FFCP PHASE1:Mm9::chr10:127848679..127848732,+: Difference between revisions
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{{FFCP|EntrezGene=67588|HGNC=|MCL_coexpression_id=1|UniProt=Q8BH75|association_with_transcript=7bp_to_ENSMUST00000096386,ENSMUST00000171342,NM_001164237,NM_026259,uc007hmr.2,uc007hms.2,uc007hmt.2,uc007hmu.2_5end|description=CAGE_peak_1_at_Rnf41_5end|id=chr10:127848679..127848732,+|ontology_enrichment_celltype=CL:0000055!7.36e-18!50;CL:0002319!1.90e-16!43;CL:0000221!3.12e-16!44;CL:0000133!3.12e-16!44;CL:0000393!5.20e-14!39;CL:0000211!5.20e-14!39;CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0002321!5.13e-13!70;CL:0000220!5.13e-13!70;CL:0000540!3.78e-12!33;CL:0000047!3.78e-12!33;CL:0000031!3.78e-12!33;CL:0000404!3.78e-12!33|ontology_enrichment_celltype_v019_2=CL:0002319,1.90e-16,43;CL:0000221,3.12e-16,44;CL:0000133,3.12e-16,44;CL:0000393,5.20e-14,39;CL:0000211,5.20e-14,39;CL:0000117,2.22e-13,23;CL:0000337,2.22e-13,23;CL:0002321,5.13e-13,70;CL:0000540,3.78e-12,33;CL:0000047,3.78e-12,33;CL:0000031,3.78e-12,33;CL:0000404,3.78e-12,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.19e-30!75;UBERON:0001016!1.19e-30!75;UBERON:0001017!1.61e-29!73;UBERON:0005743!1.61e-29!73;UBERON:0004121!1.47e-26!102;UBERON:0000924!1.47e-26!102;UBERON:0006601!1.47e-26!102;UBERON:0001049!1.20e-23!52;UBERON:0005068!1.20e-23!52;UBERON:0006241!1.20e-23!52;UBERON:0007135!1.20e-23!52;UBERON:0000955!3.88e-23!50;UBERON:0006238!3.88e-23!50;UBERON:0002616!1.02e-22!49;UBERON:0002346!3.09e-20!71;UBERON:0003075!3.09e-20!71;UBERON:0007284!3.09e-20!71;UBERON:0000033!1.25e-19!63;UBERON:0002020!2.82e-19!34;UBERON:0003080!1.52e-17!40;UBERON:0002791!2.56e-17!29;UBERON:0003528!2.56e-17!29;UBERON:0001893!2.56e-17!29;UBERON:0002780!6.51e-17!39;UBERON:0001890!6.51e-17!39;UBERON:0006240!6.51e-17!39;UBERON:0003056!1.34e-15!49;UBERON:0000956!2.03e-12!21;UBERON:0001869!2.03e-12!21;UBERON:0000203!2.03e-12!21;UBERON:0002619!2.68e-10!17;UBERON:0007811!3.07e-10!86;UBERON:0000153!3.27e-08!94;UBERON:0002021!3.15e-07!10;UBERON:0000411!3.15e-07!10;UBERON:0001950!3.15e-07!10;UBERON:0004111!5.76e-07!122;UBERON:0000025!8.87e-07!114;UBERON:0003076!9.89e-07!12;UBERON:0003057!9.89e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-30,75;UBERON:0001017,1.61e-29,73;UBERON:0004121,4.34e-27,95;UBERON:0000924,4.34e-27,95;UBERON:0006601,4.34e-27,95;UBERON:0000073,6.15e-25,54;UBERON:0001049,1.20e-23,52;UBERON:0005068,1.20e-23,52;UBERON:0006241,1.20e-23,52;UBERON:0007135,1.20e-23,52;UBERON:0000955,3.09e-21,47;UBERON:0006238,3.09e-21,47;UBERON:0002346,3.86e-21,64;UBERON:0003075,3.86e-21,64;UBERON:0007284,3.86e-21,64;UBERON:0002616,8.02e-21,46;UBERON:0010371,1.78e-19,73;UBERON:0002020,2.82e-19,34;UBERON:0003080,1.52e-17,40;UBERON:0003528,2.56e-17,29;UBERON:0002791,2.56e-17,29;UBERON:0001893,2.56e-17,29;UBERON:0002780,6.51e-17,39;UBERON:0001890,6.51e-17,39;UBERON:0006240,6.51e-17,39;UBERON:0003056,1.34e-15,49;UBERON:0010314,1.65e-14,92;UBERON:0000956,2.03e-12,21;UBERON:0001869,2.03e-12,21;UBERON:0000203,2.03e-12,21;UBERON:0002619,2.68e-10,17;UBERON:0002021,3.15e-07,10;UBERON:0000411,3.15e-07,10;UBERON:0001950,3.15e-07,10;UBERON:0004111,5.76e-07,122;UBERON:0000025,8.87e-07,114;UBERON:0003076,9.89e-07,12;UBERON:0003057,9.89e-07,12|phase1_expression=13.9329496981171,17.4487703819681,27.2999543633722,38.4129548359674,39.0698669358151,13.5982210248631,11.2134067485852,16.0112921067555,3.09735188733667,2.34064526321993,12.3276937122364,7.6581272635523,15.4080656938085,12.2388563386596,13.6575002344422,9.92128810210147,11.1929900500503,23.6596624018678,26.4