.587673477864,17.0020494703456,14.6127928955656,10.6727700045561,18.6366363524648,10.5035663054119,21.3678724400706,10.750539317336,9.89820737835213,2.65490276679926,9.95400608235424,8.76738315197778,6.41257271170054,5.90603785761546,7.37844355065426,4.9101375701962,3.99887102425256,4.9909632973861,4.42451461110142,7.37930260024991,3.09406629744561,10.2131881726136,15.4852540866927,17.9808570458029,16.289614662401,14.3645589250242,14.2695054081656,14.4803138129866,14.9187825066154,7.27482294997502,14.6164128896036,4.41056796109924,4.61681508236144,5.00539722757307,5.36785031860587,4.41677672811605,4.59594519286172,4.95517422270746,41.5352676503542,3.07567585436135,9.49379592630823,5.92622487583077,2.0720530270516,2.87057878214153,2.0590035588587,3.90950388985867,5.318155188299,4.00779924032829,5.72802370809068,15.0259596951039,9.96265388921559,9.93649135560572,7.94535524854981,7.64268973111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| |||
|short_description=p2@Cdk5 | |||
}} |
Revision as of 05:04, 4 August 2015
Short description: | p2@Cdk5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdk5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000030814, NM_007668, uc008wrl.1_5end |
EntrezGene: | 12568 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.36e-17 | 44 |
neurectodermal cell | 1.36e-17 | 44 |
neural cell | 3.24e-17 | 43 |
neuron | 2.52e-14 | 33 |
neuronal stem cell | 2.52e-14 | 33 |
neuroblast | 2.52e-14 | 33 |
electrically signaling cell | 2.52e-14 | 33 |
electrically responsive cell | 6.91e-14 | 39 |
electrically active cell | 6.91e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.73e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.73e-12 | 23 |