FFCP PHASE1:Mm9::chr10:18551620..18551631,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=50 | |MCL_coexpression_id=50 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_uc007emw.2,uc011xao.1,uc011xap.1,uc011xaq.1,uc011xar.1,uc011xas.1,uc011xat.1,uc011xau.1,uc011xav.1,uc011xaw.1_5end | |association_with_transcript=-38bp_to_uc007emw.2,uc011xao.1,uc011xap.1,uc011xaq.1,uc011xar.1,uc011xas.1,uc011xat.1,uc011xau.1,uc011xav.1,uc011xaw.1_5end | ||
|cluster_id=chr10:18551620..18551631,- | |||
|description=CAGE_peak_1_at_uc007emw.2_5end,CAGE_peak_1_at_uc011xao.1_5end,CAGE_peak_1_at_uc011xap.1_5end,CAGE_peak_1_at_uc011xaq.1_5end,CAGE_peak_1_at_uc011xar.1_5end,CAGE_peak_1_at_uc011xas.1_5end,CAGE_peak_1_at_uc011xat.1_5end,CAGE_peak_1_at_uc011xau.1_5end,CAGE_peak_1_at_uc011xav.1_5end,CAGE_peak_1_at_uc011xaw.1_5end | |description=CAGE_peak_1_at_uc007emw.2_5end,CAGE_peak_1_at_uc011xao.1_5end,CAGE_peak_1_at_uc011xap.1_5end,CAGE_peak_1_at_uc011xaq.1_5end,CAGE_peak_1_at_uc011xar.1_5end,CAGE_peak_1_at_uc011xas.1_5end,CAGE_peak_1_at_uc011xat.1_5end,CAGE_peak_1_at_uc011xau.1_5end,CAGE_peak_1_at_uc011xav.1_5end,CAGE_peak_1_at_uc011xaw.1_5end | ||
|id=chr10:18551620..18551631,- | |id=chr10:18551620..18551631,- | ||
Latest revision as of 04:35, 4 August 2015
| Short description: | p1@uc007emw.2, p1@uc011xao.1, p1@uc011xap.1, p1@uc011xaq.1, p1@uc011xar.1, p1@uc011xas.1, p1@uc011xat.1, p1@uc011xau.1, p1@uc011xav.1, p1@uc011xaw.1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_uc007emw.2_5end, CAGE_peak_1_at_uc011xao.1_5end, CAGE_peak_1_at_uc011xap.1_5end, CAGE_peak_1_at_uc011xaq.1_5end, CAGE_peak_1_at_uc011xar.1_5end, CAGE_peak_1_at_uc011xas.1_5end, CAGE_peak_1_at_uc011xat.1_5end, CAGE_peak_1_at_uc011xau.1_5end, CAGE_peak_1_at_uc011xav.1_5end, CAGE_peak_1_at_uc011xaw.1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:50 |
| Association with transcript: | -38bp_to_uc007emw.2, uc011xao.1, uc011xap.1, uc011xaq.1, uc011xar.1, uc011xas.1, uc011xat.1, uc011xau.1, uc011xav.1, uc011xaw.1_5end |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lung | 2.89e-11 | 14 |
| respiratory tube | 2.89e-11 | 14 |
| respiration organ | 2.89e-11 | 14 |
| pair of lungs | 2.89e-11 | 14 |
| lung primordium | 2.89e-11 | 14 |
| lung bud | 2.89e-11 | 14 |
| epithelial bud | 2.41e-09 | 17 |
| thoracic cavity element | 2.41e-09 | 17 |
| thoracic segment organ | 2.41e-09 | 17 |
| thoracic cavity | 2.41e-09 | 17 |
| thoracic segment of trunk | 2.41e-09 | 17 |
| respiratory primordium | 2.41e-09 | 17 |
| endoderm of foregut | 2.41e-09 | 17 |
| epithelial fold | 5.42e-08 | 20 |
| breast | 2.36e-07 | 6 |
| chest | 2.36e-07 | 6 |
| testis | 5.81e-07 | 14 |
