FFCP PHASE1:Mm9::chr19:4121438..4121486,-: Difference between revisions
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{{FFCP|EntrezGene=11632|HGNC=|MCL_coexpression_id=3|UniProt=O08915|association_with_transcript=88bp_to_ENSMUST00000025767,uc008fyp.1_5end|description=CAGE_peak_2_at_Aip_5end|id=chr19:4121438..4121486,-|ontology_enrichment_celltype=CL:0000144!6.77e-22!121;CL:0000012!6.77e-22!121;CL:0000723!7.94e-21!91;CL:0000048!7.94e-21!91;CL:0002371!1.08e-20!118;CL:0000034!2.55e-20!97;CL:0000548!1.01e-18!115;CL:0000004!1.01e-18!115;CL:0000255!1.01e-18!115;CL:0000219!1.02e-15!54;CL:0002320!2.91e-12!46;CL:0000134!2.91e-12!46;CL:0000055!4.59e-11!50;CL:0002031!2.38e-10!25;CL:0000988!3.42e-10!32;CL:0002032!3.42e-10!32;CL:0000037!3.42e-10!32;CL:0000566!3.42e-10!32;CL:0000837!3.42e-10!32;CL:0000221!4.56e-10!44;CL:0000133!4.56e-10!44;CL:0002319!1.26e-09!43;CL:0000063!1.01e-08!66;CL:0000738!2.35e-08!17;CL:0002087!2.35e-08!17;CL:0000117!3.75e-08!23;CL:0000337!3.75e-08!23;CL:0000838!1.12e-07!12;CL:0000393!1.43e-07!39;CL:0000211!1.43e-07!39;CL:0000542!3.78e-07!13;CL:0000051!3.78e-07!13;CL:0000084!4.16e-07!11;CL:0000827!4.16e-07!11|ontology_enrichment_celltype_v019_2=CL:0000723,7.94e-21,91;CL:0000048,7.94e-21,91;CL:0000034,2.55e-20,97;CL:0000219,1.02e-15,54;CL:0002320,2.91e-12,46;CL:0000134,2.91e-12,46;CL:0002031,2.38e-10,25;CL:0000988,3.42e-10,32;CL:0002032,3.42e-10,32;CL:0000037,3.42e-10,32;CL:0000837,3.42e-10,32;CL:0000221,4.56e-10,44;CL:0000133,4.56e-10,44;CL:0002319,1.26e-09,43;CL:0000738,2.35e-08,17;CL:0002087,2.35e-08,17;CL:0000117,3.75e-08,23;CL:0000337,3.75e-08,23;CL:0000838,1.12e-07,12;CL:0000393,1.43e-07,39;CL:0000211,1.43e-07,39;CL:0000542,3.78e-07,13;CL:0000051,3.78e-07,13;CL:0000084,4.16e-07,11;CL:0000827,4.16e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.91e-12!46;UBERON:0000073!1.18e-11!75;UBERON:0001016!1.18e-11!75;UBERON:0001017!7.04e-11!73;UBERON:0005743!7.04e-11!73;UBERON:0001049!1.91e-09!52;UBERON:0005068!1.91e-09!52;UBERON:0006241!1.91e-09!52;UBERON:0007135!1.91e-09!52;UBERON:0000955!7.24e-09!50;UBERON:0006238!7.24e-09!50;UBERON:0002616!1.29e-08!49;UBERON:0007811!3.21e-08!86;UBERON:0002204!4.58e-08!32;UBERON:0002193!4.97e-07!48;UBERON:0002390!6.07e-07!45;UBERON:0003061!6.07e-07!45;UBERON:0000153!6.68e-07!94;UBERON:0002020!8.18e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.91e-12,46;UBERON:0001016,1.18e-11,75;UBERON:0001017,7.04e-11,73;UBERON:0000073,2.34e-10,54;UBERON:0001049,1.91e-09,52;UBERON:0005068,1.91e-09,52;UBERON:0006241,1.91e-09,52;UBERON:0007135,1.91e-09,52;UBERON:0002204,4.58e-08,32;UBERON:0000955,1.11e-07,47;UBERON:0006238,1.11e-07,47;UBERON:0002616,1.93e-07,46;UBERON:0002193,4.97e-07,48;UBERON:0002405,4.97e-07,48;UBERON:0002390,6.07e-07,45;UBERON:0003061,6.07e-07,45;UBERON:0002020,8.18e-07,34|phase1_expression=9.12848428497326,10.1202868215415,6.3699893514535,5.14189159221611,3.00537437967808,6.5472916045637,3.97141489012394,26.4702813055231,12.9525624379533,10.0647746318457,14.8959632356189,13.4814948702119,21.5712919713319,24.6525534821573,5.99597571268193,8.90891176515234,6.99561878128147,17.5081501773822,15.0825876966313,14.429248161133,7.05859308253879,13.007114607316,16.7167865048919,4.15980299262857,8.94696196161963,10.9104073181854,13.3536218809313,8.18790684206378,7.22088993934221,6.04