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FFCP PHASE1:Mm9::chr5:141306384..141306407,-: Difference between revisions

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{{FFCP|EntrezGene=14673|HGNC=|MCL_coexpression_id=2418|UniProt=P27600|association_with_transcript=0bp_to_ENSMUST00000000153,NM_010302,uc009aih.1_5end|description=CAGE_peak_1_at_Gna12_5end|id=chr5:141306384..141306407,-|ontology_enrichment_celltype=CL:0000221!9.60e-14!44;CL:0000133!9.60e-14!44;CL:0002319!2.60e-13!43;CL:0000055!1.42e-10!50;CL:0000540!2.50e-08!33;CL:0000047!2.50e-08!33;CL:0000031!2.50e-08!33;CL:0000404!2.50e-08!33;CL:0000117!9.16e-07!23;CL:0000337!9.16e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,9.60e-14,44;CL:0000133,9.60e-14,44;CL:0002319,2.60e-13,43;CL:0000540,2.50e-08,33;CL:0000047,2.50e-08,33;CL:0000031,2.50e-08,33;CL:0000404,2.50e-08,33;CL:0000117,9.16e-07,23;CL:0000337,9.16e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.69e-11!75;UBERON:0001016!5.69e-11!75;UBERON:0000025!3.51e-10!114;UBERON:0001017!4.27e-10!73;UBERON:0005743!4.27e-10!73;UBERON:0004121!7.37e-10!102;UBERON:0000924!7.37e-10!102;UBERON:0006601!7.37e-10!102;UBERON:0004111!1.31e-09!122|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.69e-11,75;UBERON:0000025,3.51e-10,114;UBERON:0001017,4.27e-10,73;UBERON:0010314,8.14e-10,92;UBERON:0004111,1.31e-09,122;UBERON:0004121,7.95e-09,95;UBERON:0000924,7.95e-09,95;UBERON:0006601,7.95e-09,95|phase1_expression=28.1861970904437,15.3549179361319,16.3799726180233,3.0246421130683,7.51343594919521,12.9267039372155,7.00837921786577,6.45616617207881,5.490760163915,6.31974221069382,3.76679530096111,5.74359544766422,4.45121897821135,3.58423649917889,8.66085380720723,11.7435655086099,7.69518065940961,3.62781490161973,7.26706498110415,2.97072756258621,18.3693506726311,11.8156231929054,9.14199261986274,6.39969691173627,9.1763712426868,12.6331032105304,9.04600191934057,8.83432054012145,3.42042155021473,3.02436155711917,7.09537634096975,6.35030673459631,6.1506478758457,0,8.95440021228951,7.97926297720763,7.75843553797003,12.1374172913703,9.37602413428561,11.5175223674236,14.1175557127443,18.442228093878,19.4204141212461,9.4422613481683,10.9487085717076,13.7660064121261,28.9484797408774,37.9363772101977,32.9529274101708,34.8029519342967,20.5780039789283,40.250718022192,6.87908684836719,7.25362142011344,6.72187598284928,21.6097926270195,15.4728057566929,9.7977697532714,28.7289374420629,21.6886301501533,13.3104594736298,31.8513860144984,14.2287167377782,68.842328372027,59.3319817540185,78.152812644071,58.7216216616073,82.6069356441342,31.6253317540857,29.1612826796452,29.8661445118962,24.2803336743233,21.6451170132581,19.5985278743926,28.6577958344527,22.9804696652505,27.5289702498472,29.6234624357635,29.4924543851987,26.3772575460388,24.8846390598554,22.3992749339407,29.0350318961436,24.7615548413939,31.0180442986925,17.0884579574727,15.9456282494995,20.1311401491325,30.5176559132732,30.5309102831413,11.8844440367688,17.2084775396277,19.7191686775248,27.5248627735287,20.7928453583254,34.4980703064948,19.1004411379183,12.2709832256202,9.61208217030615,7.77347063922748,27.8869971157827,10.2661181931454,7.64415719119937,28.4426681261332,7.79367747640371,8.10751569520315,7.58286667522175,20.2105467102736,13.7237078333001,28.797774978576,20.6447538851702,16.1366703505435,17.2961622942044,18.0867168663147,21.7539108201054,31.1653146497595,13.1013332899218,19.9547112549478,18.5768215909474,18.2796540440572,17.2256384399107,12.6067565815158,1.86391761218122,13.1751358655196,17.8029700791437,9.70736809792647,13.0598485711453,13.7977628128484,14.4860058863294,27.2618963716777,18.3000241127451,18.7224984648168,18.4253779403813,18.1557974704535,33.4538751740892,22.064811777215,25.8671984179803,14.680022531991,9.09801930361229,15.1518136238261,15.6144531555244,17.4725599369439,19.9868964083938,15.5225962370787,21.2273877352143,22.9323559309881,28.9538328889562,7.76110112217047,16.8143034487617,19.6670323374532,16.1875034230833,15.1245055375027,14.4584569597311,14.9748431604532,9.87754254758129,19.3063238813938,9.83098462238529,15.1835265197682,20.7439354558783,23.1980865239762,17.5894544985822,16.0255234700303,21.5437709382541,16.1346670032871,17.4321837562737,23.0208605302904,24.681152928765,22.5357110768637,27.8106146353782,23.8042822914688,37.0484459624561,39.3277966174144,28.9806152184187,42.5434347470378,19.3466752678997,34.4730451470603,2.97376904685418,6.08236303326152,16.8497717922835,14.8631469990681,19.330119198314,14.5212137728807,10.8965241483986,11.9842144450912,13.2868137232463,11.3642278759568,11.0587491872119,11.7384318504279,10.7230247915516,4.49409704327111,7.5648317456143,10.7536287557358,16.5011073829181,14.2810640762161,20.2873924211545,20.5687841123767,18.2315337937568,24.5475369616115,28.7726243915371,29.3744194479408,24.8057989989372,26.1601987514217,30.2381679628892,13.1807633515714,15.9212786041694,13.9414509678609,11.3601667977562,11.576503668116,8.40265310878685,9.20627639842594,14.4300351829781,16.748246204473,27.3159592401974,26.0498663367952,20.2824487524464,22.9846778931872,20.451305141498,27.499280717711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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:14673
|HGNC=
|MCL_coexpression_id=2418
|TSSclassifier=NA
|UniProt=uniprot:P27600
|association_with_transcript=0bp_to_ENSMUST00000000153,NM_010302,uc009aih.1_5end
|cluster_id=chr5:141306384..141306407,-
|description=CAGE_peak_1_at_Gna12_5end
|id=chr5:141306384..141306407,-
|ontology_enrichment_celltype=CL:0000221!9.60e-14!44;CL:0000133!9.60e-14!44;CL:0002319!2.60e-13!43;CL:0000055!1.42e-10!50;CL:0000540!2.50e-08!33;CL:0000047!2.50e-08!33;CL:0000031!2.50e-08!33;CL:0000404!2.50e-08!33;CL:0000117!9.16e-07!23;CL:0000337!9.16e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000221,9.60e-14,44;CL:0000133,9.60e-14,44;CL:0002319,2.60e-13,43;CL:0000540,2.50e-08,33;CL:0000047,2.50e-08,33;CL:0000031,2.50e-08,33;CL:0000404,2.50e-08,33;CL:0000117,9.16e-07,23;CL:0000337,9.16e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.69e-11!75;UBERON:0001016!5.69e-11!75;UBERON:0000025!3.51e-10!114;UBERON:0001017!4.27e-10!73;UBERON:0005743!4.27e-10!73;UBERON:0004121!7.37e-10!102;UBERON:0000924!7.37e-10!102;UBERON:0006601!7.37e-10!102;UBERON:0004111!1.31e-09!122
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.69e-11,75;UBERON:0000025,3.51e-10,114;UBERON:0001017,4.27e-10,73;UBERON:0010314,8.14e-10,92;UBERON:0004111,1.31e-09,122;UBERON:0004121,7.95e-09,95;UBERON:0000924,7.95e-09,95;UBERON:0006601,7.95e-09,95
|phase1_expression=28.1861970904437,15.3549179361319,16.3799726180233,3.0246421130683,7.51343594919521,12.9267039372155,7.00837921786577,6.45616617207881,5.490760163915,6.31974221069382,3.76679530096111,5.74359544766422,4.45121897821135,3.58423649917889,8.66085380720723,11.7435655086099,7.69518065940961,3.62781490161973,7.26706498110415,2.97072756258621,18.3693506726311,11.8156231929054,9.14199261986274,6.39969691173627,9.1763712426868,12.6331032105304,9.04600191934057,8.83432054012145,3.42042155021473,3.02436155711917,7.09537634096975,6.35030673459631,6.1506478758457,0,8.95440021228951,7.97926297720763,7.75843553797003,12.1374172913703,9.37602413428561,11.5175223674236,14.1175557127443,18.442228093878,19.4204141212461,9.4422613