FFCP PHASE1:Mm9::chr19:45092541..45092553,+: Difference between revisions
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{{FFCP|EntrezGene=226154|HGNC=|UniProt=Q91YU6|association_with_transcript=-71bp_to_NM_001130526,uc008hqm.2_5end|description=CAGE_peak_8_at_Lzts2_5end|id=chr19:45092541..45092553,+|ontology_enrichment_celltype=CL:0000221!1.11e-09!44;CL:0000133!1.11e-09!44;CL:0002319!1.96e-09!43;CL:0000055!2.88e-09!50;CL:0000117!9.13e-09!23;CL:0000337!9.13e-09!23;CL:0000393!6.10e-07!39;CL:0000211!6.10e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-13,23;CL:0000337,1.19e-13,23;CL:0002319,3.35e-11,43;CL:0000221,8.50e-11,44;CL:0000133,8.50e-11,44;CL:0000540,4.62e-08,33;CL:0000047,4.62e-08,33;CL:0000031,4.62e-08,33;CL:0000404,4.62e-08,33;CL:0000393,6.65e-07,39;CL:0000211,6.65e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.15e-19!50;UBERON:0006238!1.15e-19!50;UBERON:0002616!1.28e-19!49;UBERON:0001017!1.43e-19!73;UBERON:0005743!1.43e-19!73;UBERON:0000073!1.84e-19!75;UBERON:0001016!1.84e-19!75;UBERON:0004121!3.83e-19!102;UBERON:0000924!3.83e-19!102;UBERON:0006601!3.83e-19!102;UBERON:0001049!1.37e-17!52;UBERON:0005068!1.37e-17!52;UBERON:0006241!1.37e-17!52;UBERON:0007135!1.37e-17!52;UBERON:0000033!4.65e-17!63;UBERON:0003080!1.63e-16!40;UBERON:0002780!2.29e-16!39;UBERON:0001890!2.29e-16!39;UBERON:0006240!2.29e-16!39;UBERON:0002791!9.88e-16!29;UBERON:0003528!9.88e-16!29;UBERON:0001893!9.88e-16!29;UBERON:0002020!1.11e-15!34;UBERON:0002346!4.55e-15!71;UBERON:0003075!4.55e-15!71;UBERON:0007284!4.55e-15!71;UBERON:0003056!3.21e-14!49;UBERON:0000956!5.69e-12!21;UBERON:0001869!5.69e-12!21;UBERON:0000203!5.69e-12!21;UBERON:0002619!4.05e-10!17;UBERON:0007811!1.42e-08!86;UBERON:0000153!2.10e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.13e-27,54;UBERON:0002020,1.15e-26,34;UBERON:0003528,4.03e-26,29;UBERON:0002791,4.03e-26,29;UBERON:0001893,4.03e-26,29;UBERON:0001017,1.81e-23,73;UBERON:0001049,4.39e-23,52;UBERON:0005068,4.39e-23,52;UBERON:0006241,4.39e-23,52;UBERON:0007135,4.39e-23,52;UBERON:0002780,1.29e-22,39;UBERON:0001890,1.29e-22,39;UBERON:0006240,1.29e-22,39;UBERON:0001016,1.66e-22,75;UBERON:0002616,1.79e-22,46;UBERON:0003080,7.98e-22,40;UBERON:0000955,8.73e-22,47;UBERON:0006238,8.73e-22,47;UBERON:0004121,2.34e-18,95;UBERON:0000924,2.34e-18,95;UBERON:0006601,2.34e-18,95;UBERON:0000956,3.00e-18,21;UBERON:0001869,3.00e-18,21;UBERON:0000203,3.00e-18,21;UBERON:0002346,8.43e-17,64;UBERON:0003075,8.43e-17,64;UBERON:0007284,8.43e-17,64;UBERON:0003056,3.45e-16,49;UBERON:0002619,5.94e-16,17;UBERON:0010371,1.13e-15,73;UBERON:0002021,2.24e-10,10;UBERON:0000411,2.24e-10,10;UBERON:0001950,2.24e-10,10;UBERON:0010314,4.59e-10,92;UBERON:0002420,6.11e-09,8;UBERON:0007245,6.11e-09,8;UBERON:0010009,6.11e-09,8;UBERON:0010011,6.11e-09,8;UBERON:0000454,6.11e-09,8;UBERON:0001954,5.17e-07,7;UBERON:0003022,5.17e-07,7;UBERON:0002421,5.17e-07,7;UBERON:0000349,5.17e-07,7;UBERON:0002600,5.17e-07,7|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0.261199789138935,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0.588231488031014,0,0,0.503587271902309,0.506884656097573,0.917733760808408,2.34717403304412,0.65407546914134,1.97717564461025,0.972149495371417,1.25987