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FFCP PHASE1:Mm9::chr5:151062731..151062836,+: Difference between revisions

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{{FFCP|EntrezGene=320365|HGNC=|MCL_coexpression_id=121|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0|association_with_transcript=226bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end|description=CAGE_peak_2_at_Fry_5end|id=chr5:151062731..151062836,+|ontology_enrichment_celltype=CL:0000117!3.87e-10!23;CL:0000337!3.87e-10!23;CL:0000540!3.20e-09!33;CL:0000047!3.20e-09!33;CL:0000031!3.20e-09!33;CL:0000404!3.20e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.86e-11,23;CL:0000337,4.86e-11,23;CL:0000540,1.35e-08,33;CL:0000047,1.35e-08,33;CL:0000031,1.35e-08,33;CL:0000404,1.35e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.99e-19!102;UBERON:0000924!2.99e-19!102;UBERON:0006601!2.99e-19!102;UBERON:0002346!5.96e-17!71;UBERON:0003075!5.96e-17!71;UBERON:0007284!5.96e-17!71;UBERON:0000033!4.87e-16!63;UBERON:0001017!2.14e-15!73;UBERON:0005743!2.14e-15!73;UBERON:0000073!3.71e-15!75;UBERON:0001016!3.71e-15!75;UBERON:0001049!1.67e-14!52;UBERON:0005068!1.67e-14!52;UBERON:0006241!1.67e-14!52;UBERON:0007135!1.67e-14!52;UBERON:0000955!7.43e-14!50;UBERON:0006238!7.43e-14!50;UBERON:0002616!2.57e-13!49;UBERON:0002020!9.66e-13!34;UBERON:0003056!6.48e-12!49;UBERON:0003080!1.65e-10!40;UBERON:0002791!2.66e-10!29;UBERON:0003528!2.66e-10!29;UBERON:0001893!2.66e-10!29;UBERON:0002780!6.74e-10!39;UBERON:0001890!6.74e-10!39;UBERON:0006240!6.74e-10!39;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10;UBERON:0000468!6.51e-07!333;UBERON:0000153!8.12e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.30e-18,95;UBERON:0000924,2.30e-18,95;UBERON:0006601,2.30e-18,95;UBERON:0000073,2.02e-17,54;UBERON:0002346,5.06e-17,64;UBERON:0003075,5.06e-17,64;UBERON:0007284,5.06e-17,64;UBERON:0010371,1.34e-16,73;UBERON:0010314,1.97e-16,92;UBERON:0001017,2.36e-16,73;UBERON:0001049,6.08e-16,52;UBERON:0005068,6.08e-16,52;UBERON:0006241,6.08e-16,52;UBERON:0007135,6.08e-16,52;UBERON:0001016,2.75e-15,75;UBERON:0002020,1.49e-14,34;UBERON:0000955,4.30e-13,47;UBERON:0006238,4.30e-13,47;UBERON:0002616,1.67e-12,46;UBERON:0003056,6.63e-12,49;UBERON:0003528,9.71e-12,29;UBERON:0002791,9.71e-12,29;UBERON:0001893,9.71e-12,29;UBERON:0003080,5.68e-11,40;UBERON:0002780,2.73e-10,39;UBERON:0001890,2.73e-10,39;UBERON:0006240,2.73e-10,39;UBERON:0002021,7.74e-08,10;UBERON:0000411,7.74e-08,10;UBERON:0001950,7.74e-08,10;UBERON:0002619,3.58e-07,17;UBERON:0000956,6.94e-07,21;UBERON:0001869,6.94e-07,21;UBERON:0000203,6.94e-07,21|phase1_expression=0.320297694209588,0,0,0,0,0.671517087647559,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,6.97354979238772,0,0,0.47997726838022,0.45881856213434,0,0,0.430942465371778,0.760093677825496,0.504060259519861,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,11.1274053472779,15.340738398889,13.9442908771359,0,0,0,0,0,0,0,1.34796496001021,1.08004750665353,0.420649922702764,9.14083150092171,9.05561017901615,2.44981598429908,1.62937300731002,3.67687514644008,56.1590993096882,41.6260722157712,44.0850750445419,19.2553980086083,20.3102568797349,10.939180781692,33.5019598801657,30.3891809417107,30.4068513075852,12.9636577608414,14.0947963991112,9.69277118291563,0.605809546665472,0.755715601067855,2.31891590961342,0,0,0,0,0,2.66844398250329,0,0,0,1.12674735821344,0,0,0,0,0,0,2.16949371466214,0,2.52351636410202,1.21439728736295,2.43572382649713,1.38369298353635,2.86373017049983,4.46837087115678,0.502666365318702,1.73036477414062,2.74738778147832,0,5.17653919831709,2.42925670306433,8.727754556434,0,77.0013496140369,85.8731497935166,1.02182822083437,0,0,0,59.