481683,10.9487085717076,13.7660064121261,28.9484797408774,37.9363772101977,32.9529274101708,34.8029519342967,20.5780039789283,40.250718022192,6.87908684836719,7.25362142011344,6.72187598284928,21.6097926270195,15.4728057566929,9.7977697532714,28.7289374420629,21.6886301501533,13.3104594736298,31.8513860144984,14.2287167377782,68.842328372027,59.3319817540185,78.152812644071,58.7216216616073,82.6069356441342,31.6253317540857,29.1612826796452,29.8661445118962,24.2803336743233,21.6451170132581,19.5985278743926,28.6577958344527,22.9804696652505,27.5289702498472,29.6234624357635,29.4924543851987,26.3772575460388,24.8846390598554,22.3992749339407,29.0350318961436,24.7615548413939,31.0180442986925,17.0884579574727,15.9456282494995,20.1311401491325,30.5176559132732,30.5309102831413,11.8844440367688,17.2084775396277,19.7191686775248,27.5248627735287,20.7928453583254,34.4980703064948,19.1004411379183,12.2709832256202,9.61208217030615,7.77347063922748,27.8869971157827,10.2661181931454,7.64415719119937,28.4426681261332,7.79367747640371,8.10751569520315,7.58286667522175,20.2105467102736,13.7237078333001,28.797774978576,20.6447538851702,16.1366703505435,17.2961622942044,18.0867168663147,21.7539108201054,31.1653146497595,13.1013332899218,19.9547112549478,18.5768215909474,18.2796540440572,17.2256384399107,12.6067565815158,1.86391761218122,13.1751358655196,17.8029700791437,9.70736809792647,13.0598485711453,13.7977628128484,14.4860058863294,27.2618963716777,18.3000241127451,18.7224984648168,18.4253779403813,18.1557974704535,33.4538751740892,22.064811777215,25.8671984179803,14.680022531991,9.09801930361229,15.1518136238261,15.6144531555244,17.4725599369439,19.9868964083938,15.5225962370787,21.2273877352143,22.9323559309881,28.9538328889562,7.76110112217047,16.8143034487617,19.6670323374532,16.1875034230833,15.1245055375027,14.4584569597311,14.9748431604532,9.87754254758129,19.3063238813938,9.83098462238529,15.1835265197682,20.7439354558783,23.1980865239762,17.5894544985822,16.0255234700303,21.5437709382541,16.1346670032871,17.4321837562737,23.0208605302904,24.681152928765,22.5357110768637,27.8106146353782,23.8042822914688,37.0484459624561,39.3277966174144,28.9806152184187,42.5434347470378,19.3466752678997,34.4730451470603,2.97376904685418,6.08236303326152,16.8497717922835,14.8631469990681,19.330119198314,14.5212137728807,10.8965241483986,11.9842144450912,13.2868137232463,11.3642278759568,11.0587491872119,11.7384318504279,10.7230247915516,4.49409704327111,7.5648317456143,10.7536287557358,16.5011073829181,14.2810640762161,20.2873924211545,20.5687841123767,18.2315337937568,24.5475369616115,28.7726243915371,29.3744194479408,24.8057989989372,26.1601987514217,30.2381679628892,13.1807633515714,15.9212786041694,13.9414509678609,11.3601667977562,11.576503668116,8.40265310878685,9.20627639842594,14.4300351829781,16.748246204473,27.3159592401974,26.0498663367952,20.2824487524464,22.9846778931872,20.451305141498,27.4992807177119,20.6923572986597,18.9491411770485,22.0002718196735,20.3694102930226,20.4180516010997,20.938282180227,17.377185784679,25.7576415172294,22.6994607512915,26.7972274475018,35.2395038733046,17.0417847304368,23.4851575337618,20.9741134943192,39.2057338242108,28.8270012423916,8.85175691434265,10.2096596132751,32.7523203575096,39.5003383815725,14.9180800292775,20.4501451035542,15.7754109708128,18.350620981942,21.5423397732799,25.091723785018,24.9534514972281,26.3261173633614,25.0982635038434,19.8733983379692,19.3691011193797,14.4594592389813,22.1426532924899,18.5188227813945,27.8536700494615,24.7455184458803,13.2745138339963,14.3240575331439,10.883648050731,16.7858520982749,20.0805287158925