872311423834,7.31710685162506,7.62036808151557,8.61090702618398,15.8481681015439,4.91047753577167,5.81821258754723,4.49172583777212,49.805264057692,56.2561448057136,54.9699931172488,65.8819266594736,43.0318655523821,61.6598148349565,9.69405498411945,10.0363161907319,8.62669735159903,16.4302182313088,13.5175596955877,13.8402295122717,10.4992145500113,10.7789544651529,10.062679505548,16.9460432118314,13.7818806982155,23.8626597391149,11.5766746216176,11.747871037489,11.3447860301037,8.49729135610311,8.46385566835253,5.70448263155561,17.6199156675949,25.789549087223,26.5470416598013,17.7995945262055,22.7353636782752,10.4860038681442,15.7529505181837,10.5763404554647,10.3954572515402,12.4091727197315,13.4255962669788,14.3564551618549,9.18680994112155,10.8305382250607,10.1114066527102,12.1127469099328,13.2794831608595,13.5173749265494,9.23204014111357,9.69769022185542,9.89735404057844,20.9387249251036,15.757353080887,12.835052813252,8.83885756421003,11.2473627831291,11.183966749518,12.1919171266426,11.4868771362314,6.95674772884027,5.16254326188832,2.719885334831,6.47643829965381,5.19821133958135,5.82434953226536,8.42666520790511,18.4064748384302,26.7579584740955,24.7337702157238,13.3801248787846,12.8326477414318,0,0,5.84525810730278,5.82727690592727,3.0331466700887,8.22123933977232,12.9468941823586,7.57054909230606,7.63335437770998,9.43842982767638,5.5347719341454,9.79697163592047,4.11560474974967,9.42499434972566,2.71914464507811,4.48258006451726,11.4999371753484,4.36770494858005,5.96272099843063,5.81850303762267,1.86391761218122,8.49064311333487,10.6817820474862,3.57639877292028,10.1842855830032,15.5974710058286,8.51370521389534,7.33974133083631,5.03250663100489,7.66491547888473,7.82209440865244,6.64860189058859,10.5971902725376,7.13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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11632 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O08915 | |||
|association_with_transcript=88bp_to_ENSMUST00000025767,uc008fyp.1_5end | |||
|cluster_id=chr19:4121438..4121486,- | |||
|description=CAGE_peak_2_at_Aip_5end | |||
|id=chr19:4121438..4121486,- | |||
|ontology_enrichment_celltype=CL:0000144!6.77e-22!121;CL:0000012!6.77e-22!121;CL:0000723!7.94e-21!91;CL:0000048!7.94e-21!91;CL:0002371!1.08e-20!118;CL:0000034!2.55e-20!97;CL:0000548!1.01e-18!115;CL:0000004!1.01e-18!115;CL:0000255!1.01e-18!115;CL:0000219!1.02e-15!54;CL:0002320!2.91e-12!46;CL:0000134!2.91e-12!46;CL:0000055!4.59e-11!50;CL:0002031!2.38e-10!25;CL:0000988!3.42e-10!32;CL:0002032!3.42e-10!32;CL:0000037!3.42e-10!32;CL:0000566!3.42e-10!32;CL:0000837!3.42e-10!32;CL:0000221!4.56e-10!44;CL:0000133!4.56e-10!44;CL:0002319!1.26e-09!43;CL:0000063!1.01e-08!66;CL:0000738!2.35e-08!17;CL:0002087!2.35e-08!17;CL:0000117!3.75e-08!23;CL:0000337!3.75e-08!23;CL:0000838!1.12e-07!12;CL:0000393!1.43e-07!39;CL:0000211!1.43e-07!39;CL:0000542!3.78e-07!13;CL:0000051!3.78e-07!13;CL:0000084!4.16e-07!11;CL:0000827!4.16e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,7.94e-21,91;CL:0000048,7.94e-21,91;CL:0000034,2.55e-20,97;CL:0000219,1.02e-15,54;CL:0002320,2.91e-12,46;CL:0000134,2.91e-12,46;CL:0002031,2.38e-10,25;CL:0000988,3.42e-10,32;CL:0002032,3.42e-10,32;CL:0000037,3.42e-10,32;CL:0000837,3.42e-10,32;CL:0000221,4.56e-10,44;CL:0000133,4.56e-10,44;CL:0002