167302564905,32.9400434029411,7.16229807043327,30.7669046740329,28.1287003063364,56.7261361647599,37.9644555578553,2.44414473240759,2.98576729464223,3.53811861807145,3.78795340595653,0.520481771850815,0.459804208866946,1.26043490863744,3.16480117455002,2.99360596265843,3.97152532883034,2.71735001223214,11.1242449417777,1.07783996466421,0.567318240503458,0.879755620819744,0.657587197282725,1.66828349535359,4.87553033131033,4.52720700097476,0.398068533636986,0,0,0,3.93538967817454,3.04883877975425,1.62055855314913,1.89395788468168,0.393528463494808,1.69693824176116,0.930135779001631,0.268273401399619,1.98501082024188,1.31647879930784,1.97000956894914,1.86458261955468,2.48539978623065,2.19550115291051,1.07365135008297,12.1968170167194,3.91037527041281,1.65209391491899,1.05780226665418,1.2797295032114,0.464473343720877,1.41754207454303,0.80673409849337,1.33426826306922,0.951128130562796,1.89811624617805,1.31759163779209,3.2673577144035,3.58121649674071,2.53453313254856,0,2.16138049874694,1.59313018603494,0.569003702859245,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,1.05203729835478,1.20149420536089,1.47610147979602,1.255989822731,2.09775178667061,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:320365
|HGNC=
|MCL_coexpression_id=121
|TSSclassifier=NA
|UniProt=uniprot:E9PVT7,uniprot:E9Q8I9,uniprot:Q4VA57,uniprot:Q8BIX6,uniprot:Q8BUA0
|association_with_transcript=226bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end
|cluster_id=chr5:151062731..151062836,+
|description=CAGE_peak_2_at_Fry_5end
|id=chr5:151062731..151062836,+
|ontology_enrichment_celltype=CL:0000117!3.87e-10!23;CL:0000337!3.87e-10!23;CL:0000540!3.20e-09!33;CL:0000047!3.20e-09!33;CL:0000031!3.20e-09!33;CL:0000404!3.20e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,4.86e-11,23;CL:0000337,4.86e-11,23;CL:0000540,1.35e-08,33;CL:0000047,1.35e-08,33;CL:0000031,1.35e-08,33;CL:0000404,1.35e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.99e-19!102;UBERON:0000924!2.99e-19!102;UBERON:0006601!2.99e-19!102;UBERON:0002346!5.96e-17!71;UBERON:0003075!5.96e-17!71;UBERON:0007284!5.96e-17!71;UBERON:0000033!4.87e-16!63;UBERON:0001017!2.14e-15!73;UBERON:0005743!2.14e-15!73;UBERON:0000073!3.71e-15!75;UBERON:0001016!3.71e-15!75;UBERON:0001049!1.67e-14!52;UBERON:0005068!1.67e-14!52;UBERON:0006241!1.67e-14!52;UBERON:0007135!1.67e-14!52;UBERON:0000955!7.43e-14!50;UBERON:0006238!7.43e-14!50;UBERON:0002616!2.57e-13!49;UBERON:0002020!9.66e-13!34;UBERON:0003056!6.48e-12!49;UBERON:0003080!1.65e-10!40;UBERON:0002791!2.66e-10!29;UBERON:0003528!2.66e-10!29;UBERON:0001893!2.66e-10!29;UBERON:0002780!6.74e-10!39;UBERON:0001890!6.74e-10!39;UBERON:0006240!6.74e-10!39;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10;UBERON:0000468!6.51e-07!333;UBERON:0000153!8.12e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.30e-18,95;UBERON:0000924,2.30e-18,95;UBERON:0006601,2.30e-18,95;UBERON:0000073,2.02e-17,54;UBERON:0002346,5.06e-17,64;UBERON:0003075,5.06e-17,64;UBERON:0007284,5.06e-17,64;UBERON:0010371,1.34e-16,73;UBERON:0010314,1.97e-16,92;UBERON:0001017,2.36e-16,73;UBERON:0001049,6.08e-16,52;UBERON:0005068,6.08e-16,52;UBERON:0006241,6.08e-16,52;UBERON:0007135,6.08e-16,52;UBERON:0001016,2.75e-15,75;UBERON:0002020,1.49e-14,34;UBERON:0000955,4.30e-13,47;UBERON:0006238,4.30e-13,47;UBERON:0002616,1.67e-12,46;UBERON:0003056,6.63e-12,49;UBERON:0003528,9.71e-12,29;UBERON:0002791,9.71e-12,29;UBERON:0001893,9.71e-12,29;UBERON:0003080,5.68e-11,40;UBERON:0002780,2.73e-10,39;UBERON:0001890,2.73e-10,39;UBERON:0006240,2.73e-10,39;UBERON:0002021,7.74e-08,10;UBERON:0000411,7.74e-08,10;UBERON:0001950,7.74e-08,10;UBERON:0002619,3.58e-07,17;UBERON:0000956,6.94e-07,21;UBERON:0001869,6.94e-07,21;UBERON:0000203,6.94e-07,21