,21.5204603560749,17.3146956422708,22.1755574981278,17.4683715408513,12.3254335594968,24.2462799722497,12.3762651897824,17.702859499197,20.3469036255381,22.7671283457648,17.7899739076222,24.4729522426338,23.1879462882692,21.8850197400821,22.8348711835949,9.1521966144847,13.5572525352845,10.5853631066382,12.036696464728,16.1464426695906,14.6560407575419,17.3089898804548,21.1741760671129,11.9507143018239,45.0583483885539,14.5240248678175,23.5281029478074,18.3342582096015,13.9392658183471,12.4391747226133,12.8115776995653,13.5982743995084,14.2750481370131,15.6165970398999,9.54670618015114,23.7251995185851,19.7219883113043,13.3926622619034,14.6361807210128,12.6650286972783,13.8910276776365,18.6796809939259,13.3495530411855,10.628427809927,8.07741107013003,25.3661822407886,25.8663624656083,30.444362244106,38.8902376688095,42.3644221006958,36.6634792314989,46.5908237423643,47.1339873135099,25.4808206954477,17.8772249411244,18.1458903942455,7.58426689507628,14.798940716182,13.9686901744165,10.133824192268,9.667441566044,10.7287931581883,9.73583141111748,8.27061352177632,6.96668504642219,9.75447125183998,8.36857336635776,9.06358290879698,8.08179469778768,8.99952146798081,13.1503622496823,2.21985953374065,2.6017018416748,2.3503846290971,19.7053385912834,13.8885031833875,14.6521299413812,10.5040505748742,17.0534515372024,12.9892923801925,10.1271552031579,10.3121192419091,13.2326950404639,8.22099023724771,11.3309084608455,12.1504050041725,7.65546045481175,9.06284817968409,4.14208249401456,20.2385327789145,17.5570944296454,19.6343646617254,15.5588298923708,16.5594398476106,21.6935339971017,14.6682840349066,15.658664350156,17.329637317958,19.2049880940486,13.1809235942925,15.6559863350443,15.2635657175908,19.59169663589,19.757801320731,19.0517476513229,21.4386002997983,18.9051036054431,18.5438655361488,14.7198920134397,8.22886205724997,13.665637074269,14.5446075867866,13.3718703301742,14.7751727252069,17.515223833577,14.2683818840763,9.99664903463803,14.9384525230448,9.53941861818155,15.8970924286393,17.139779933348,12.2769312950907,19.0572314658738,15.4325288784913,20.2346568129736,18.9484602840781,16.7599422157673,24.1023298406743,20.2944105589954,16.9263520002908
|short_description=p1@Gna12
}}

Revision as of 23:49, 3 August 2015

Short description:p1@Gna12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gna12_5end
Coexpression cluster:MCL_coexpression_mm9:2418
Association with transcript: 0bp_to_ENSMUST00000000153, NM_010302, uc009aih.1_5end
EntrezGene:14673
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gna12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.93
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.01
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.74
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.74
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.18
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I28.83
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C237.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C334.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C440.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C328.73
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C631.85
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C768.84
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E759.33
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D278.15
Mouse Microglia, donor1.CNhs12629.11718-123C858.72
Mouse Microglia, donor2.CNhs12634.11736-123E882.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D531.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F529.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.60
