FFCP PHASE1:Mm9::chr10:127520947..127520994,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:127520947..127520994,+ | |||
|description=CAGE_peak_at_chr10:127520947..127520994,+ | |description=CAGE_peak_at_chr10:127520947..127520994,+ | ||
|id=chr10:127520947..127520994,+ | |id=chr10:127520947..127520994,+ | ||
|ontology_enrichment_celltype=CL:0000548!8.64e-12!115;CL:0000004!8.64e-12!115;CL:0000255!8.64e-12!115;CL:0002371!1.93e-10!118;CL:0002321!2.95e-10!70;CL:0000220!2.95e-10!70;CL:0000144!1.73e-09!121;CL:0000012!1.73e-09!121;CL:0000117!2.07e-09!23;CL:0000337!2.07e-09!23;CL:0002319!3.98e-08!43;CL:0000055!6.42e-08!50;CL:0000221!1.69e-07!44;CL:0000133!1.69e-07!44;CL:0000540!7.22e-07!33;CL:0000047!7.22e-07!33;CL:0000031!7.22e-07!33;CL:0000404!7.22e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.96e-11,70;CL:0000117,8.22e-10,23;CL:0000337,8.22e-10,23;CL:0002319,2.97e-08,43;CL:0000221,1.07e-07,44;CL:0000133,1.07e-07,44;CL:0000723,3.25e-07,91;CL:0000048,3.25e-07,91;CL:0000540,6.54e-07,33;CL:0000047,6.54e-07,33;CL:0000031,6.54e-07,33;CL:0000404,6.54e-07,33;CL:0000034,6.68e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.32e-09!34;UBERON:0002791!3.64e-07!29;UBERON:0003528!3.64e-07!29;UBERON:0001893!3.64e-07!29;UBERON:0001017!4.71e-07!73;UBERON:0005743!4.71e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.69e-09,34;UBERON:0003528,3.56e-07,29;UBERON:0002791,3.56e-07,29;UBERON:0001893,3.56e-07,29;UBERON:0001017,4.92e-07,73;UBERON:0002021,6.25e-07,10;UBERON:0000411,6.25e-07,10;UBERON:0001950,6.25e-07,10 | |||
|phase1_expression=0.480446541314382,4.88565570695105,4.54999239389536,8.46899791659124,8.01433167914156,2.18243053485457,4.43864017131499,0.774739940649458,1.54867594366833,1.87251621057595,1.19852577757853,1.59544317990673,0.171200729931206,0.611942816932982,4.33042690360362,2.22722794128809,4.19737126876888,0.788655413395594,0.685572168028694,0,2.29616883407888,1.39007331681239,2.08959831311148,5.11975752938901,3.89995777814189,3.44539178469012,3.87685796543167,5.17130958446134,7.60093677825496,3.02436155711917,3.32595765982957,5.08024538767705,4.30545351309199,0,2.3108129580102,2.32728503501889,2.04169356262369,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,1.00717454380462,0.811015449756117,0.734187008646726,0.782391344348039,7.19483016055474,3.95435128922049,5.24960727500565,5.45947044338914,5.75010257459886,0.671130424230945,2.90144856804538,1.34437519656986,2.31533492432352,2.0057340795713,4.12537673821954,3.43937983461316,7.40587370980846,3.1691570175309,3.72728985276045,0,4.49949858640699,3.9554654502679,4.2628806896766,2.69640099466564,3.07374644257244,3.11068836925433,6.48028503992115,2.3135745748652,6.56997264128748,9.27647871996777,1.10241719293459,3.35459148563827,4.5960939330501,6.60695285996332,8.04430229936683,7.83393319606842,1.58263545276233,5.58074625974699,3.12548022334056,10.3297709630511,6.19038871034848,5.95913166329559,3.53554302568401,7.26095572075425,2.79599168737951,1.66597625333005,0.302286240427142,0.289864488701678,6.0229671388697,6.11974200336975,10.2543606411185,10.3964226791627,6.72040330646003,3.7919993435573,3.06774580640504,6.23486411046885,2.82671659608272,0.422530259330042,3.84979432242953,0,0,2.16491041011214,2.53359865475099,6.0662933401774,2.51204535381932,0.517875767294343,1.33597925158342,0.693941307064543,0.608930956624282,0.922461989024234,0.753613202763113,0.352766121407114,2.38766523526383,0.247194967734374,3.03658649531814,0.884610551949874,1.13236794963186,1.10420759230197,0.484875253135222,3.72783522436244,1.17112318804619,1.8850203613211,4.08731288333746,3.95389910869537,0.599902730993408,2.03312363316904,0.599162557619291,0.457500602818626,0.753926112677186,0.695297280769106,1.53429274398198,2.0778804455956,0.648965052271031,0.611036183101898,1.11966273549084,0.505445516867349,1.05220927943237,1.04096354370163,0.919608417733892,1.26043490863744,0.60281927134286,0.136072998302656,0.640568601424249,0.843315521037559,1.03481348295606,0.646703978798527,0.567318240503458,1.23165786914764,1.53437012699302,0,0.348252166522167,1.02891068203972,0.398068533636986,2.1066395619397,2.57347907114715,1.42081749697796,1.86413195281952,2.57978665979206,3.6012412292203,3.31442629819294,1.18058539048442,4