|phase1_expression=0.320297694209588,0,0,0,0,0.671517087647559,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,6.97354979238772,0,0,0.47997726838022,0.45881856213434,0,0,0.430942465371778,0.760093677825496,0.504060259519861,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,11.1274053472779,15.340738398889,13.9442908771359,0,0,0,0,0,0,0,1.34796496001021,1.08004750665353,0.420649922702764,9.14083150092171,9.05561017901615,2.44981598429908,1.62937300731002,3.67687514644008,56.1590993096882,41.6260722157712,44.0850750445419,19.2553980086083,20.3102568797349,10.939180781692,33.5019598801657,30.3891809417107,30.4068513075852,12.9636577608414,14.0947963991112,9.69277118291563,0.605809546665472,0.755715601067855,2.31891590961342,0,0,0,0,0,2.66844398250329,0,0,0,1.12674735821344,0,0,0,0,0,0,2.16949371466214,0,2.52351636410202,1.21439728736295,2.43572382649713,1.38369298353635,2.86373017049983,4.46837087115678,0.502666365318702,1.73036477414062,2.74738778147832,0,5.17653919831709,2.42925670306433,8.727754556434,0,77.0013496140369,85.8731497935166,1.02182822083437,0,0,0,59.167302564905,32.9400434029411,7.16229807043327,30.7669046740329,28.1287003063364,56.7261361647599,37.9644555578553,2.44414473240759,2.98576729464223,3.53811861807145,3.78795340595653,0.520481771850815,0.459804208866946,1.26043490863744,3.16480117455002,2.99360596265843,3.97152532883034,2.71735001223214,11.1242449417777,1.07783996466421,0.567318240503458,0.879755620819744,0.657587197282725,1.66828349535359,4.87553033131033,4.52720700097476,0.398068533636986,0,0,0,3.93538967817454,3.04883877975425,1.62055855314913,1.89395788468168,0.393528463494808,1.69693824176116,0.930135779001631,0.268273401399619,1.98501082024188,1.31647879930784,1.97000956894914,1.86458261955468,2.48539978623065,2.19550115291051,1.07365135008297,12.1968170167194,3.91037527041281,1.65209391491899,1.05780226665418,1.2797295032114,0.464473343720877,1.41754207454303,0.80673409849337,1.33426826306922,0.951128130562796,1.89811624617805,1.31759163779209,3.2673577144035,3.58121649674071,2.53453313254856,0,2.16138049874694,1.59313018603494,0.569003702859245,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,1.05203729835478,1.20149420536089,1.47610147979602,1.255989822731,2.09775178667061,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0.339490171550376,0,0.335012514883631,0.476087281772027,0,0,0,0,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0,51.0550876161178,49.5805434285019,0,0.757412781613119,1.57754109708128,1.17131623288992,1.93881057959519,0.477937595905104,0.891194696329576,0.566153061577665,2.02405350837447,1.75353514746787,4.34816555741176,17.9939937196212,0.567760340833074,0,0.162886959353576,0.164970122972535,23.8941249011933,0.242780636154981,0.302323556964751,0,0,0,0.775284879504663,0,0.712994756769443,1.58018378967908,8.4334886859999,8.25084345985495,9.53230896110606,0,0.258717367565509,0.428674070063185,0.354680467284547,0.535106452806212,2.13913726782757,1.522324745573,0,0.21183207086382,3.74898276693435,2.96795255294664,4.03661066739764,2.23157822234177,3.22305328808468,1.64140899745061,2.33184669303881,43.2040953684488,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0,1.01659733563424,0.432021363287205,0.418176592028937,0.87345025498471,2.15782954215713,4.21532624199213,1.83229159388821,3.24037433229482,45.9791091684325,0,0,0,0,0.387479470433193,0.506868376472335,1.17357238645754,0.13020438484395,0.419437377702843,0,0,0.632022241256357,0.405450430580328,0,0.25984164595559,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.350630706544707,6.57518112484113,0,0,0,1.35232715822533,0.187682475451182,0.549454872801795,0.428736758158