630856859076,21.2194825899015,23.8121212422995,5.26242041364692,5.22399578277871,16.9591968161011,13.535147582963,16.6527269593356,15.9381938578858,17.6686410802429,10.8313349090133,13.6096270070363,10.199603490144,11.4305521222734,15.3766196896143,0,12.7094712690561,9.97407872150954,11.2293145944303,2.92972141515835,3.1253413780952,5.75876118371178,1.76469446409304,4.09827290975067,4.36959317728038,30.8447204040164,31.0213409531715,26.4307323112821,30.5132624295735,31.6136476751647,30.5363794000916,33.636372539851,24.9175830493145,44.5632949531412,14.4293041209653,8.70434570413613,10.7550015725588,21.3525331909836,22.0630748752843,19.5955395065428,42.6887732413751,48.138179113755,53.2418378945191,26.0910289693232,18.6751907183339,10.3488467487361,16.8107281636386,14.209602298922,26.664409836138,33.4269925629752,34.943399347957,41.9868468211558,45.6405166132499,29.136400409188,36.4433092570162,38.4621109534956,36.6129699289663,34.0110951045708,51.7544640697127,37.7954520732156,46.2355665101293,49.7211304742831,53.0628332893976,51.0495103145625,56.9533317962817,49.5231096827878,40.3387374130779,29.7574871328404,28.3319644790215,31.5015063444758,40.6649658199198,30.1530524826074,20.2905142091174,12.0459342777394,4.75979933595425,5.93673510801599,5.84798775702902,8.51251085484938,13.3422199125164,27.4392819350673,27.2775304833012,29.3271846843582,14.5068722369981,32.0816193535795,22.9324715735981,42.6640021891999,5.62876706629157,8.10751569520315,9.60496445528088,8.90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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67588 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BH75 | |||
|association_with_transcript=7bp_to_ENSMUST00000096386,ENSMUST00000171342,NM_001164237,NM_026259,uc007hmr.2,uc007hms.2,uc007hmt.2,uc007hmu.2_5end | |||
|cluster_id=chr10:127848679..127848732,+ | |||
|description=CAGE_peak_1_at_Rnf41_5end | |||
|id=chr10:127848679..127848732,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.36e-18!50;CL:0002319!1.90e-16!43;CL:0000221!3.12e-16!44;CL:0000133!3.12e-16!44;CL:0000393!5.20e-14!39;CL:0000211!5.20e-14!39;CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0002321!5.13e-13!70;CL:0000220!5.13e-13!70;CL:0000540!3.78e-12!33;CL:0000047!3.78e-12!33;CL:0000031!3.78e-12!33;CL:0000404!3.78e-12!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.90e-16,43;CL:0000221,3.12e-16,44;CL:0000133,3.12e-16,44;CL:0000393,5.20e-14,39;CL:0000211,5.20e-14,39;CL:0000117,2.22e-13,23;CL:0000337,2.22e-13,23;CL:0002321,5.13e-13,70;CL:0000540,3.78e-12,33;CL:0000047,3.78e-12,33;CL:0000031,3.78e-12,33;CL:0000404,3.78e-12,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.19e-30!75;UBERON:0001016!1.19e-30!75;UBERON:0001017!1.61e-29!73;UBERON:0005743!1.61e-29!73;UBERON:0004121!1.47e-26!102;UBERON:0000924!1.47e-26!102;UBERON:0006601!1.47e-26!102;UBERON:0001049!1.20e-23!52;UBERON:0005068!1.20e-23!52;UBERON:0006241!1.20e-23!52;UBERON:0007135!1.20e-23!52;UBERON:0000955!3.88e-23!50;UBERON:0006238!3.88e-23!50;UBERON:0002616!1.02e-22!49;UBERON:0002346!3.09e-20!71;UBERON:0003075!3.09e-20!71;UBERON:0007284!3.09e-20!71;UBERON:0000033!1.25e-19!63;UBERON:0002020!2.82e-19!34;UBERON:0003080!1.52e-17!40;UBERON:0002791!2.56e-17!29;UBERON:0003528!2.56e-17!29;UBERON:0001893!2.56e-17!29;UBERON:0002780!6.51e-17!39;UBERON:0001890!6.51e-17!39;UBERON:0006240!6.51e-17!39;UBERON:0003056!1.34e-15!49;UBERON:0000956!2.03e-12!21;UBERON:0001869!2.03e-12!21;UBERON:0000203!2.03e-12!21;UBERON:0002619!2.68e-10!17;UBERON:0007811!3.07e-10!86;UBERON:0000153!3.27e-08!94;UBERON:0002021!3.15e-07!10;UBERON:0000411!3.15e-07!10;UBERON:0001950!3.15e-07!10;UBERON:0004111!5.76e-07!122;UBERON:0000025!8.87e-07!114;UBERON:0003076!9.89e-07!12;UBERON:0003057!9.89e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-30,75;UBERON:0001017,1.61e-29,73;UBERON:0004121,4.34e-27,95;UBERON:0000924,4.34e-27,95;UBERON:0006601,4.34e-27,95;UBERON:0000073,6.15e-25,54;UBERON:0001049,1.20e-23,52;UBERON:0005068,1.20e-23,52;UBERON:0006241,1.20e-23,52;UBERON:0007135,1.20e-23,52;UBERON:0000955,3.09e-21,47;UBERON:0006238,3.09e-21,47;UBERON:0002346,3.86e-21,64;UBERON:0003075,3.86e-21,64;UBERON:0007284,3.86e-21,64;UBERON:0002616,8.02e-21,46;UBERON:0010371,1.78e-19,73;UBERON:0002020,2.82e-19,34;UBERON:0003080,1.52e-17,40;UBERON:0003528,2.56e-17,29;UBERON:0002791,2.56e-17,29;UBERON:0001893,2.56e-17,29;UBERON:0002780,6.51e-17,39;UBERON:0001890,6.51e-17,39;UBERON:0006240,6.51e-17,39;UBERON:0003056,1.34e-15,49;UBERON:0010314,1.65e-14,92;UBERON:0000956,2.03e-12,21;UBERON:0001869,2.03e-12,21;UBERON:0000203,2.03e-12,21;UBERON:0002619,2.68e-10,17;UBERON:0002021,3.15e-07,10;UBERON:0000411,3.15e-07,10;UBERON:0001950,3.15e-07,10;UBERON:0004111,5.76e-07,122;UBERON:0000025,8.87e-07,114;UBERON:0003076,9.89e-07,12;UBERON:0003057,9.89e-07,12 | |||
|phase1_expression=13.9329496981171,17.4487703819681,27.2999543633722,38.4129548359674,39.0698669358151,13.5982210248631,11.2134067485852,16.0112921067555,3.09735188733667,2.34064526321993,12.3276937122364,7.6581272635523,15.4080656938085,12.2388563386596,13.6575002344422,9.92128810210147,11.1929900500503,23.6596624018678,26.4630856859076,21.2194825899015,23.8121212422995,5.26242041364692,5.22399578277871,16.9591968161011,13.535147582963,16.6527269593356,15.9381938578858,17.6686410802429,10.8313349090133,13.6096270070363,10.199603490144,11.4305521222734,15.3766196896143,0,12.7094712690561,9.97407872150954,11.2293145944303,2.92972141515835,3.1253413780952,5.75876118371178,1.76469446409304,4.09827290975067,4.36959317728038,30.8447204040164,31.0213409531715,26.4307323112821,30.5132624295735,31.6136476751647,30.5363794000916,33.636372539851,24.9175830493145,44.5632949531412,14.4293041209653,8.70434570413613,10.7550015725588,21.3525331909836,22.0630748752843,19.5955395065428,42.6887732413751,48.138179113755,53.2418378945191,26.0910289693232,18.6751907183339,10.3488467487361,16.8107281636386,14.209602298922,26.664409836138,33.4269925629752,34.943399347957,41.9868468211558,45.6405166132499,29.136400409188,36.4433092570162,38.4621109534956,36.6129699289663,34.0110951045708,51.7544640697127,37.7954520732156,46.2355665101293,49.7211304742831,53.0628332893976,51.0495103145625,56.9533317962817,49.5231096827878,40.3387374130779,29.7574871328404,28.3319644790215,31.5015063444758,40.6649658199198,30.1530524826074,20.2905142091174,12.0459342777394,4.75979933595425,5.93673510801599,5.84798775702902,8.51251085484938,13.3422199125164,27.4392819350673,27.2775304833012,29.3271846843582,14.5068722369981,32.0816193535795,22.9324715735981,42.6640021891999,5.62876706629157,8.10751569520315,9.60496445528088,8.90634261808668,15.2773351351831,23.1569736941127,12.3174582003956,15.2232739156071,12.4532368518272,13.2635923686308,13.7578787348775,20.8606541607261,22.0003521283593,13.8815382643115,7.96149496754887,9.05894359705491,9.71702681225732,10.1823803158397,7.45567044872489,61.4839673724249,40.0043210013699,15.5828803677241,2.03685711660064,2.39961092397363,1.39777249780371,46.435098215495,42.0900554593136,35.183218591602,41.8916611663386,47.0516441487808,47.1678861150201,37.6399730317198,9.57290020192973,12.5651040316194,21.9868799837297,20