FFCP PHASE1:Mm9::chr2:125861517..125861534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3307 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:125861517..125861534,+ | |||
|description=CAGE_peak_at_chr2:125861517..125861534,+ | |description=CAGE_peak_at_chr2:125861517..125861534,+ | ||
|id=chr2:125861517..125861534,+ | |id=chr2:125861517..125861534,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.44e-21,3;CL:0000359,2.44e-21,3;CL:0002539,2.44e-21,3;CL:0000514,2.44e-21,3;CL:0000680,5.52e-11,6;CL:0000187,5.52e-11,6;CL:0000056,5.52e-11,6;CL:0002293,7.57e-10,3;CL:0000222,1.71e-09,7;CL:0000355,1.69e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.27e-07!14;UBERON:0000117!3.27e-07!14;UBERON:0000171!3.27e-07!14;UBERON:0000170!3.27e-07!14;UBERON:0005597!3.27e-07!14;UBERON:0000118!3.27e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.44e-21,3;UBERON:0004237,2.44e-21,3;UBERON:0004695,2.44e-21,3;UBERON:0002111,2.44e-21,3;UBERON:0004178,2.44e-21,3;UBERON:0000947,3.57e-16,4;UBERON:0001637,3.57e-16,4;UBERON:0004573,3.57e-16,4;UBERON:0003509,3.57e-16,4;UBERON:0004571,3.57e-16,4;UBERON:0010191,3.57e-16,4;UBERON:0004572,3.57e-16,4;UBERON:0000055,4.59e-13,5;UBERON:0007500,4.59e-13,5;UBERON:0001981,4.59e-13,5;UBERON:0002049,4.59e-13,5;UBERON:0007798,4.59e-13,5;UBERON:0004537,4.59e-13,5;UBERON:0006965,4.59e-13,5;UBERON:0001723,2.54e-08,1;UBERON:0001033,2.54e-08,1;UBERON:0010056,2.54e-08,1;UBERON:0001134,1.69e-07,9;UBERON:0002036,1.69e-07,9;UBERON:0002385,1.69e-07,9;UBERON:0000486,1.69e-07,9;UBERON:0007503,1.69e-07,9;UBERON:0001015,1.69e-07,9;UBERON:0002329,1.69e-07,9;UBERON:0003082,1.69e-07,9;UBERON:0003059,1.69e-07,9;UBERON:0007282,1.69e-07,9;UBERON:0004290,1.69e-07,9;UBERON:0009618,1.69e-07,9;UBERON:0000383,8.50e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,5.5757312170733,2.0190142737785,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.757261933331841,0.226714680320357,0.289864488701678,0,0,0,0,0,0.561777680527007,4.94247935476367,3.63700406444016,6.00677276667578,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.647067399789637,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0.393528463494808,0,0,0,0,0.329119699826961,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.469380496577004,0.837531287209079,0.476087281772027,0.780534591431195,0.945810864637146,1.10732344824387,0.318909537314974,0.81931657357869,0.345369963731791,0.578596234326046,0,0,0,0,0,0,3.44263385291018,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.322928853391811,0.482503399425247,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76133805591944,0,0,0,0.965947970160952,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0,0.505394423527595,1.01391719956096,0.188626341386076,0.280924522409647,0.256100609619477,0.631790158511746,0.476293691283074,0.231768651889711,0.964546102318525,0,0.441596760403192,0,1.06485483695602,0.476872379894642,0.726732083161643,0.658765662907314,0.846146078916765,0.914639864363863,0,0.950628796921032,0.561142271657738,0.237270036248348,0.591026894253381,0,0.464810523557898,0.385813221962283,0.749431733813838,0.935726433781634,0.644613162144895,0.57386499620653,0.220591419119515,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,5.5757312170733,2.0190142737785,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.757261933331841,0.226714680320357,0.289864488701678,0,0,0,0,0,0.561777680527007,4.94247935476367,3.63700406444016,6.00677276667578,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.647067399789637,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0.393528463494808,0,0,0,0,0.329119699826961,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.469380496577004,0.837531287209079,0.476087281772027,0.780534591431195,0.945810864637146,1.10732344824387,0.318909537314974,0.81931657357869,0.345369963731791,0.578596234326046,0,0,0,0,0,0,3.44263385291018,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.322928853391811,0.482503399425247,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76133805591944,0,0,0,0.965947970160952,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0,0.505394423527595,1.01391719956096,0.188626341386076,0.280924522409647,0.256100609619477,0.631790158511746,0.476293691283074,0.231768651889711,0.964546102318525,0,0.441596760403192,0,1.06485483695602,0.476872379894642,0.726732083161643,0.658765662907314,0.846146078916765,0.914639864363863,0,0.950628796921032,0.561142271657738,0.237270036248348,0.591026894253381,0,0.464810523557898,0.385813221962283,0.749431733813838,0.935726433781634,0.644613162144895,0.57386499620653,0.220591419119515,0.927471342481686 | ||
|short_description=p@chr2:125861517..125861534,+ | |short_description=p@chr2:125861517..125861534,+ | ||
}} | }} |
Latest revision as of 23:01, 3 August 2015
Short description: | p@chr2:125861517..125861534, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:125861517..125861534, + |
Coexpression cluster: | MCL_coexpression_mm9:3307 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.44e-21 | 3 |
vascular associated smooth muscle cell | 2.44e-21 | 3 |
aortic smooth muscle cell | 2.44e-21 | 3 |
smooth muscle myoblast | 2.44e-21 | 3 |
muscle precursor cell | 5.52e-11 | 6 |
muscle cell | 5.52e-11 | 6 |
myoblast | 5.52e-11 | 6 |
epithelial cell of thymus | 7.57e-10 | 3 |
mesodermal cell | 1.71e-09 | 7 |
multi-potent skeletal muscle stem cell | 1.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.44e-21 | 3 |
blood vessel smooth muscle | 2.44e-21 | 3 |
arterial system smooth muscle | 2.44e-21 | 3 |
artery smooth muscle tissue | 2.44e-21 | 3 |
aorta smooth muscle tissue | 2.44e-21 | 3 |
aorta | 3.57e-16 | 4 |
artery | 3.57e-16 | 4 |
systemic artery | 3.57e-16 | 4 |
arterial blood vessel | 3.57e-16 | 4 |
systemic arterial system | 3.57e-16 | 4 |
aortic system | 3.57e-16 | 4 |
arterial system | 3.57e-16 | 4 |
vessel | 4.59e-13 | 5 |
epithelial tube open at both ends | 4.59e-13 | 5 |
blood vessel | 4.59e-13 | 5 |
vasculature | 4.59e-13 | 5 |
vascular system | 4.59e-13 | 5 |
blood vasculature | 4.59e-13 | 5 |
vascular cord | 4.59e-13 | 5 |
tongue | 2.54e-08 | 1 |
gustatory system | 2.54e-08 | 1 |
future tongue | 2.54e-08 | 1 |
skeletal muscle tissue | 1.69e-07 | 9 |
striated muscle tissue | 1.69e-07 | 9 |
muscle tissue | 1.69e-07 | 9 |
multilaminar epithelium | 1.69e-07 | 9 |
epithelial vesicle | 1.69e-07 | 9 |
musculature | 1.69e-07 | 9 |
somite | 1.69e-07 | 9 |
myotome | 1.69e-07 | 9 |
presomitic mesoderm | 1.69e-07 | 9 |
presumptive segmental plate | 1.69e-07 | 9 |
dermomyotome | 1.69e-07 | 9 |
trunk paraxial mesoderm | 1.69e-07 | 9 |
musculature of body | 8.50e-07 | 10 |