779462826,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,1.03134418455488,0.809265843438391,0.528990979272033,1.26766280701236,1.0165335962074,0.889294796111139,1.3498495759221,0,2.1314403448383,1.49800055259202,1.15265491596466,1.34796496001021,1.62007125998029,0.841299845405528,0,1.10434270475807,1.95985278743926,1.43768206527355,1.83843757322004,1.10115880999389,2.29837208553338,1.68967186581868,1.05509030184155,1.00636407962651,1.04182674111352,1.3959149950069,1.68828783009504,1.22238598221448,1.17851434189467,1.28134512719193,0.559198337475902,0.454357159999104,0.529000920747499,0.579728977403356,0,0,0,0,0,0.842666520790511,1.36344258062446,1.81850203222008,1.7666978725517,0.845060518660083,5.13305909657271,5.09610479413291,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,1.03909497345377,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0.628332956648377,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.292780797011547,1.04723353406728,0.255457055208591,0.479260498023681,0,0.127070227073065,0.748953197024114,2.28750301409313,1.7591609295801,2.9550134432687,1.27857728665165,1.66230435647648,3.0825839982874,0.712875546952214,0.373220911830279,0.758168275301024,0.420883711772948,0.780722657776222,0,0.180062129805349,0.60281927134286,0.272145996605311,0.384341160854549,0.655912071918102,0.517406741478031,0.215567992932842,0.945530400839096,1.05570674498369,0.657587197282725,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0,0.469052119962192,0.900310307305074,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.467061369468678,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226154 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91YU6 | |||
|association_with_transcript=-71bp_to_NM_001130526,uc008hqm.2_5end | |||
|cluster_id=chr19:45092541..45092553,+ | |||
|description=CAGE_peak_8_at_Lzts2_5end | |||
|id=chr19:45092541..45092553,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.11e-09!44;CL:0000133!1.11e-09!44;CL:0002319!1.96e-09!43;CL:0000055!2.88e-09!50;CL:0000117!9.13e-09!23;CL:0000337!9.13e-09!23;CL:0000393!6.10e-07!39;CL:0000211!6.10e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-13,23;CL:0000337,1.19e-13,23;CL:0002319,3.35e-11,43;CL:0000221,8.50e-11,44;CL:0000133,8.50e-11,44;CL:0000540,4.62e-08,33;CL:0000047,4.62e-08,33;CL:0000031,4.62e-08,33;CL:0000404,4.62e-08,33;CL:0000393,6.65e-07,39;CL:0000211,6.65e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.15e-19!50;UBERON:0006238!1.15e-19!50;UBERON:0002616!1.28e-19!49;UBERON:0001017!1.43e-19!73;UBERON:0005743!1.43e-19!73;UBERON:0000073!1.84e-19!75;UBERON:0001016!1.84e-19!75;UBERON:0004121!3.83e-19!102;UBERON:0000924!3.83e-19!102;UBERON:0006601!3.83e-19!102;UBERON:0001049!1.37e-17!52;UBERON:0005068!1.37e-17!52;UBERON:0006241!1.37e-17!52;UBERON:0007135!1.37e-17!52;UBERON:0000033!4.65e-17!63;UBERON:0003080!1.63e-16!40;UBERON:0002780!2.29e-16!39;UBERON:0001890!2.29e-16!39;UBERON:0006240!2.29e-16!39;UBERON:0002791!9.88e-16!29;UBERON:0003528!9.88e-16!29;UBERON:0001893!9.88e-16!29;UBERON:0002020!1.11e-15!34;UBERON:0002346!4.55e-15!71;UBERON:0003075!4.55e-15!71;UBERON:0007284!4.55e-15!71;UBERON:0003056!3.21e-14!49;UBERON:0000956!5.69e-12!21;UBERON:0001869!5.69