.31947916084659,4.18561100550734,4.29237442239391,3.73649095574942,3.78487654801005,4.43252153013557,4.53985333456792,10.2339991197733,7.02560368931362,4.96563749413376,0.841159794256509,1.23485534855141,2.31293148088659,2.90895623329899,0.426576501070468,0.232236671860439,1.15980715189884,1.61346819698674,1.55664630691409,1.90225626112559,2.84717436926707,0.658795818896044,1.25667604400135,2.78539060857611,1.36474860983384,1.79763881730844,3.02593269824572,1.39398891278057,1.70701110857774,1.02823661348756,0,2.24016460629846,0.969762435838129,1.40271639780637,1.96033265085198,2.95220295959204,2.98297582898612,4.31890073726302,2.37162101669719,1.00107063429656,0.982794975566015,0.224862112384854,0.811440485554012,0.964708639009667,1.2731292589071,2.30156909960649,1.78348749452539,1.37280706594041,18.6898668485561,3.34926852901653,0,1.51547326768267,1.25578189465339,2.8946611281802,0.739012760666419,0.947457058852424,0.977789858652155,1.52770577197669,0,0.670025029767263,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.478364305972461,0.983179888294428,0.863424909329478,0.578596234326046,6.03165135757089,1.63171705145613,1.47529281905711,0.551873492609465,2.56880943980467,2.57865710502847,0.983609672260053,4.79694761688309,1.26203287766503,0.780877488593277,0.861693590931196,2.86762557543062,1.33679204449436,1.41538265394416,1.61924280669958,1.75353514746787,2.37172666767914,0.642642632843614,0.567760340833074,0.35613120733451,0.651547837414304,0.329940245945071,0,0.971122544619926,2.72091201268276,0.943025398779491,1.18120757152309,0.922305443831782,0.516856586336442,0.727067458955011,1.42598951353889,0.632073515871632,1.05418608574999,1.03135543248187,0,0.720244376125241,1.29358683782755,0.857348140126369,0.532020700926821,1.60531935841864,0.658196082408484,0,0.938686832254841,0.847328283455281,0,0.8244312647074,1.29171541356724,0.120625849856312,0.835606408021955,0.656563598980245,2.62332752966866,2.59595422814714,0.683483523191411,1.03193433981611,1.48155621895769,0.753473828018764,0.820165366326151,0.915112692826091,0.679913719975421,0,1.24379976423981,0.954670618015114,1.73984796469624,1.42323626988794,1.18805874903981,0.418176592028937,0.436725127492355,0.944050424693745,0.991841468704031,2.87931536182433,1.68499465279331,0.6213393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| |phase1_expression=0.480446541314382,4.88565570695105,4.54999239389536,8.46899791659124,8.01433167914156,2.18243053485457,4.43864017131499,0.774739940649458,1.54867594366833,1.87251621057595,1.19852577757853,1.59544317990673,0.171200729931206,0.611942816932982,4.33042690360362,2.22722794128809,4.19737126876888,0.788655413395594,0.685572168028694,0,2.29616883407888,1.39007331681239,2.08959831311148,5.11975752938901,3.89995777814189,3.44539178469012,3.87685796543167,5.17130958446134,7.60093677825496,3.02436155711917,3.32595765982957,5.08024538767705,4.30545351309199,0,2.3108129580102,2.32728503501889,2.04169356262369,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,1.00717454380462,0.811015449756117,0.734187008646726,0.782391344348039,7.19483016055474,3.95435128922049,5.24960727500565,5.45947044338914,5.75010257459886,0.671130424230945,2.90144856804538,1.34437519656986,2.31533492432352,2.0057340795713,4.12537673821954,3.43937983461316,7.40587370980846,3.1691570175309,3.72728985276045,0,4.49949858640699,3.9554654502679,4.2628806896766,2.69640099466564,3.07374644257244,3.11068836925433,6.48028503992115,2.3135745748652,6.56997264128748,9.27647871996777,1.10241719293459,3.35459148563827,4.5960939330501,6.60695285996332,8.04430229936683,7.83393319606842,1.58263545276233,5.58074625974699,3.12548022334056,10.3297709630511,6.19038871034848,5.95913166329559,3.53554302568401,7.26095572075425,2.79599168737951,1.66597625333005,0.302286240427142,0.289864488701678,6.0229671388697,6.11974200336975,10.2543606411185,10.3964226791627,6.72040330646003,3.7919993435573,3.06774580640504,6.23486411046885,2.82671659608272,0.422530259330042,3.84979432242953,0,0,2.16491041011214,2.53359865475099,6.0662933401774,2.51204535381932,0.517875767294343,1.33597925158342,0.693941307064543,0.608930956624282,0.922461989024234,0.753613202763113,0.352766121407114,2.38766523526383,0.247194967734374,3.03658