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F228.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F329.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.88
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.04
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.13
Mouse Schwann, donor1.CNhs12507.11728-123D930.52
Mouse Schwann, donor2.CNhs12573.11746-123F930.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.88
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C419.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C827.52
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F634.50
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.21
accessory axillary lymph node, adult.CNhs10475.1063-29H913.72
adrenal gland, adult.CNhs10508.49-24D728.80
adrenal gland, embryo E14.CNhs11038.406-44C520.64
adrenal gland, embryo E16.CNhs11004.1254-43D616.14
adrenal gland, embryo E17.CNhs11043.1263-45I117.30
adrenal gland, embryo E18.CNhs11026.1262-18F518.09
adrenal gland, neonate N00.CNhs11191.1311-23C121.75
adrenal gland, neonate N25.CNhs11223.1377-27I331.17
amnion, adult pregnant day17.5.CNhs10488.583-22A813.10
aorta, adult.CNhs10498.46-23H119.95
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F518.28
bone (os femoris), neonate N16.CNhs11225.1525-43A617.23
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I217.80
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.06
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.49
corpora quadrigemina, adult.CNhs10501.16-22A427.26
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F118.72
cortex, adult.CNhs10473.12-14D518.43
cortex, neonate N30.CNhs11107.1392-42F218.16
diencephalon, adult.CNhs10482.20-12F233.45
diencephalon, neonate N30.CNhs11201.1388-42B222.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.68
epididymis, adult.CNhs10490.58-23B29.10
eyeball, adult.CNhs10484.31-12G415.15
eyeball, embryo E12.CNhs11016.345-16C615.61
eyeball, embryo E14.CNhs10521.399-16E217.47
eyeball, embryo E15.CNhs10593.426-16C919.99
eyeball, embryo E17.CNhs11023.1261-18D415.52
eyeball, neonate N00.CNhs11207.633-15C621.23
eyeball, neonate N01.CNhs11140.1532-43E722.93
eyeball, neonate N02.CNhs11205.1551-44G828.95
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E216.81
forelimb, embryo E12.CNhs10600.359-14H219.67
forelimb, embryo E13.CNhs10589.384-1E216.19
forelimb, embryo E14.CNhs10577.413-26A815.12
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C414.97
forelimb, embryo E18.CNhs11008.1520-43B59.88
gonad, embryo E13.CNhs11044.1564-45I619.31
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.74
heart, embryo E11.CNhs10586.331-24E923.20
heart, embryo E12.CNhs11015.353-12F517.59
heart, embryo E13.CNhs11013.376-3I916.03
heart, embryo E14.CNhs10597.403-26D421.54
heart, embryo E15.CNhs11017.431-16C816.13
heart, embryo E16.CNhs11021.457-17C617.43
heart, embryo E17.CNhs11025.479-18E523.02
heart, embryo E18.CNhs11030.1283-20G324.68
heart, neonate N00.CNhs11213.639-21E322.54
heart, neonate N03.CNhs11221.1349-25I227.81
heart, neonate N10.CNhs11118.749-24G123.80
heart, neonate N16.CNhs11209.782-15G137.05
heart, neonate N20.CNhs11127.821-26I639.33
heart, neonate N25.CNhs11196.1351-25D328.98
heart, neonate N30.CNhs11202.1390-42D242.54
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G134.47
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I516.85
intestine, embryo E13.CNhs11010.381-16D514.86
intestine, embryo E15.CNhs10602.976-16D819.33
intestine, embryo E16.CNhs10585.463-22H414.52
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F711.98
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E911.36