e-12!21;UBERON:0000203!5.69e-12!21;UBERON:0002619!4.05e-10!17;UBERON:0007811!1.42e-08!86;UBERON:0000153!2.10e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.13e-27,54;UBERON:0002020,1.15e-26,34;UBERON:0003528,4.03e-26,29;UBERON:0002791,4.03e-26,29;UBERON:0001893,4.03e-26,29;UBERON:0001017,1.81e-23,73;UBERON:0001049,4.39e-23,52;UBERON:0005068,4.39e-23,52;UBERON:0006241,4.39e-23,52;UBERON:0007135,4.39e-23,52;UBERON:0002780,1.29e-22,39;UBERON:0001890,1.29e-22,39;UBERON:0006240,1.29e-22,39;UBERON:0001016,1.66e-22,75;UBERON:0002616,1.79e-22,46;UBERON:0003080,7.98e-22,40;UBERON:0000955,8.73e-22,47;UBERON:0006238,8.73e-22,47;UBERON:0004121,2.34e-18,95;UBERON:0000924,2.34e-18,95;UBERON:0006601,2.34e-18,95;UBERON:0000956,3.00e-18,21;UBERON:0001869,3.00e-18,21;UBERON:0000203,3.00e-18,21;UBERON:0002346,8.43e-17,64;UBERON:0003075,8.43e-17,64;UBERON:0007284,8.43e-17,64;UBERON:0003056,3.45e-16,49;UBERON:0002619,5.94e-16,17;UBERON:0010371,1.13e-15,73;UBERON:0002021,2.24e-10,10;UBERON:0000411,2.24e-10,10;UBERON:0001950,2.24e-10,10;UBERON:0010314,4.59e-10,92;UBERON:0002420,6.11e-09,8;UBERON:0007245,6.11e-09,8;UBERON:0010009,6.11e-09,8;UBERON:0010011,6.11e-09,8;UBERON:0000454,6.11e-09,8;UBERON:0001954,5.17e-07,7;UBERON:0003022,5.17e-07,7;UBERON:0002421,5.17e-07,7;UBERON:0000349,5.17e-07,7;UBERON:0002600,5.17e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0.261199789138935,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0.588231488031014,0,0,0.503587271902309,0.506884656097573,0.917733760808408,2.34717403304412,0.65407546914134,1.97717564461025,0.972149495371417,1.25987779462826,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,1.03134418455488,0.809265843438391,0.528990979272033,1.26766280701236,1.0165335962074,0.889294796111139,1.3498495759221,0,2.1314403448383,1.49800055259202,1.15265491596466,1.34796496001021,1.62007125998029,0.841299845405528,0,1.10434270475807,1.95985278743926,1.43768206527355,1.83843757322004,1.10115880999389,2.29837208553338,1.68967186581868,1.05509030184155,1.00636407962651,1.04182674111352,1.3959149950069,1.68828783009504,1.22238598221448,1.17851434189467,1.28134512719193,0.559198337475902,0.454357159999104,0.529000920747499,0.579728977403356,0,0,0,0,0,0.842666520790511,1.36344258062446,1.81850203222008,1.7666978725517,0.845060518660083,5.13305909657271,5.09610479413291,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,1.03909497345377,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0.628332956648377,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.292780797011547,1.04723353406728,0.255457055208591,0.479260498023681,0,0.127070227073065,0.748953197024114,2.28750301409313,1.7591609295801,2.9550134432687,1.27857728665165,1.66230435647648,3.0825839982874,0.712875546952214,0.373220911830279,0.758168275301024,0.420883711772948,0.780722657776222,0,0.180062129805349,0.60281927134286,0.272145996605311,0.384341160854549,0.655912071918102,0.517406741478031,0.215567992932842,0.945530400839096,1.05570674498369,0.657587197282725,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0,0.469052119962192,0.900310307305074,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.648550476366846,0.730999937126662,0.439100230582101,0.