FFCP PHASE1:Mm9::chr16:65563029..65563092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:65563029..65563092,+ | |||
|description=CAGE_peak_at_chr16:65563029..65563092,+ | |description=CAGE_peak_at_chr16:65563029..65563092,+ | ||
|id=chr16:65563029..65563092,+ | |id=chr16:65563029..65563092,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.47e-08!43;CL:0000221!5.01e-08!44;CL:0000133!5.01e-08!44;CL:0000117!2.48e-07!23;CL:0000337!2.48e-07!23 | |ontology_enrichment_celltype=CL:0002319!3.47e-08!43;CL:0000221!5.01e-08!44;CL:0000133!5.01e-08!44;CL:0000117!2.48e-07!23;CL:0000337!2.48e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.95e-08,43;CL:0000221,5.72e-08,44;CL:0000133,5.72e-08,44;CL:0000117,1.52e-07,23;CL:0000337,1.52e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.63e-26!73;UBERON:0005743!4.63e-26!73;UBERON:0000073!3.93e-24!75;UBERON:0001016!3.93e-24!75;UBERON:0000955!2.48e-22!50;UBERON:0006238!2.48e-22!50;UBERON:0001049!2.49e-22!52;UBERON:0005068!2.49e-22!52;UBERON:0006241!2.49e-22!52;UBERON:0007135!2.49e-22!52;UBERON:0002616!5.59e-22!49;UBERON:0000033!6.44e-21!63;UBERON:0003080!3.37e-17!40;UBERON:0002346!1.01e-16!71;UBERON:0003075!1.01e-16!71;UBERON:0007284!1.01e-16!71;UBERON:0002780!1.11e-16!39;UBERON:0001890!1.11e-16!39;UBERON:0006240!1.11e-16!39;UBERON:0004121!1.81e-16!102;UBERON:0000924!1.81e-16!102;UBERON:0006601!1.81e-16!102;UBERON:0003056!6.10e-16!49;UBERON:0002020!4.60e-13!34;UBERON:0002791!6.39e-12!29;UBERON:0003528!6.39e-12!29;UBERON:0001893!6.39e-12!29;UBERON:0007811!3.68e-09!86;UBERON:0000153!8.37e-09!94;UBERON:0000956!1.61e-08!21;UBERON:0001869!1.61e-08!21;UBERON:0000203!1.61e-08!21;UBERON:0002619!5.19e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!4.63e-26!73;UBERON:0005743!4.63e-26!73;UBERON:0000073!3.93e-24!75;UBERON:0001016!3.93e-24!75;UBERON:0000955!2.48e-22!50;UBERON:0006238!2.48e-22!50;UBERON:0001049!2.49e-22!52;UBERON:0005068!2.49e-22!52;UBERON:0006241!2.49e-22!52;UBERON:0007135!2.49e-22!52;UBERON:0002616!5.59e-22!49;UBERON:0000033!6.44e-21!63;UBERON:0003080!3.37e-17!40;UBERON:0002346!1.01e-16!71;UBERON:0003075!1.01e-16!71;UBERON:0007284!1.01e-16!71;UBERON:0002780!1.11e-16!39;UBERON:0001890!1.11e-16!39;UBERON:0006240!1.11e-16!39;UBERON:0004121!1.81e-16!102;UBERON:0000924!1.81e-16!102;UBERON:0006601!1.81e-16!102;UBERON:0003056!6.10e-16!49;UBERON:0002020!4.60e-13!34;UBERON:0002791!6.39e-12!29;UBERON:0003528!6.39e-12!29;UBERON:0001893!6.39e-12!29;UBERON:0007811!3.68e-09!86;UBERON:0000153!8.37e-09!94;UBERON:0000956!1.61e-08!21;UBERON:0001869!1.61e-08!21;UBERON:0000203!1.61e-08!21;UBERON:0002619!5.19e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.43e-27,73;UBERON:0001016,3.24e-25,75;UBERON:0000073,7.69e-25,54;UBERON:0001049,8.24e-24,52;UBERON:0005068,8.24e-24,52;UBERON:0006241,8.24e-24,52;UBERON:0007135,8.24e-24,52;UBERON:0000955,3.67e-22,47;UBERON:0006238,3.67e-22,47;UBERON:0002616,8.75e-22,46;UBERON:0002346,3.85e-21,64;UBERON:0003075,3.85e-21,64;UBERON:0007284,3.85e-21,64;UBERON:0004121,2.73e-19,95;UBERON:0000924,2.73e-19,95;UBERON:0006601,2.73e-19,95;UBERON:0003080,3.20e-18,40;UBERON:0002780,1.16e-17,39;UBERON:0001890,1.16e-17,39;UBERON:0006240,1.16e-17,39;UBERON:0003056,2.81e-16,49;UBERON:0010371,3.68e-16,73;UBERON:0002020,9.68e-14,34;UBERON:0003528,1.74e-12,29;UBERON:0002791,1.74e-12,29;UBERON:0001893,1.74e-12,29;UBERON:0000956,8.54e-09,21;UBERON:0001869,8.54e-09,21;UBERON:0000203,8.54e-09,21;UBERON:0010314,1.10e-08,92;UBERON:0002619,3.22e-08,17;UBERON:0002021,4.41e-07,10;UBERON:0000411,4.41e-07,10;UBERON:0001950,4.41e-07,10 | |||
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| ||
|short_description=p@chr16:65563029..65563092,+ | |short_description=p@chr16:65563029..65563092,+ | ||
}} | }} |
Latest revision as of 00:43, 4 August 2015
Short description: | p@chr16:65563029..65563092, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:65563029..65563092, + |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.95e-08 | 43 |
ectodermal cell | 5.72e-08 | 44 |
neurectodermal cell | 5.72e-08 | 44 |
CNS neuron (sensu Vertebrata) | 1.52e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.43e-27 | 73 |
nervous system | 3.24e-25 | 75 |
regional part of nervous system | 7.69e-25 | 54 |
neural tube | 8.24e-24 | 52 |
neural rod | 8.24e-24 | 52 |
future spinal cord | 8.24e-24 | 52 |
neural keel | 8.24e-24 | 52 |
brain | 3.67e-22 | 47 |
future brain | 3.67e-22 | 47 |
regional part of brain | 8.75e-22 | 46 |
neurectoderm | 3.85e-21 | 64 |
neural plate | 3.85e-21 | 64 |
presumptive neural plate | 3.85e-21 | 64 |
ectoderm-derived structure | 2.73e-19 | 95 |
ectoderm | 2.73e-19 | 95 |
presumptive ectoderm | 2.73e-19 | 95 |
anterior neural tube | 3.20e-18 | 40 |
regional part of forebrain | 1.16e-17 | 39 |
forebrain | 1.16e-17 | 39 |
future forebrain | 1.16e-17 | 39 |
pre-chordal neural plate | 2.81e-16 | 49 |
ecto-epithelium | 3.68e-16 | 73 |
gray matter | 9.68e-14 | 34 |
brain grey matter | 1.74e-12 | 29 |
regional part of telencephalon | 1.74e-12 | 29 |
telencephalon | 1.74e-12 | 29 |
cerebral cortex | 8.54e-09 | 21 |
cerebral hemisphere | 8.54e-09 | 21 |
pallium | 8.54e-09 | 21 |
structure with developmental contribution from neural crest | 1.10e-08 | 92 |
regional part of cerebral cortex | 3.22e-08 | 17 |
occipital lobe | 4.41e-07 | 10 |
visual cortex | 4.41e-07 | 10 |
neocortex | 4.41e-07 | 10 |