.6233018768745,8.45782879257574,12.4147136394075,13.1445354757905,13.7141384230501,14.2196283226275,14.9893052733274,19.7710638821028,24.0594134787285,7.76044774558232,9.26619792822314,10.5570674498369,8.98702502953057,10.0097009721215,12.8853301613202,14.610531684964,11.7430217422911,0.702213187313235,1.54408744268829,1.42081749697796,6.62802472113606,10.3191466391682,7.56260658136262,7.81257627431194,6.68998387941173,12.4956361438776,12.556833016522,15.0233104783787,9.22446204700639,13.6584675428189,9.52171291658752,14.6734545277999,15.3509986796599,13.8316572633362,14.3600868073598,40.1653801757483,39.0008480917488,19.4947081960441,13.4869788998408,10.2378360256912,11.147360249301,9.02072229254653,15.9329984452441,14.6769508937614,19.403013863481,15.1849299694244,15.646400698781,18.3474702424197,17.7071260116624,20.8611573217459,12.5834717211591,12.9682829924817,13.9398891278057,9.67306294860717,11.6533482861923,15.7790829942313,8.75700709734851,9.30971938404604,10.1696938840962,11.2561036081178,13.4325234661438,15.2288766006134,10.488758933353,8.00422093135302,7.50802975722423,7.86235980452812,7.87017393346988,7.91154473415161,9.16473207059184,6.62027214631691,8.91858026097513,5.5125977103512,4.94210543738547,8.62609239164127,8.18710084870708,10.2972432127805,10.3557339958316,7.53469136792031,13.0259750768109,20.8771104888263,10.8010104709176,9.61493361007953,9.33597971763535,7.51008794523207,15.5780819420889,19.5195785526531,16.9766273636285,15.4482441224067,16.1669223443606,19.7723913135284,21.3022309130459,16.9231282228578,18.8043776155965,9.04747703635634,4.89515115436839,6.88469982226651,12.9690270763224,41.9037039868137,39.8519734413491,18.196778936811,15.6531974866711,13.566853434899,15.6175497718655,14.8642144435631,15.0550342710108,20.0518806674155,14.4369030702305,18.6212922770451,18.9966307642353,17.392662229647,29.8828824272281,19.8716119291576,13.3549202750441,12.8680697889325,19.3015043877867,11.9470624505967,8.98288353773431,8.46505959501303,10.3732793865744,10.335566250827,12.604841065701,14.7304127105886,11.2695456138027,11.0514187299264,9.16506598013866,9.48767477174989,15.470331487228,32.3417625466099,9.00305470156551,11.7716402242307,12.2172109968008,15.7832807941623,19.9773075714319,22.0495687606842,24.3571959291679,12.4376005273766,18.6412222360162,17.8628002424519,17.4779428117969,12.1098320021929,14.2941632079729,18.2639686324799,21.9948805658382,14.2825609948627,43.7603712744803,10.9357363710626,10.1129565301979,8.88933731374616,6.96963290917357,10.935538217682,8.69357058184786,1.86976272993241,2.23922323717853,2.3493995546752,16.2294005062569,9.49007980743406,8.94605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| |||
|short_description=p1@Rnf41 | |||
}} |
Revision as of 02:46, 4 August 2015
Short description: | p1@Rnf41 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnf41_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 7bp_to_ENSMUST00000096386, ENSMUST00000171342, NM_001164237, NM_026259, uc007hmr.2, uc007hms.2, uc007hmt.2, uc007hmu.2_5end |
EntrezGene: | 67588 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.90e-16 | 43 |
ectodermal cell | 3.12e-16 | 44 |
neurectodermal cell | 3.12e-16 | 44 |
electrically responsive cell | 5.20e-14 | 39 |
electrically active cell | 5.20e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.22e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.22e-13 | 23 |
embryonic cell | 5.13e-13 | 70 |
neuron | 3.78e-12 | 33 |
neuronal stem cell | 3.78e-12 | 33 |
neuroblast | 3.78e-12 | 33 |
electrically signaling cell | 3.78e-12 | 33 |