649531814,0.884610551949874,1.13236794963186,1.10420759230197,0.484875253135222,3.72783522436244,1.17112318804619,1.8850203613211,4.08731288333746,3.95389910869537,0.599902730993408,2.03312363316904,0.599162557619291,0.457500602818626,0.753926112677186,0.695297280769106,1.53429274398198,2.0778804455956,0.648965052271031,0.611036183101898,1.11966273549084,0.505445516867349,1.05220927943237,1.04096354370163,0.919608417733892,1.26043490863744,0.60281927134286,0.136072998302656,0.640568601424249,0.843315521037559,1.03481348295606,0.646703978798527,0.567318240503458,1.23165786914764,1.53437012699302,0,0.348252166522167,1.02891068203972,0.398068533636986,2.1066395619397,2.57347907114715,1.42081749697796,1.86413195281952,2.57978665979206,3.6012412292203,3.31442629819294,1.18058539048442,4.31947916084659,4.18561100550734,4.29237442239391,3.73649095574942,3.78487654801005,4.43252153013557,4.53985333456792,10.2339991197733,7.02560368931362,4.96563749413376,0.841159794256509,1.23485534855141,2.31293148088659,2.90895623329899,0.426576501070468,0.232236671860439,1.15980715189884,1.61346819698674,1.55664630691409,1.90225626112559,2.84717436926707,0.658795818896044,1.25667604400135,2.78539060857611,1.36474860983384,1.79763881730844,3.02593269824572,1.39398891278057,1.70701110857774,1.02823661348756,0,2.24016460629846,0.969762435838129,1.40271639780637,1.96033265085198,2.95220295959204,2.98297582898612,4.31890073726302,2.37162101669719,1.00107063429656,0.982794975566015,0.224862112384854,0.811440485554012,0.964708639009667,1.2731292589071,2.30156909960649,1.78348749452539,1.37280706594041,18.6898668485561,3.34926852901653,0,1.51547326768267,1.25578189465339,2.8946611281802,0.739012760666419,0.947457058852424,0.977789858652155,1.52770577197669,0,0.670025029767263,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.478364305972461,0.983179888294428,0.863424909329478,0.578596234326046,6.03165135757089,1.63171705145613,1.47529281905711,0.551873492609465,2.56880943980467,2.57865710502847,0.983609672260053,4.79694761688309,1.26203287766503,0.780877488593277,0.861693590931196,2.86762557543062,1.33679204449436,1.41538265394416,1.61924280669958,1.75353514746787,2.37172666767914,0.642642632843614,0.567760340833074,0.35613120733451,0.651547837414304,0.329940245945071,0,0.971122544619926,2.72091201268276,0.943025398779491,1.18120757152309,0.922305443831782,0.516856586336442,0.727067458955011,1.42598951353889,0.632073515871632,1.05418608574999,1.03135543248187,0,0.720244376125241,1.29358683782755,0.857348140126369,0.532020700926821,1.60531935841864,0.658196082408484,0,0.938686832254841,0.847328283455281,0,0.8244312647074,1.29171541356724,0.120625849856312,0.835606408021955,0.656563598980245,2.62332752966866,2.59595422814714,0.683483523191411,1.03193433981611,1.48155621895769,0.753473828018764,0.820165366326151,0.915112692826091,0.679913719975421,0,1.24379976423981,0.954670618015114,1.73984796469624,1.42323626988794,1.18805874903981,0.418176592028937,0.436725127492355,0.944050424693745,0.991841468704031,2.87931536182433,1.68499465279331,0.6213393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| ||
|short_description=p@chr10:127520947..127520994,+ | |short_description=p@chr10:127520947..127520994,+ | ||
}} | }} |
Latest revision as of 02:13, 4 August 2015
Short description: | p@chr10:127520947..127520994, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127520947..127520994, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.96e-11 | 70 |
CNS neuron (sensu Vertebrata) | 8.22e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.22e-10 | 23 |
neural cell | 2.97e-08 | 43 |
ectodermal cell | 1.07e-07 | 44 |
neurectodermal cell | 1.07e-07 | 44 |
somatic stem cell | 3.25e-07 | 91 |
multi fate stem cell | 3.25e-07 | 91 |
neuron | 6.54e-07 | 33 |
neuronal stem cell | 6.54e-07 | 33 |
neuroblast | 6.54e-07 | 33 |
electrically signaling cell | 6.54e-07 | 33 |
stem cell | 6.68e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.69e-09 | 34 |
brain grey matter | 3.56e-07 | 29 |
regional part of telencephalon | 3.56e-07 | 29 |
telencephalon | 3.56e-07 | 29 |
central nervous system | 4.92e-07 | 73 |
occipital lobe | 6.25e-07 | 10 |
visual cortex | 6.25e-07 | 10 |
neocortex | 6.25e-07 | 10 |