FFCP PHASE1:Mm9::chr11:75229756..75229762,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2712|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:75229756..75229762,-|id=chr11:75229756..75229762,-|ontology_enrichment_celltype=CL:0002453!4.55e-08!8|ontology_enrichment_celltype_v019_2=CL:0000182,1.65e-24,5;CL:0002605,4.86e-16,2;CL:0002604,4.86e-16,2;CL:0000192,2.47e-10,3;CL:0000359,2.47e-10,3;CL:0002539,2.47e-10,3;CL:0000514,2.47e-10,3;CL:0002453,5.94e-09,8;CL:0000219,3.23e-08,54;CL:0002321,8.30e-08,70;CL:0000333,2.88e-07,10;CL:0000095,2.88e-07,10;CL:0000243,2.88e-07,10;CL:0000123,2.88e-07,10;CL:0000125,2.88e-07,10;CL:0000030,2.88e-07,10;CL:0000339,2.88e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.38e-15!22;UBERON:0007499!4.38e-15!22;UBERON:0006925!4.38e-15!22;UBERON:0009497!4.38e-15!22;UBERON:0000015!4.38e-15!22;UBERON:0002423!4.38e-15!22;UBERON:0006235!4.38e-15!22;UBERON:0008835!4.38e-15!22;UBERON:0003894!4.38e-15!22;UBERON:0004161!4.38e-15!22;UBERON:0008836!4.38e-15!22;UBERON:0002365!2.68e-14!25;UBERON:0002330!2.68e-14!25;UBERON:0009854!3.60e-14!23;UBERON:0009856!3.60e-14!23;UBERON:0003914!8.35e-11!47;UBERON:0005256!6.33e-10!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.75e-12,22;UBERON:0007499,4.75e-12,22;UBERON:0006925,4.75e-12,22;UBERON:0009497,4.75e-12,22;UBERON:0000015,4.75e-12,22;UBERON:0002423,4.75e-12,22;UBERON:0006235,4.75e-12,22;UBERON:0008835,4.75e-12,22;UBERON:0003894,4.75e-12,22;UBERON:0004161,4.75e-12,22;UBERON:0008836,4.75e-12,22;UBERON:0009854,1.62e-11,23;UBERON:0009856,1.62e-11,23;UBERON:0002365,1.42e-10,25;UBERON:0002330,1.42e-10,25;UBERON:0001135,2.47e-10,3;UBERON:0004237,2.47e-10,3;UBERON:0004695,2.47e-10,3;UBERON:0002111,2.47e-10,3;UBERON:0004178,2.47e-10,3;UBERON:0005256,6.80e-10,45;UBERON:0003914,1.91e-09,47;UBERON:0000947,5.63e-08,4;UBERON:0001637,5.63e-08,4;UBERON:0004573,5.63e-08,4;UBERON:0003509,5.63e-08,4;UBERON:0004571,5.63e-08,4;UBERON:0010191,5.63e-08,4;UBERON:0004572,5.63e-08,4;UBERON:0003104,4.05e-07,61;UBERON:0009142,4.05e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.11514624341466,0.183546752161682,0.782391344348039,0.436050312760893,1.31811709640683,6.02732687130279,0.419959264876088,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0.899899717281399,0,0,1.19840044207362,0.768436610643109,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0,0.860423876981386,2.03991400112325,2.15881276655127,2.59910566979068,4.03224198387602,0.561777680527007,0.170430322578058,0.259786004602869,1.06001872353102,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0.648540907100142,0.549122826376163,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,1.25578189465339,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0.354951612318675,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0.29551344712669,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.927471342481686|short_description=p@chr11:75229756..75229762,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2712 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:75229756..75229762,- | |||
|description=CAGE_peak_at_chr11:75229756..75229762,- | |||
|id=chr11:75229756..75229762,- | |||
|ontology_enrichment_celltype=CL:0002453!4.55e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.65e-24,5;CL:0002605,4.86e-16,2;CL:0002604,4.86e-16,2;CL:0000192,2.47e-10,3;CL:0000359,2.47e-10,3;CL:0002539,2.47e-10,3;CL:0000514,2.47e-10,3;CL:0002453,5.94e-09,8;CL:0000219,3.23e-08,54;CL:0002321,8.30e-08,70;CL:0000333,2.88e-07,10;CL:0000095,2.88e-07,10;CL:0000243,2.88e-07,10;CL:0000123,2.88e-07,10;CL:0000125,2.88e-07,10;CL:0000030,2.88e-07,10;CL:0000339,2.88e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.38e-15!22;UBERON:0007499!4.38e-15!22;UBERON:0006925!4.38e-15!22;UBERON:0009497!4.38e-15!22;UBERON:0000015!4.38e-15!22;UBERON:0002423!4.38e-15!22;UBERON:0006235!4.38e-15!22;UBERON:0008835!4.38e-15!22;UBERON:0003894!4.38e-15!22;UBERON:0004161!4.38e-15!22;UBERON:0008836!4.38e-15!22;UBERON:0002365!2.68e-14!25;UBERON:0002330!2.68e-14!25;UBERON:0009854!3.60e-14!23;UBERON:0009856!3.60e-14!23;UBERON:0003914!8.35e-11!47;UBERON:0005256!6.33e-10!