319,1.26e-09,43;CL:0000738,2.35e-08,17;CL:0002087,2.35e-08,17;CL:0000117,3.75e-08,23;CL:0000337,3.75e-08,23;CL:0000838,1.12e-07,12;CL:0000393,1.43e-07,39;CL:0000211,1.43e-07,39;CL:0000542,3.78e-07,13;CL:0000051,3.78e-07,13;CL:0000084,4.16e-07,11;CL:0000827,4.16e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.91e-12!46;UBERON:0000073!1.18e-11!75;UBERON:0001016!1.18e-11!75;UBERON:0001017!7.04e-11!73;UBERON:0005743!7.04e-11!73;UBERON:0001049!1.91e-09!52;UBERON:0005068!1.91e-09!52;UBERON:0006241!1.91e-09!52;UBERON:0007135!1.91e-09!52;UBERON:0000955!7.24e-09!50;UBERON:0006238!7.24e-09!50;UBERON:0002616!1.29e-08!49;UBERON:0007811!3.21e-08!86;UBERON:0002204!4.58e-08!32;UBERON:0002193!4.97e-07!48;UBERON:0002390!6.07e-07!45;UBERON:0003061!6.07e-07!45;UBERON:0000153!6.68e-07!94;UBERON:0002020!8.18e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.91e-12,46;UBERON:0001016,1.18e-11,75;UBERON:0001017,7.04e-11,73;UBERON:0000073,2.34e-10,54;UBERON:0001049,1.91e-09,52;UBERON:0005068,1.91e-09,52;UBERON:0006241,1.91e-09,52;UBERON:0007135,1.91e-09,52;UBERON:0002204,4.58e-08,32;UBERON:0000955,1.11e-07,47;UBERON:0006238,1.11e-07,47;UBERON:0002616,1.93e-07,46;UBERON:0002193,4.97e-07,48;UBERON:0002405,4.97e-07,48;UBERON:0002390,6.07e-07,45;UBERON:0003061,6.07e-07,45;UBERON:0002020,8.18e-07,34 | |||
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| |||
|short_description=p2@Aip | |||
}} |
Revision as of 02:11, 4 August 2015
Short description: | p2@Aip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aip_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 88bp_to_ENSMUST00000025767, uc008fyp.1_5end |
EntrezGene: | 11632 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 7.94e-21 | 91 |
multi fate stem cell | 7.94e-21 | 91 |
stem cell | 2.55e-20 | 97 |
motile cell | 1.02e-15 | 54 |
connective tissue cell | 2.91e-12 | 46 |
mesenchymal cell | 2.91e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 2.38e-10 | 25 |
hematopoietic cell | 3.42e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-10 | 32 |
hematopoietic stem cell | 3.42e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-10 | 32 |
ectodermal cell | 4.56e-10 | 44 |
neurectodermal cell | 4.56e-10 | 44 |
neural cell | 1.26e-09 | 43 |
leukocyte | 2.35e-08 | 17 |
nongranular leukocyte | 2.35e-08 | 17 |
CNS neuron (sensu Vertebrata) | 3.75e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.75e-08 | 23 |
lymphoid lineage restricted progenitor cell | 1.12e-07 | 12 |
electrically responsive cell | 1.43e-07 | 39 |
electrically active cell | 1.43e-07 | 39 |
lymphocyte | 3.78e-07 | 13 |
common lymphoid progenitor | 3.78e-07 | 13 |
T cell | 4.16e-07 | 11 |
pro-T cell | 4.16e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.91e-12 | 46 |
nervous system | 1.18e-11 | 75 |
central nervous system | 7.04e-11 | 73 |
regional part of nervous system | 2.34e-10 | 54 |
neural tube | 1.91e-09 | 52 |
neural rod | 1.91e-09 | 52 |
future spinal cord | 1.91e-09 | 52 |
neural keel | 1.91e-09 | 52 |
musculoskeletal system | 4.58e-08 | 32 |
brain | 1.11e-07 | 47 |
future brain | 1.11e-07 | 47 |
regional part of brain | 1.93e-07 | 46 |
hemolymphoid system | 4.97e-07 | 48 |
immune system | 4.97e-07 | 48 |
hematopoietic system | 6.07e-07 | 45 |
blood island | 6.07e-07 | 45 |
gray matter | 8.18e-07 | 34 |