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F211.74
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E37.56
intestine, neonate N30.CNhs11131.1384-42G110.75
kidney, embryo E14.CNhs10606.411-4I916.50
kidney, embryo E15.CNhs10997.434-16F814.28
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I220.57
kidney, embryo E18.CNhs11001.1288-20C718.23
kidney, neonate N00.CNhs11214.646-21G724.55
kidney, neonate N10.CNhs11206.758-6D528.77
kidney, neonate N20.CNhs11113.832-19I129.37
kidney, neonate N25.CNhs11122.1353-25F324.81
kidney, neonate N30.CNhs11203.1385-42H126.16
liver, adult pregnant day01.CNhs10466.508-5B230.24
liver, embryo E12.CNhs10601.355-15F813.18
liver, embryo E13.CNhs10524.378-3H615.92
liver, embryo E14.CNhs10594.409-16E113.94
liver, embryo E15.CNhs10520.433-16D711.36
liver, embryo E16.CNhs10523.462-17F511.58
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F414.43
liver, neonate N03.CNhs11123.1345-25G216.75
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H226.05
liver, neonate N10.CNhs11115.751-24B920.28
liver, neonate N20.CNhs11220.823-25A322.98
liver, neonate N25.CNhs11198.1368-26H120.45
liver, neonate N30.CNhs11106.1382-42D127.50
lung, adult.CNhs10474.28-22B120.69
lung, embryo E12.CNhs10522.354-16G218.95
lung, embryo E14.CNhs10604.404-26F822.00
lung, embryo E15.CNhs11020.432-17C520.37
lung, embryo E16.CNhs10998.458-17B620.42
lung, embryo E17.CNhs10605.480-44A620.94
lung, embryo E18.CNhs10583.1287-20I617.38
lung, neonate N00.CNhs11224.640-42C625.76
lung, neonate N06.CNhs11212.683-20E522.70
lung, neonate N07.CNhs11111.715-19A326.80
lung, neonate N10.CNhs11219.750-23E635.24
lung, neonate N20.CNhs11109.822-18A417.04
lung, neonate N25.CNhs11119.1359-25C723.49
lung, neonate N30.CNhs11133.1394-42H220.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A139.21
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A128.83
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C232.75
medulla oblongata, neonate N30.CNhs11200.1396-42A339.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.45
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.09
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.95
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.87
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.37
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I722.14
ovary, embryo E18.CNhs11040.505-44H718.52
ovary, neonate N00.CNhs11217.1299-22I427.85
oviduct, adult pregnant day01.CNhs10500.988-6G624.75
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F414.32
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E516.79
pancreas, embryo E17.CNhs10599.1558-45G320.08
pancreas, embryo E18.CNhs10580.1535-43I721.52
pancreas, neonate N00.CNhs11105.645-26G917.31
pancreas, neonate N01.CNhs11138.1531-43D722.18
pancreas, neonate N02.CNhs11139.1539-43D817.47
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E224.25
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G817.70
pituitary gland, embryo E12.CNhs11018.346-16E620.35
pituitary gland, embryo E13.CNhs11009.370-44C722.77
pituitary gland, embryo E14.CNhs11037.398-44A517.79
pituitary gland, embryo E15.CNhs10592.427-16B924.47
pituitary gland, embryo E16.CNhs11036.449-43F623.19
pituitary gland, embryo E17.CNhs11039.1265-44F521.89
pituitary gland, neonate N00.CNhs11190.1308-22E922.83
placenta, adult pregnant day10.CNhs10472.539-13I79.15
placenta, adult pregnant day17.CNhs10464.577-18G313.56
prostate, adult.CNhs10470.859-1F810.59
skin, adult.CNhs10492.30-1C312.04
skin, neonate N00.CNhs11124.650-25G416.15
skin, neonate N03.CNhs11215.662-22H314.66
skin, neonate N06.CNhs11097.693-20I517.31