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.75e-12,22;UBERON:0007499,4.75e-12,22;UBERON:0006925,4.75e-12,22;UBERON:0009497,4.75e-12,22;UBERON:0000015,4.75e-12,22;UBERON:0002423,4.75e-12,22;UBERON:0006235,4.75e-12,22;UBERON:0008835,4.75e-12,22;UBERON:0003894,4.75e-12,22;UBERON:0004161,4.75e-12,22;UBERON:0008836,4.75e-12,22;UBERON:0009854,1.62e-11,23;UBERON:0009856,1.62e-11,23;UBERON:0002365,1.42e-10,25;UBERON:0002330,1.42e-10,25;UBERON:0001135,2.47e-10,3;UBERON:0004237,2.47e-10,3;UBERON:0004695,2.47e-10,3;UBERON:0002111,2.47e-10,3;UBERON:0004178,2.47e-10,3;UBERON:0005256,6.80e-10,45;UBERON:0003914,1.91e-09,47;UBERON:0000947,5.63e-08,4;UBERON:0001637,5.63e-08,4;UBERON:0004573,5.63e-08,4;UBERON:0003509,5.63e-08,4;UBERON:0004571,5.63e-08,4;UBERON:0010191,5.63e-08,4;UBERON:0004572,5.63e-08,4;UBERON:0003104,4.05e-07,61;UBERON:0009142,4.05e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.11514624341466,0.183546752161682,0.782391344348039,0.436050312760893,1.31811709640683,6.02732687130279,0.419959264876088,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0.899899717281399,0,0,1.19840044207362,0.768436610643109,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0,0.860423876981386,2.03991400112325,2.15881276655127,2.59910566979068,4.03224198387602,0.561777680527007,0.170430322578058,0.259786004602869,1.06001872353102,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0.648540907100142,0.549122826376163,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,1.25578189465339,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0.354951612318675,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0.29551344712669,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.927471342481686 | |||
|short_description=p@chr11:75229756..75229762,- | |||
}} |
Latest revision as of 23:13, 3 August 2015
Short description: | p@chr11:75229756..75229762, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:75229756..75229762, - |
Coexpression cluster: | MCL_coexpression_mm9:2712 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.65e-24 | 5 |
astrocyte of the cerebral cortex | 4.86e-16 | 2 |
astrocyte of the hippocampus | 4.86e-16 | 2 |
smooth muscle cell | 2.47e-10 | 3 |
vascular associated smooth muscle cell | 2.47e-10 | 3 |
aortic smooth muscle cell | 2.47e-10 | 3 |
smooth muscle myoblast | 2.47e-10 | 3 |
oligodendrocyte precursor cell | 5.94e-09 | 8 |
motile cell | 3.23e-08 | 54 |
embryonic cell | 8.30e-08 | 70 |
migratory neural crest cell | 2.88e-07 | 10 |
neuron associated cell | 2.88e-07 | 10 |
glial cell (sensu Vertebrata) | 2.88e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.88e-07 | 10 |
glial cell | 2.88e-07 | 10 |
glioblast | 2.88e-07 | 10 |
glioblast (sensu Vertebrata) | 2.88e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 4.75e-12 | 22 |
epithelial sac | 4.75e-12 | 22 |
digestive gland | 4.75e-12 | 22 |
epithelium of foregut-midgut junction | 4.75e-12 | 22 |
anatomical boundary | 4.75e-12 | 22 |
hepatobiliary system | 4.75e-12 | 22 |
foregut-midgut junction | 4.75e-12 | 22 |
hepatic diverticulum | 4.75e-12 | 22 |
liver primordium | 4.75e-12 | 22 |
septum transversum | 4.75e-12 | 22 |
liver bud | 4.75e-12 | 22 |
digestive tract diverticulum | 1.62e-11 | 23 |
sac | 1.62e-11 | 23 |
exocrine gland | 1.42e-10 | 25 |
exocrine system | 1.42e-10 | 25 |
smooth muscle tissue | 2.47e-10 | 3 |
blood vessel smooth muscle | 2.47e-10 | 3 |
arterial system smooth muscle | 2.47e-10 | 3 |
artery smooth muscle tissue | 2.47e-10 | 3 |
aorta smooth muscle tissue | 2.47e-10 | 3 |
trunk mesenchyme | 6.80e-10 | 45 |
epithelial tube | 1.91e-09 | 47 |
aorta | 5.63e-08 | 4 |
artery | 5.63e-08 | 4 |
systemic artery | 5.63e-08 | 4 |
arterial blood vessel | 5.63e-08 | 4 |
systemic arterial system | 5.63e-08 | 4 |
aortic system | 5.63e-08 | 4 |
arterial system | 5.63e-08 | 4 |
mesenchyme | 4.05e-07 | 61 |
entire embryonic mesenchyme | 4.05e-07 | 61 |