132,0,13.5540442228096,15.1907328047368,17.7597609166213,11.8578695817144,18.4972280338073,27.1941803060292,18.2256075062588,22.0657389579868,27.6416869480365,29.5123377698537,0.31136204275253,1.59609949360412,1.02440163452481,5.10524105843418,2.09613162627982,4.04455718590031,3.33370091702423,2.88449080134452,3.20919209591815,3.03236654116557,3.54871019846336,3.58390048633545,3.55837728385553,2.11283002936069,3.27382173046996,1.90517476513229,2.0859178670074,2.31491064556446,2.88460130562315,2.50238164228475,3.77156177623957,1.77475806159337,2.14592570952589,2.90692833264657,2.54095327121393,3.04612588410035,3.10977553883713,2.36762740294059,2.58027816307137,0.561142271657738,1.89816028998679,2.65962102414021,2.04615521584845,1.70430525304563,4.05103883060397,6.24526444844865,3.27504251823572,4.72716318906256,9.18183993930448,5.51478547798789,5.10109238364927
|short_description=p2@Fry
}}

Revision as of 03:18, 4 August 2015

Short description:p2@Fry
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fry_5end
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: 226bp_to_ENSMUST00000052630, ENSMUST00000087204, NM_172887, uc009atv.2_5end
EntrezGene:320365
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fry

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D356.16
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F341.63
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D744.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I630.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B277.00
cerebellum, neonate N30.CNhs11135.1395-42I285.87
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A459.17
corpus striatum, adult.CNhs10487.19-21D832.94
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D530.77
cortex, neonate N30.CNhs11107.1392-42F228.13
diencephalon, adult.CNhs10482.20-12F256.73
diencephalon, neonate N30.CNhs11201.1388-42B237.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E812.20
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C251.06
medulla oblongata, neonate N30.CNhs11200.1396-42A349.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H32.23
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C943.20
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C145.98
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A827.64
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A929.51
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C69.18
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.86e-1123
neuroblast (sensu Vertebrata)4.86e-1123
neuron1.35e-0833
neuronal stem cell1.35e-0833
neuroblast1.35e-0833
electrically signaling cell1.35e-0833

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.30e-1895
ectoderm2.30e-1895
presumptive ectoderm2.30e-1895
regional part of nervous system2.02e-1754
neurectoderm5.06e-1764
neural plate5.06e-1764
presumptive neural plate5.06e-1764
ecto-epithelium1.34e-1673
structure with developmental contribution from neural crest1.97e-1692
central nervous system2.36e-1673
neural tube6.08e-1652
neural rod6.08e-1652
future spinal cord6.08e-1652
neural keel6.08e-1652
nervous system2.75e-1575
gray matter1.49e-1434
brain4.30e-1347
future brain4.30e-1347
regional part of brain1.67e-1246
pre-chordal neural plate6.63e-1249
brain grey matter9.71e-1229
regional part of telencephalon9.71e-1229
telencephalon9.71e-1229
anterior neural tube5.68e-1140
regional part of forebrain2.73e-1039
forebrain2.73e-1039
future forebrain2.73e-1039
occipital lobe7.74e-0810
visual cortex7.74e-0810
neocortex7.74e-0810
regional part of cerebral cortex3.58e-0717
cerebral cortex6.94e-0721
cerebral hemisphere6.94e-0721
pallium6.94e-0721
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