FFCP PHASE1:Mm9::chr7:116903722..116903727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1723 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:116903722..116903727,- | |||
|description=CAGE_peak_at_chr7:116903722..116903727,- | |description=CAGE_peak_at_chr7:116903722..116903727,- | ||
|id=chr7:116903722..116903727,- | |id=chr7:116903722..116903727,- | ||
|ontology_enrichment_celltype=CL:0000117!5.72e-12!23;CL:0000337!5.72e-12!23;CL:0002610!1.45e-08!3;CL:0000540!1.51e-07!33;CL:0000047!1.51e-07!33;CL:0000031!1.51e-07!33;CL:0000404!1.51e-07!33;CL:0002612!4.37e-07!3 | |ontology_enrichment_celltype=CL:0000117!5.72e-12!23;CL:0000337!5.72e-12!23;CL:0002610!1.45e-08!3;CL:0000540!1.51e-07!33;CL:0000047!1.51e-07!33;CL:0000031!1.51e-07!33;CL:0000404!1.51e-07!33;CL:0002612!4.37e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.31e-33,3;CL:0002614,2.04e-15,3;CL:0000117,3.76e-12,23;CL:0000337,3.76e-12,23;CL:0000540,1.57e-08,33;CL:0000047,1.57e-08,33;CL:0000031,1.57e-08,33;CL:0000404,1.57e-08,33;CL:0000393,3.07e-07,39;CL:0000211,3.07e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.24e-21!50;UBERON:0006238!2.24e-21!50;UBERON:0001017!3.54e-20!73;UBERON:0005743!3.54e-20!73;UBERON:0002616!1.00e-19!49;UBERON:0001049!1.46e-19!52;UBERON:0005068!1.46e-19!52;UBERON:0006241!1.46e-19!52;UBERON:0007135!1.46e-19!52;UBERON:0000073!1.87e-19!75;UBERON:0001016!1.87e-19!75;UBERON:0000033!3.24e-17!63;UBERON:0002346!4.96e-14!71;UBERON:0003075!4.96e-14!71;UBERON:0007284!4.96e-14!71;UBERON:0004121!1.43e-13!102;UBERON:0000924!1.43e-13!102;UBERON:0006601!1.43e-13!102;UBERON:0002020!1.45e-13!34;UBERON:0003080!4.16e-11!40;UBERON:0007811!5.33e-11!86;UBERON:0003076!2.10e-10!12;UBERON:0003057!2.10e-10!12;UBERON:0002780!7.13e-10!39;UBERON:0001890!7.13e-10!39;UBERON:0006240!7.13e-10!39;UBERON:0002298!9.02e-10!6;UBERON:0000153!1.47e-09!94;UBERON:0003056!1.52e-09!49;UBERON:0002619!2.17e-09!17;UBERON:0002791!6.17e-09!29;UBERON:0003528!6.17e-09!29;UBERON:0001893!6.17e-09!29;UBERON:0004684!1.45e-08!3;UBERON:0002275!1.45e-08!3;UBERON:0000025!2.94e-08!114;UBERON:0002021!4.42e-08!10;UBERON:0000411!4.42e-08!10;UBERON:0001950!4.42e-08!10;UBERON:0004111!2.58e-07!122;UBERON:0001948!2.62e-07!5;UBERON:0002315!2.62e-07!5;UBERON:0000956!2.81e-07!21;UBERON:0001869!2.81e-07!21;UBERON:0000203!2.81e-07!21;UBERON:0002257!4.37e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.31e-33,3;UBERON:0002275,1.31e-33,3;UBERON:0002038,2.04e-15,3;UBERON:0009663,2.04e-15,3;UBERON:0009661,2.04e-15,3;UBERON:0000125,2.04e-15,3;UBERON:0002308,2.04e-15,3;UBERON:0002950,8.11e-12,4;UBERON:0001891,8.11e-12,4;UBERON:0009616,8.11e-12,4;UBERON:0010286,8.11e-12,4;UBERON:0000073,2.36e-07,54;UBERON:0001017,2.53e-07,73;UBERON:0001016,4.00e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,5.2351808614927,1.68967186581868,0,0.0914876436024097,0,1.11673199600552,0,1.5279824777681,0.589257170947335,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.748953197024114,0,0,0,0.767146371990992,0.62336413367868,0.811206315338788,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565105371014073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.68741272937475,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,5.2351808614927,1.68967186581868,0,0.0914876436024097,0,1.11673199600552,0,1.5279824777681,0.589257170947335,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.748953197024114,0,0,0,0.767146371990992,0.62336413367868,0.811206315338788,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565105371014073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.68741272937475,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:116903722..116903727,- | |short_description=p@chr7:116903722..116903727,- | ||
}} | }} |
Latest revision as of 00:48, 4 August 2015
Short description: | p@chr7:116903722..116903727, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:116903722..116903727, - |
Coexpression cluster: | MCL_coexpression_mm9:1723 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.31e-33 | 3 |
neuron of the substantia nigra | 2.04e-15 | 3 |
CNS neuron (sensu Vertebrata) | 3.76e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.76e-12 | 23 |
neuron | 1.57e-08 | 33 |
neuronal stem cell | 1.57e-08 | 33 |
neuroblast | 1.57e-08 | 33 |
electrically signaling cell | 1.57e-08 | 33 |
electrically responsive cell | 3.07e-07 | 39 |
electrically active cell | 3.07e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.31e-33 | 3 |
reticular formation | 1.31e-33 | 3 |
substantia nigra | 2.04e-15 | 3 |
telencephalic nucleus | 2.04e-15 | 3 |
midbrain nucleus | 2.04e-15 | 3 |
neural nucleus | 2.04e-15 | 3 |
nucleus of brain | 2.04e-15 | 3 |
regional part of midbrain | 8.11e-12 | 4 |
midbrain | 8.11e-12 | 4 |
presumptive midbrain | 8.11e-12 | 4 |
midbrain neural tube | 8.11e-12 | 4 |
regional part of nervous system | 2.36e-07 | 54 |
central nervous system | 2.53e-07 | 73 |
nervous system | 4.00e-07 | 75 |