671032093801859,3.36463917702604,1.02904612379284,0,0,0.639864751605702,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0.779856348476481,0,0,0,0.379335801906163,0,1.1270773567308,0,0.581857461502877,0.210407459670956,0.316182685621286,0.590440591918409,0,0.616985819609003,0.592905254174298,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.549122826376163,0,0,0,0,0.179397413521912,0,0.739012760666419,0.37898282354097,0.325929952884052,0.169745085775188,0,0.670025029767263,0.476087281772027,0.390267295715598,0.315270288212382,0.664394068946325,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,1.50791283939272,0,1.47529281905711,0.551873492609465,0.963303539926752,1.17211686592203,0.327869890753351,0.252470927204373,0.94652465824877,0.780877488593277,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0.790575555893047,0.642642632843614,0.283880170416537,0.534196811001766,0.81443479676788,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.590603785761546,0.307435147943927,0,0,0,0,0,1.03135543248187,0.680879211507576,0.18006109403131,0.388076051348264,1.07168517515796,0.532020700926821,0.713475270408282,0.822745103010605,0.608929898229199,0.704015124191131,1.0591603543191,0.220528398054962,0.98931751764888,0.968786560175433,1.20625849856312,0.954978752025092,0.492422699235184,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0.509935289981566,0.559805809294632,1.38199973804424,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0.655087691238533,0.539457385539283,0.661227645802687,0.26175594198403,0.259229946583586,1.24267862617385,9.58277995763124,0.299033092087958,0.330916980914195,0.388902376688095,0.904118764344118,1.18269287843545,0.234714477291508,0.781226309063701,1.36317147753424,0.724752362478018,3.45636007509439,0.316011120628178,0.608175645870493,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0.965947970160952,0.750729901804728,0.549454872801795,0.214368379079066,0.501572104035363,1.12950368523413,3.22227665555024,1.14579102687879,1.89038500578056,2.74033007908257,1.5107877947794,1.35004500046361,1.80128481289688,0.906284817968409,3.62432218226274,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,0.551530525350042,0.666740183404846,0.206035057238894,0,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.192075457214608,0.34461281373368,0.476293691283074,0.579421629724277,0.964546102318525,0.412085900803307,0.883193520806384,1.371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| |||
|short_description=p8@Lzts2 | |||
}} |
Revision as of 04:44, 4 August 2015
Short description: | p8@Lzts2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Lzts2_5end |
Coexpression cluster: | NA |
Association with transcript: | -71bp_to_NM_001130526, uc008hqm.2_5end |
EntrezGene: | 226154 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.19e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-13 | 23 |
neural cell | 3.35e-11 | 43 |
ectodermal cell | 8.50e-11 | 44 |
neurectodermal cell | 8.50e-11 | 44 |
neuron | 4.62e-08 | 33 |
neuronal stem cell | 4.62e-08 | 33 |
neuroblast | 4.62e-08 | 33 |
electrically signaling cell | 4.62e-08 | 33 |
electrically responsive cell | 6.65e-07 | 39 |
electrically active cell | 6.65e-07 | 39 |