skin, neonate N10.CNhs11108.762-6C421.17
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C945.06
spleen, adult.CNhs10465.25-2G214.52
spleen, embryo E16.CNhs11035.461-43C123.53
spleen, embryo E18.CNhs11011.1271-21F218.33
spleen, neonate N10.CNhs11116.752-24D113.94
spleen, neonate N20.CNhs11112.824-19H112.44
spleen, neonate N25.CNhs11099.1354-25G312.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.62
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E323.73
stomach, embryo E15.CNhs10603.1252-16G819.72
stomach, embryo E16.CNhs11022.459-17D413.39
stomach, embryo E17.CNhs11006.1035-18D514.64
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B813.89
stomach, neonate N07.CNhs11210.718-18A918.68
stomach, neonate N25.CNhs11104.1355-25E413.35
stomach, neonate N30.CNhs11134.1386-42I110.63
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G525.37
testis, embryo E13.CNhs11031.389-23F525.87
testis, embryo E15.CNhs11034.443-27C530.44
testis, embryo E16.CNhs11033.470-26G538.89
testis, embryo E17.CNhs11029.486-18I542.36
testis, embryo E18.CNhs11027.503-18G536.66
testis, neonate N00.CNhs11189.1300-22B746.59
testis, neonate N07.CNhs11222.726-26I447.13
testis, neonate N10.CNhs11204.763-44D925.48
testis, neonate N20.CNhs11110.839-18H317.88
testis, neonate N30.CNhs11130.1391-42E218.15
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I414.80
thymus, embryo E15.CNhs11005.430-45I213.97
thymus, embryo E16.CNhs11002.456-26C510.13
thymus, embryo E17.CNhs10581.478-18C19.67
thymus, embryo E18.CNhs10595.1273-19G410.73
thymus, neonate N02.CNhs11181.1541-43F89.74
thymus, neonate N03.CNhs11137.2104-43C78.27
thymus, neonate N06.CNhs11197.681-26C46.97
thymus, neonate N07.CNhs11211.713-19D39.75
thymus, neonate N10.CNhs11194.748-24E48.37
thymus, neonate N20.CNhs11186.820-7A29.06
thymus, neonate N25.CNhs11125.1362-25G78.08
thymus, neonate N30.CNhs11132.1393-42G29.00
tongue, adult.CNhs10499.32-1B413.15
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.60
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E419.71
uterus, adult pregnant day19.CNhs10497.590-15F513.89
uterus, adult.CNhs10509.92-27E514.65
vagina, adult.CNhs10502.89-27D510.50
vesicular gland, adult.CNhs10491.51-27F817.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I820.24
whole body, embryo E12.CNhs10587.857-27C917.56
whole body, embryo E13.CNhs10512.372-23H219.63
whole body, embryo E14.5.CNhs10578.420-27D215.56
whole body, embryo E14.CNhs10519.395-14B116.56
whole body, embryo E16.CNhs10514.453-14F221.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.33
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.91
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.06
whole body, embryo E17.5.CNhs10513.490-9F915.43
whole body, embryo E17.CNhs10517.475-3I520.23
whole body, embryo E18.CNhs10516.493-3B318.95
whole body, neonate N00.CNhs10525.657-19C216.76
whole body, neonate N01.CNhs10576.659-23C624.10
whole body, neonate N06.CNhs10515.692-21D120.29
whole body, neonate N10.CNhs10518.761-6B416.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell9.60e-1444
neurectodermal cell9.60e-1444
neural cell2.60e-1343
neuron2.50e-0833
neuronal stem cell2.50e-0833
neuroblast2.50e-0833
electrically signaling cell2.50e-0833
CNS neuron (sensu Vertebrata)9.16e-0723
neuroblast (sensu Vertebrata)9.16e-0723

Uber anatomy
Ontology termp-valuen
nervous system5.69e-1175
tube3.51e-10114
central nervous system4.27e-1073
structure with developmental contribution from neural crest8.14e-1092
anatomical conduit1.31e-09122
ectoderm-derived structure7.95e-0995
ectoderm7.95e-0995
presumptive ectoderm7.95e-0995
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